csn1 (SPBC215.03c)


Gene Standard Namecsn1 Characterisation Statuspublished
Systematic IDSPBC215.03c Feature Typeprotein coding
Synonyms Name Description
ProductCOP9/signalosome complex subunit Csn1 Product Size422aa, 48.66 kDa
Genomic Location Chromosome II, 4029873-4027314 (2560nt); CDS:4029559-4028117 (1443nt)

Ensembl Gene Location
GO Biological Process
Term NameCount
cellular response to DNA damage stimulus211
Annotation ExtensionEvidenceWith/FromReference
cullin deneddylation6
Annotation ExtensionEvidenceWith/FromReference
protein catabolic process210
Annotation ExtensionEvidenceWith/FromReference
regulation of protein deneddylation1
Annotation ExtensionEvidenceWith/FromReference
GO Cellular Component
Term NameCount
COP9 signalosome7
Annotation ExtensionEvidenceWith/FromReference
cytosol2315
Annotation ExtensionEvidenceWith/FromReference
nucleus2740
Annotation ExtensionEvidenceWith/FromReference
Fission Yeast Phenotype Ontology
Gene Deletion Viability: Viable

Population Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0002619normal growth on sodium butyrateCell growth assaycsn1ΔNullPECO:0000005, PECO:0000201, PECO:0000142PMID:2386193755
FYPO:0002620normal growth on trichostatin ACell growth assaycsn1ΔNullPECO:0000005, PECO:0000201, PECO:0000142PMID:23861937110
FYPO:0001103resistance to hydrogen peroxide67
expressivity FYPO_EXT:0000001Cell growth assaycsn1ΔNullPECO:0000137PMID:19672306
FYPO:0001098sensitive to 4-nitroquinoline N-oxide159
expressivity FYPO_EXT:0000003Cell growth assaycsn1ΔNullPECO:0000137, PECO:0000005PMID:19264558
FYPO:0001701sensitive to bortezomib256
expressivity FYPO_EXT:0000002Cell growth assaycsn1ΔNullPECO:0000005, PECO:0000137PMID:21760946
FYPO:0000097sensitive to caffeine105
expressivity FYPO_EXT:0000001Cell growth assaycsn1ΔNullPECO:0000137PMID:19672306
FYPO:0000085sensitive to camptothecin211
expressivity FYPO_EXT:0000003Cell growth assaycsn1ΔNullPECO:0000137, PECO:0000005PMID:19264558
FYPO:0003559sensitive to doxorubicin91
expressivity FYPO_EXT:0000002Cell growth assaycsn1ΔNullPECO:0000137PMID:23365689
FYPO:0000088sensitive to hydroxyurea514
expressivity FYPO_EXT:0000002Cell Growth Assaycsn1ΔNullPECO:0000137, PECO:0000102PMID:23697806
FYPO:0000086sensitive to tacrolimus81
expressivity FYPO_EXT:0000003Cell growth assaycsn1ΔNullPECO:0000201, PECO:0000005, PECO:0000142PMID:21850271
FYPO:0000091sensitive to thiabendazolecompetitive growth assay evidencecsn1ΔNullPMID:20537132176
FYPO:0000268sensitive to UV during vegetative growthcompetitive growth assay evidencecsn1ΔNullPMID:20537132123
FYPO:0000115sensitive to valproic acid155
expressivity FYPO_EXT:0000003Cell growth assaycsn1ΔNullPECO:0000201, PECO:0000005, PECO:0000142PMID:23861937
FYPO:0002060viable vegetative cell populationMicroscopycsn1ΔNullPMID:204732893759
Microscopycsn1ΔNullPECO:0000005, PECO:0000137PMID:23697806

