SPBC20F10.02c

Synonyms ChromosomeII
ProductDUF1741 family protein Gene Start3286488
Feature Typeprotein coding Gene End3284436
Name Description CDS Start3286420
Characterisation Statusconserved_unknown CDS End3284618

Ensembl Gene Location
SPBC25H2.03 trs1 SPNCRNA.1590 gar1 > SPBC20F10.02c < SPBC20F10.03 nse4 nrl1
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
132864883284436

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF08427 Pfam Domain of unknown function DUF1741 381 595 198.8 1

Protein Properties

Ave. residue weight 114.92 Da
Charge 5.00
Isoelectric point 7.30
Molecular weight 68.95 kDa
Number of residues 600
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634
GO:0005829cytosolIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005829

Species Distribution

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DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
no apparent S. cerevisiae orthologTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000055
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094


External References

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Database Identifier Description
NBRP SPBC20F10.02c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC20F10.02c Retrieval of eukaryotic orthologs
BioGrid SPBC20F10.02c BioGRID Interaction Datasets
Bähler Lab SPBC20F10.02c Cell Cycle Expression Profile
Bähler Lab SPBC20F10.02c Meiosis/Sporulation Expression Profies
Bähler Lab SPBC20F10.02c Pheromone response/mating expression profiles
Bähler Lab SPBC20F10.02c Environmental stress expression profiles
Bähler Lab SPBC20F10.02c Bähler Lab Transcriptome Viewer
Cyclebase SPBC20F10.02c Cell Cycle Data
Entrez Gene SPBC20F10.02c Link to Entrez Gene
SPD / RIKEN36/36E01Orfeome Localization Data
UniProtKB/SwissProtO42972UPF0588 membrane protein C20F10.02c
ArrayExpressO42972Link to ArrayExpress
RefSeq PeptideNP_596366DUF1741 family protein
RefSeq mRNANM_001022287972h- DUF1741 family protein (SPBC20F10.02c), mRNA
European Nucleotide ArchiveCU329671ENA EMBL mapping
European Nucleotide ArchiveCAA16842ENA Protein Mapping
UniParcUPI0000069F23UniProt Archive

Literature for SPBC20F10.02c

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Search: UK PMC or PubMed