SPBC16G5.07c

Synonyms ChromosomeII
Productprohibitin (predicted) Gene Start4225758
Feature Typeprotein coding Gene End4223952
Name Description CDS Start4225342
Characterisation Statusconserved_unknown CDS End4224140

Ensembl Gene Location
SPBC16G5.02c SPBC16G5.03 mrpl23 SPBC16G5.05c SPBC16G5.06 > SPBC16G5.07c < SPNCRNA.1681 trp4 SPBC16G5.09 SPBC16G5.10
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
142257584225128
242250314224453
342244104223952

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF01145 Pfam Band 7 protein 54 225 99.3 3
117892 Superfamily 82 216 136.3 3
SM00244 Smart Band 7 protein 51 209 218.3 3
PR00721 Prints Stomatin 58 80 23.91 1
PR00721 Prints Stomatin 204 225 37.66 1
PR00721 Prints Stomatin 185 203 31.58 1
PR00721 Prints Stomatin 106 127 37.99 1
PR00721 Prints Stomatin 141 158 48.81 1
PR00721 Prints Stomatin 161 184 27.68 1

Protein Properties

Ave. residue weight 110.94 Da
Charge 9.50
Isoelectric point 9.53
Molecular weight 39.27 kDa
Number of residues 354
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viable
Temporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005739mitochondrionIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005739
( Interpro:IPR001972)ISS Interpro:IPR001972Temporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year reference

Species Distribution

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DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
no apparent S. cerevisiae orthologTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000055
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094


External References

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Database Identifier Description
NBRP SPBC16G5.07c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC16G5.07c Retrieval of eukaryotic orthologs
BioGrid SPBC16G5.07c BioGRID Interaction Datasets
Bähler Lab SPBC16G5.07c Cell Cycle Expression Profile
Bähler Lab SPBC16G5.07c Meiosis/Sporulation Expression Profies
Bähler Lab SPBC16G5.07c Pheromone response/mating expression profiles
Bähler Lab SPBC16G5.07c Environmental stress expression profiles
Bähler Lab SPBC16G5.07c Bähler Lab Transcriptome Viewer
Cyclebase SPBC16G5.07c Cell Cycle Data
Entrez Gene SPBC16G5.07c Link to Entrez Gene
SPD / RIKEN22/22A12Orfeome Localization Data
UniProtKB/SwissProtO60121Uncharacterized protein C16G5.07c
ArrayExpressO60121Link to ArrayExpress
RefSeq PeptideNP_596756prohibitin (predicted)
RefSeq mRNANM_001023776972h- prohibitin (predicted) (SPBC16G5.07c), mRNA
European Nucleotide ArchiveCU329671ENA EMBL mapping
European Nucleotide ArchiveCAA19027ENA Protein Mapping
UniParcUPI000006C346UniProt Archive

Literature for SPBC16G5.07c

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Search: UK PMC or PubMed