Cell Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0001914abnormal forespore membrane formationMicroscopycsn1ΔNullPMID:2472729124
FYPO:0003625abnormal microtubule cytoskeleton morphology during mitotic interphase186
penetrance FYPO_EXT:0000002experimental phenotypic evidencecsn1ΔNullPECO:0000005, PECO:0000103, PECO:0000137DOI:10.1016/j.devcel.2014.09.005
FYPO:0000059abnormal mitotic cell cycleMicroscopycsn1ΔNullPECO:0000005, PECO:0000137PMID:23697806686
FYPO:0000583abolished sporulationMicroscopycsn1ΔNullPMID:2472729151
FYPO:0000708decreased mating efficiencyhigh throughput nucleotide sequencing assay evidencecsn1ΔNullPECO:0000015PMID:23950735240
FYPO:0000538decreased protein secretion14
affecting pho1
expressivity FYPO_EXT:0000002
Enzyme assay datacsn1ΔNullPECO:0000142, PECO:0000126, PECO:0000224, PECO:0000005, PECO:0000226, PECO:0000225PMID:21850271
FYPO:0001122elongated vegetative cellMicroscopycsn1ΔNullPMID:11504566685
FYPO:0001492viable elongated vegetative cell221
penetrance FYPO_EXT:0000001Microscopycsn1ΔNullPECO:0000005, PECO:0000137PMID:23697806
FYPO:0002197viable vegetative cell with abnormal cell shape467
penetrance FYPO_EXT:0000001experimental phenotypic evidencecsn1ΔNullPECO:0000005, PECO:0000103, PECO:0000137DOI:10.1016/j.devcel.2014.09.005
Transcript
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
140298734029499
240294394029165
340290904028347
440283054027314

UTRs

Region Coordinates Reference
five_prime_UTR4029873..4029560PMID:21511999
three_prime_UTR4028116..4027314PMID:21511999
Protein Features

Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID Database InterPro Description Start End Count
PF01399 Pfam IPR000717 Proteasome component (PCI) domain 262 365 15
PF10602 Pfam IPR019585 26S proteasome, regulatory subunit Rpn7 77 245 2
SM00088 SMART IPR000717 Proteasome component (PCI) domain 298 387 13
PTHR14145:SF2 HMMPANTHER 11 365 1
PTHR14145 HMMPANTHER 11 365 2
1.10.10.10 Gene3D IPR011991 Winged helix-turn-helix DNA-binding domain 297 371 46
1.25.40.10 Gene3D IPR011990 Tetratricopeptide-like helical 117 213 62
SSF46785 SuperFamily 293 370 49
SSF48452 SuperFamily 114 213 50
Coil ncoils Rabaptin coiled-coil domain 89 113 968

View domain organization at Pfam

Protein Properties

Ave. residue weight 115.30 Da
Charge -12.50
Isoelectric point 4.79
Molecular weight 48.66 kDa
Number of residues 422
Modifications

Protein Modifications

Term IDTerm NameEvidenceResidueReferenceCount
MOD:00046O-phospho-L-serineexperimental evidenceS367PMID:247631071670
Sequence
Gene Expression

Quantitative Gene Expression

Protein Level

Molecules/Cell (average)ExtensionConditionScaleEvidenceReference
7686during GO:0000080PECO:0000126,
PECO:0000005
single_cellmass spectrometry evidencePMID:24763107
8321during GO:0000084PECO:0000126,
PECO:0000005
single_cellmass spectrometry evidencePMID:24763107
8458during GO:0000085PECO:0000126,
PECO:0000005
single_cellmass spectrometry evidencePMID:24763107
8281during GO:0000087PECO:0000126,
PECO:0000005
single_cellmass spectrometry evidencePMID:24763107
834.11during GO:0072690PECO:0000005,
PECO:0000014
population_wideexperimental evidencePMID:23101633
7451during GO:0072690PECO:0000126,
PECO:0000005
single_cellmass spectrometry evidencePMID:24763107
NDduring cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127
population_wideexperimental evidencePMID:23101633

