SPBC1703.03c

Synonyms ChromosomeII
Productarmadillo repeat protein, unknown biological role Gene Start2921101
Feature Typeprotein coding Gene End2918788
Name Description CDS Start2921047
Characterisation Statusconserved_unknown CDS End2918968

Ensembl Gene Location
nhm1 sld5 SPBC1703.01c rsc9 > SPBC1703.03c < mlh1 SPBC1703.05 SPNCRNA.1563 pof10
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
129211012920919
229208332918788

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF00514 Pfam Armadillo 67 105 24.9 5
48371 Superfamily 39 661 46 119
TMHMM tmhmm Double transmembrane domain 54 73 0.54059 1312
PS50176 PROSITE Armadillo 77 105 9.502 5

Protein Properties

Ave. residue weight 112.67 Da
Charge -25.50
Isoelectric point 4.48
Molecular weight 74.81 kDa
Number of residues 664
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634
GO:0005829cytosolIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005829

Protein Family

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DescriptionSourceAll Genes
armadillo repeat proteinTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0002380

Species Distribution

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DescriptionSourceAll Genes
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096

Manually Curated Orthologs

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SpeciesGeneDescription


External References

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Database Identifier Description
NBRP SPBC1703.03c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC1703.03c Retrieval of eukaryotic orthologs
BioGrid SPBC1703.03c BioGRID Interaction Datasets
Bähler Lab SPBC1703.03c Cell Cycle Expression Profile
Bähler Lab SPBC1703.03c Meiosis/Sporulation Expression Profies
Bähler Lab SPBC1703.03c Pheromone response/mating expression profiles
Bähler Lab SPBC1703.03c Environmental stress expression profiles
Bähler Lab SPBC1703.03c Bähler Lab Transcriptome Viewer
Cyclebase SPBC1703.03c Cell Cycle Data
Entrez Gene SPBC1703.03c Link to Entrez Gene
SPD / RIKEN37/37C10Orfeome Localization Data
UniProtKB/SwissProtQ9P7W7Uncharacterized ARM-like repeat-containing protein C1703.03c
ArrayExpressQ9P7W7Link to ArrayExpress
RefSeq PeptideNP_596198ARM-like repeat-containing protein
RefSeq mRNANM_001022117972h- ARM-like repeat-containing protein (SPBC1703.03c), mRNA
European Nucleotide ArchiveCU329671ENA EMBL mapping
European Nucleotide ArchiveCAB66447ENA Protein Mapping
UniParcUPI000006B097UniProt Archive

Literature for SPBC1703.03c

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Search: UK PMC or PubMed