Gene Standard NameUnassigned Characterisation Statusbiological_role_inferred
Systematic IDSPBC1718.04 Feature Typeprotein coding
Synonyms Name Description
Productglycerol-3-phosphate O-acyltransferase (predicted) Product Size675aa, 76.63 kDa
Genomic Location Chromosome II, 3475561-3478365 (2805nt); CDS:3475916-3477995 (2080nt)

Ensembl Gene Location
GO Molecular Function
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0004366glycerol-3-phosphate O-acyltransferase activityISOSGD:S000000107GO_REF:00000241
GO Biological Process
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0008654phospholipid biosynthetic processISOSGD:S000000107GO_REF:000002468
GO Cellular Component
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0005783endoplasmic reticulumIDAPMID:16823372594
GO:0016021integral component of membraneIEAUniProtKB-KW:KW-0812GO_REF:00000371016
Fission Yeast Phenotype Ontology

Population Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0002061inviable vegetative cell populationMicroscopySPBC1718.04ΔNullPECO:0000005, PECO:0000137PMID:236978061309

Cell Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0000311inviable after spore germination with normal, unseptated germ tube morphologyMicroscopySPBC1718.04ΔNullPECO:0000005, PECO:0000137PMID:23697806237
FYPO:0002151inviable sporeMicroscopySPBC1718.04ΔNullPECO:0000005, PECO:0000137PMID:23697806447
penetrance FYPO_EXT:0000001
Ensembl transcript structure with UTRs, exons and introns


Exon Start End


Region Start End Reference
Protein Features

Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID Database InterPro Description Start End Count
PF01553 Pfam IPR002123 Phospholipid/glycerol acyltransferase 25 247 4
SM00563 SMART IPR002123 Phospholipid/glycerol acyltransferase 40 250 4
TMhelix TMHMM 397 419 959
TMhelix TMHMM 451 473 959
TMhelix TMHMM 480 502 959
TMhelix TMHMM 5 22 959
PTHR31605 HMMPANTHER 1 672 1
PTHR31605:SF0 HMMPANTHER 1 672 1
SSF69593 SuperFamily 10 99 4
SSF69593 SuperFamily 191 294 4
Low complexity (SEG) seg 397 411
Low complexity (SEG) seg 422 436

View domain organization at Pfam

Sequence Ontology

Term IDTerm NameReferenceCount

Protein Properties

Ave. residue weight 113.52 Da
Charge 25.50
Isoelectric point 9.49
Molecular weight 76.63 kDa
Number of residues 675
Gene Expression

Quantitative Gene Expression

Protein Level

Molecules/Cell (average)DuringConditionScaleEvidenceReference
1980.73during GO:0072690PECO:0000005,
population_wideexperimental evidencePMID:23101633
NDduring cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
population_wideexperimental evidencePMID:23101633

RNA Level

Molecules/Cell (average)DuringConditionScaleEvidenceReference
3.1during GO:0072690PECO:0000005,
population_wideexperimental evidencePMID:23101633
0.71during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
population_wideexperimental evidencePMID:23101633
Species Distribution
predominantly single copy (one to one)3080
conserved in fungi4564

Manually curated orthologous groups


Orthologs in Compara

Physical Interactions

Source: BioGRID

Gene Product Evidence Reference
epe1Jmjc domain chromatin associated protein Epe1 Affinity Capture-MSPMID:24013502
hhp2serine/threonine protein kinase Hhp2 Affinity Capture-MSPMID:24055157
hhp1serine/threonine protein kinase Hhp1 Affinity Capture-MSPMID:24055157
External References
Database Identifier Description
NBRP SPBC1718.04 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC1718.04 Retrieval of eukaryotic orthologs (Bähler Lab)
BioGrid SPBC1718.04 BioGRID Interaction Datasets
Expression Viewer SPBC1718.04 Cell Cycle Expression Profile (Bähler Lab)
Expression Viewer SPBC1718.04 Meiosis/Sporulation Expression Profies (Bähler Lab)
Expression Viewer SPBC1718.04 Pheromone response/mating expression profiles (Bähler Lab)
Expression Viewer SPBC1718.04 Environmental stress expression profiles (Bähler Lab)
Pomb(A) SPBC1718.04 Polyadenylation Viewer (Gullerova lab)
pombeTV SPBC1718.04 Transcriptome Viewer (Bähler Lab)
Cyclebase SPBC1718.04 Cell Cycle Data
GEO SPBC1718.04 GEO profiles
PInt SPBC1718.04 Protein-Protein Interaction Predictor (Bähler Lab)
IntEnz2.3.1.15Integrated relational Enzyme database
Rhea2.3.1.15Annotated reactions database
EntrezGene2540110glycerol-3-phosphate O-acyltransferase (predicted)
WikiGene2540110glycerol-3-phosphate O-acyltransferase (predicted)
SPD / RIKEN46/46E05Orfeome Localization Data
UniProtKB/SwissProtQ9P7P0Uncharacterized acyltransferase C1718.04
ModBaseQ9P7P0Database of comparative protein structure models
StringQ9P7P0Network display of known and predicted interactions and functional associations
RefSeq PeptideNP_596450glycerol-3-phosphate O-acyltransferase (predicted)
RefSeq mRNANM_001022369972h- glycerol-3-phosphate O-acyltransferase (predicted) (SPBC1718.04), mRNA
European Nucleotide ArchiveCAB75994ENA Protein Mapping
UniParcUPI000006B46DUniProt Archive

Literature for SPBC1718.04

Search: Europe PMC or PubMed

Release Version: PomBase:21_41 - 24 Feb 2014