RNA Level

Molecules/Cell (average)ExtensionConditionScaleEvidenceReference
1.2during GO:0072690PECO:0000005,
PECO:0000014
population_wideexperimental evidencePMID:23101633
0.44during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127
population_wideexperimental evidencePMID:23101633
Species Distribution
DescriptionQualifierReferenceCount
no apparent S. cerevisiae ortholog602
predominantly single copy (one to one)3092
conserved in fungi4600
conserved in eukaryotes4514
conserved in metazoa3425
conserved in vertebrates3400
conserved in eukaryotes only2497
Orthologs

Manually curated orthologous groups

SpeciesGeneDescriptionLinksCount

Orthologs in Compara


Physical Interactions

Source: BioGRID

View all interactions in esyN
View the HCPIN interactions in esyN

Gene Product Evidence Reference
cdt2WD repeat protein Cdt2 Affinity Capture-MSPMID:16252005
Affinity Capture-Western
ddb1damaged DNA binding protein Ddb1 Affinity Capture-WesternPMID:16252005
ubp12CSN-associated deubiquitinating enzyme Ubp12 Affinity Capture-WesternPMID:12718879
cul3cullin 3 Biochemical ActivityPMID:11504566
cul1cullin 1 Affinity Capture-MSPMID:23535663
Affinity Capture-WesternPMID:12183637
csn2COP9/signalosome complex subunit Csn2 Affinity Capture-WesternPMID:11854407
Genetic Interactions

Source: BioGRID

View these interactions in esyN

Gene Product Evidence Reference
tal1transaldolase (predicted) Positive GeneticPMID:22681890
yaf9YEATS family histone acetyltransferase subunit Yaf9 Negative GeneticPMID:18818364
rps110240S ribosomal protein S11 (predicted) Negative GeneticPMID:22681890
pmc1mediator complex subunit Pmc1 Negative GeneticPMID:18818364
mph1dual specificity protein kinase Mph1 Synthetic Growth DefectPMID:18931302
Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
bdc1bromodomain containing protein 1, Bdc1 Negative GeneticPMID:18818364
mms19Dos2 silencing complex subunit Mms19 Negative GeneticPMID:22681890
SPBC651.04Schizosaccharomyces specific protein Negative GeneticPMID:22681890
rad9checkpoint clamp complex protein Rad9 Synthetic Growth DefectPMID:18931302
Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
SPAC824.09cGTPase activating protein (predicted) Negative GeneticPMID:22681890
pef1Pho85/PhoA-like cyclin-dependent kinase Pef1 Negative GeneticPMID:22681890
SPCC16C4.106-phosphogluconolactonase (predicted) Positive GeneticPMID:22681890
pof9F-box protein Pof9 Negative GeneticPMID:22681890
ebs1EST1 family nonsense-mediated mRNA decay (NMD) pathway protein Ebs1 (predicted) Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
not3CCR4-Not complex subunit Not3/5 (predicted) Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
ctf18RFC-like complex subunit Ctf18 Synthetic Growth DefectPMID:18931302
Negative GeneticPMID:18818364
rrf1mitochondrial translation termination factor Rrf1 Positive GeneticPMID:22681890
SPAC29E6.09Schizosaccharomyces specific protein Negative GeneticPMID:22681890
rad1checkpoint clamp complex protein Rad1 Negative GeneticPMID:22681890
mrpl39mitochondrial ribosomal protein subunit L39 (predicted) Positive GeneticPMID:22681890
dad2DASH complex subunit Dad2 Negative GeneticPMID:18818364
rap1telomere binding protein Rap1 Negative GeneticPMID:22681890
rtn1reticulon-like protein Rtn1 Negative GeneticPMID:22681890
klp6kinesin-like protein Klp6 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
stp1protein tyrosine phosphatase Stp1 Positive GeneticPMID:18818364
pzh1serine/threonine protein phosphatase Pzh1 Positive GeneticPMID:22681890
rad17RFC related checkpoint protein Rad17 Synthetic Growth DefectPMID:18931302
Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
trm112protein and tRNA methyltransferase regulatory subunit Trm112 (predicted) Negative GeneticPMID:22681890
ccr4CCR4-Not complex subunit Ccr4 (predicted) Negative GeneticPMID:22681890
dad3DASH complex subunit Dad3 Negative GeneticPMID:22681890
alp13MRG family Clr6 histone deacetylase complex subunit Alp13 Negative GeneticPMID:22681890
vht1vitamin H transporter Vht1 Negative GeneticPMID:22681890
nse5Smc5-6 complex non-SMC subunit Nse5 Synthetic Growth DefectPMID:18931302
hip4histone promoter control protein Hip4 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
pac2cAMP-independent regulatory protein Pac2 Negative GeneticPMID:22681890
nse6Smc5-6 complex non-SMC subunit Nse6 Synthetic Growth DefectPMID:18931302
Negative GeneticPMID:22681890
fsc1fasciclin domain protein Fsc1 Positive GeneticPMID:22681890
idp1isocitrate dehydrogenase Idp1 (predicted) Negative GeneticPMID:22681890
rrg9mitochondrial genome maintenance protein Rrg9 (predicted) Negative GeneticPMID:22681890
SPCC285.10cSPRY domain protein Positive GeneticPMID:22681890
SPBC36.10mitochondrial intermembrane space protein; involved in phospholipid metabolism (predicted) Negative GeneticPMID:22681890
swi6HP1 family chromodomain protein Swi6 Synthetic Growth DefectPMID:18931302
pof3F-box protein Pof3 Synthetic Growth DefectPMID:18931302
prw1Clr6 histone deacetylase complex subunit Prw1 Negative GeneticPMID:22681890
prz1calcineurin responsive transcription factor Prz1 Negative GeneticPMID:22681890
SPBC4B4.04translation initiation factor eIF2A (predicted) Negative GeneticPMID:18818364
hus1checkpoint clamp complex protein Hus1 Synthetic Growth DefectPMID:18931302
Negative GeneticPMID:18818364
clr3histone deacetylase (class II) Clr3 Synthetic Growth DefectPMID:18931302
Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
tlg2SNARE Tlg2 (predicted) Synthetic Growth DefectPMID:18931302
sum2G2/M transition checkpoint protein Sum2 Positive GeneticPMID:18818364
SPAC1F3.03Lgl family protein (predicted) Negative GeneticPMID:22681890
mso1endocytic docking protein Mso1 Negative GeneticPMID:22681890
pab2poly(A) binding protein Pab2 Negative GeneticPMID:18818364
Positive GeneticPMID:22681890
brc1BRCT domain protein Brc1 Negative GeneticPMID:22681890
rnh201ribonuclease H2 complex subunit Rnh201 (predicted) Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
fml1ATP-dependent 3' to 5' DNA helicase, FANCM ortholog Fml1 Negative GeneticPMID:18818364
rxt2histone deacetylase complex subunit Rxt2 Negative GeneticPMID:22681890
caf4CCR4-Not complex subunit Caf4/Mdv1 (predicted) Positive GeneticPMID:18818364
cid12poly(A) polymerase Cid12 Negative GeneticPMID:18818364
Positive GeneticPMID:22681890
ath1ataxin-2 homolog Positive GeneticPMID:22681890
ctp1CtIP-related endonuclease Negative GeneticPMID:22681890
SPCC16C4.20cHMG box protein (predicted) Negative GeneticPMID:22681890
hob3BAR adaptor protein Hob3 Negative GeneticPMID:22681890
SPAC5H10.04NADPH dehydrogenase (predicted) Negative GeneticPMID:22681890
dbl8tRNA-splicing endonuclease positive effector Dbl8 Negative GeneticPMID:18818364
gmh5alpha-1,2-galactosyltransferase (predicted) Negative GeneticPMID:22681890
rad26ATRIP, ATR checkpoint kinase regulatory subunit Rad26 Synthetic Growth DefectPMID:18931302
Negative GeneticPMID:18818364
arb1argonaute inhibitor protein 1 Negative GeneticPMID:22681890
jmj2histone demethylase Jmj2 Positive GeneticPMID:18818364
SPCC70.03cproline dehydrogenase (predicted) Negative GeneticPMID:22681890
mug80cyclin Clg1 (predicted) Negative GeneticPMID:22681890
cph1Clr6 histone deacetylase associated PHD protein-1 Cph1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
spo20sec14 cytosolic factor family Sec14 Negative GeneticPMID:22681890
SPCC736.02Schizosaccharomyces specific protein Negative GeneticPMID:22681890
sck2serine/threonine protein kinase Sck2 Positive GeneticPMID:24463365
dcc1Ctf18 RFC-like complex subunit Dcc1 Negative GeneticPMID:22681890
atp11F1-ATPase chaperone Atp11 (predicted) Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
pob3FACT complex subunit Pob3 Negative GeneticPMID:18818364
fft3SMARCAD1 family ATP-dependent DNA helicase Fft3 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
srb10cyclin-dependent protein Srb mediator subunit kinase Srb10 Positive GeneticPMID:22681890
sgf29SAGA complex subunit Sgf29 Negative GeneticPMID:18818364
SPBC13E7.07Schizosaccharomyces specific protein Negative GeneticPMID:22681890
pht1histone H2A variant H2A.Z, Pht1 Positive GeneticPMID:22681890
SPAC1805.14Schizosaccharomyces specific protein Negative GeneticPMID:22681890
SPAC17H9.04cRNA-binding protein Negative GeneticPMID:22681890
rpt419S proteasome regulatory subunit Rpt4 (predicted) Negative GeneticPMID:22681890
mre11Mre11 nuclease Negative GeneticPMID:18818364
rpl380160S ribosomal protein L38 (predicted) Negative GeneticPMID:22681890
air1zinc knuckle TRAMP complex subunit Air1 Negative GeneticPMID:18818364
saf5splicing factor Positive GeneticPMID:22681890
SPAPB1E7.11cSchizosaccharomyces specific protein Negative GeneticPMID:22681890
SPAC688.12cSchizosaccharomyces specific protein Positive GeneticPMID:22681890
coq5C-methyltransferase (predicted) Positive GeneticPMID:22681890
ryh1GTPase Ryh1 Synthetic Growth DefectPMID:18931302
tsc2tuberin Negative GeneticPMID:22681890
mus7DNA repair protein Mus7/Mms22 Synthetic Growth DefectPMID:18931302
ase1antiparallel microtubule cross-linking factor Ase1 Negative GeneticPMID:22681890
sce3translation initiation factor (predicted) Positive GeneticPMID:22681890
hta1histone H2A alpha Negative GeneticPMID:22681890
spd1ribonucleotide reductase (RNR) inhibitor Phenotypic SuppressionPMID:24652833
Synthetic Rescue
Phenotypic SuppressionPMID:15805471
Positive GeneticPMID:22681890
arp8actin-like protein, Ino80 complex subunit Arp8 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
iwr1RNA polymerase II nuclear import protein Iwr1 (predicted) Positive GeneticPMID:18818364
nup132nucleoporin Nup132 Negative GeneticPMID:22681890
rpa12DNA-directed RNA polymerase complex I subunit Rpa12 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
SPCC1259.08conserved fungal protein, DUF2457 family Negative GeneticPMID:22681890
SPAC222.14cGTP binding protein Sey1 (predicted) Negative GeneticPMID:22681890
SPBC839.03cneddylation protein Dcn1 (predicted) Positive GeneticPMID:18818364
pmt3SUMO Negative GeneticPMID:22681890
SPCC18.17cproteasome assembly chaperone (predicted) Negative GeneticPMID:22681890
hrp1ATP-dependent DNA helicase Hrp1 Negative GeneticPMID:18818364
laf1clr6 L associated factor 1 Laf1 Negative GeneticPMID:18818364
nup60nucleoporin Nup60 Negative GeneticPMID:18818364
hmo1HMG box protein Hmo1 Negative GeneticPMID:18818364
apq12nuclear membrane organization protein Apq12 (predicted) Negative GeneticPMID:22681890
SPBC11B10.08WW domain containing conserved fungal protein Negative GeneticPMID:22681890
pdp1PWWP domain protein Pdp1 Negative GeneticPMID:18818364
spc19DASH complex subunit Spc19 Negative GeneticPMID:22681890
epe1Jmjc domain chromatin associated protein Epe1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
not2CCR4-Not complex subunit Not2 (predicted) Negative GeneticPMID:18818364
chk1Chk1 protein kinase Synthetic Growth DefectPMID:18931302
tom70mitochondrial TOM complex subunit Tom70 (predicted) Positive GeneticPMID:22681890
arp42SWI/SNF and RSC complex subunit Arp42 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
cph2Clr6 histone deacetylase associated PHD protein-2 Cph2 Negative GeneticPMID:22681890
chp1chromodomain protein Chp1 Positive GeneticPMID:22681890
ngg1SAGA complex subunit Ngg1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
sen1ATP-dependent 5' to 3' DNA/RNA helicase Sen1 Negative GeneticPMID:22681890
vph2endoplasmic reticulum membrane protein involved in assembly of the V-ATPase (predicted) Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
gcn5SAGA complex histone acetyltransferase catalytic subunit Gcn5 Negative GeneticPMID:18818364
mrc1mediator of replication checkpoint 1 Synthetic Growth DefectPMID:18931302
ypt4GTPase Ypt4 Negative GeneticPMID:22681890
mms1E3 ubiquitin ligase complex subunit Mms1 (predicted) Negative GeneticPMID:22681890
pho24-nitrophenylphosphatase Positive GeneticPMID:18818364
swd2Set1C complex subunit Swd2.1 Negative GeneticPMID:18818364
scs7sphingosine hydroxylase Scs7 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
shk2PAK-related kinase Shk2 Synthetic Growth DefectPMID:18931302
rps2340S ribosomal protein S23 (predicted) Negative GeneticPMID:22681890
dad1DASH complex subunit Dad1 Negative GeneticPMID:22681890
lsk1P-TEFb-associated cyclin-dependent protein kinase Lsk1 Negative GeneticPMID:18818364
xap5xap-5-like protein Negative GeneticPMID:24957674
mid1medial ring protein Mid1 Negative GeneticPMID:22681890
mik1mitotic inhibitor kinase Mik1 Negative GeneticPMID:22681890
hat1histone acetyltransferase Hat1 Negative GeneticPMID:22681890
SPAC139.01cnuclease, XP-G family (predicted) Positive GeneticPMID:22681890
erd1Erd1 homolog (predicted) Negative GeneticPMID:22681890
rcd1RNA-binding protein, CCR4-NOT complex subunit Rcd1 Negative GeneticPMID:18818364
ssb3DNA replication factor A subunit Ssb3 Negative GeneticPMID:22681890
SPBC725.01aspartate aminotransferase (predicted) Negative GeneticPMID:22681890
moc3transcription factor Moc3 Negative GeneticPMID:22681890
slx9ribosome biogenesis protein Slx9 (predicted) Negative GeneticPMID:18818364
SPBC16H5.13WD repeat protein, human WDR7 ortholog Negative GeneticPMID:18818364
ask1DASH complex subunit Ask1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
hrq1RecQ type DNA helicase Hrq1 (predicted) Negative GeneticPMID:22681890
pop2F-box/WD repeat protein Pop2 Negative GeneticPMID:22681890
rad3ATR checkpoint kinase Rad3 Synthetic Growth DefectPMID:18931302
Negative GeneticPMID:22681890
swr1SNF2 family helicase Swr1 Positive GeneticPMID:18818364
mug154conserved fungal protein Negative GeneticPMID:18818364
snt2Lid2 complex subunit Snt2 Negative GeneticPMID:22681890
mcl1DNA polymerase alpha accessory factor Mcl1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
upf3up-frameshift suppressor 3 family protein (predicted) Negative GeneticPMID:22681890
cds1replication checkpoint kinase Cds1 Negative GeneticPMID:18818364
ppr2mitochondrial PPR repeat protein Ppr2 Positive GeneticPMID:22681890
rhp14XP-A family homolog Rhp14 Negative GeneticPMID:18818364
mex67mRNA export receptor, Tap, nucleoporin Mex67 Negative GeneticPMID:22681890
bio2biotin synthase Negative GeneticPMID:22681890
SPCC1235.01Schizosaccharomyces specific protein Negative GeneticPMID:22681890
top1DNA topoisomerase I Synthetic Growth DefectPMID:18931302
Negative GeneticPMID:18818364
hmt2sulfide-quinone oxidoreductase Positive GeneticPMID:22681890
amk2AMP-activated protein kinase beta subunit Amk2 Negative GeneticPMID:18818364
rpl210260S ribosomal protein L21 (predicted) Negative GeneticPMID:22681890
clr2chromatin silencing protein Clr2 Negative GeneticPMID:22681890
raf1CLRC ubiquitin E3 ligase complex specificiy factor Raf1/Dos1 Negative GeneticPMID:22681890
ssu72phosphoric ester hydrolase Ssu72 (predicted) Negative GeneticPMID:18818364
spa2GTPase activating protein Spa2 (predicted) Synthetic Growth DefectPMID:18931302
dsc4Golgi Dsc E3 ligase complex subunit Dsc3 Negative GeneticPMID:22681890
rpl230160S ribosomal protein L23 Negative GeneticPMID:22681890
omt24-alpha-hydroxytetrahydrobiopterin dehydratase (predicted) Negative GeneticPMID:22681890
swi3replication fork protection complex subunit Swi3 Synthetic Growth DefectPMID:18931302
dni2tetraspan protein Dni2 (predicted) Negative GeneticPMID:22681890
alg9mannosyltransferase complex subunit Alg9 (predicted) Negative GeneticPMID:22681890
SPAP8A3.07cphospho-2-dehydro-3-deoxyheptonate aldolase (predicted) Positive GeneticPMID:22681890
pof2F-box protein Pof2 Negative GeneticPMID:22681890
External References
Database Identifier Description
NBRP SPBC215.03c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC215.03c Retrieval of eukaryotic orthologs (Bähler Lab)
BioGrid SPBC215.03c BioGRID Interaction Datasets
Expression Viewer SPBC215.03c Cell Cycle Expression Profile (Bähler Lab)
Expression Viewer SPBC215.03c Meiosis/Sporulation Expression Profies (Bähler Lab)
Expression Viewer SPBC215.03c Pheromone response/mating expression profiles (Bähler Lab)
Expression Viewer SPBC215.03c Environmental stress expression profiles (Bähler Lab)
Pomb(A) SPBC215.03c Polyadenylation Viewer (Gullerova lab)
pombeTV SPBC215.03c Transcriptome Viewer (Bähler Lab)
Cyclebase SPBC215.03c Cell Cycle Data
GEO SPBC215.03c GEO profiles
PInt SPBC215.03c Protein-Protein Interaction Predictor (Bähler Lab)
PeptideAtlas SPBC215.03c Peptides identified in tandem mass spectrometry proteomics experiments
SYSGRO SPBC215.03c Fission yeast phenotypic data & analysis
SPD / RIKEN23/23C05Orfeome Localization Data
UniProtKB/SwissProtO94308COP9 signalosome complex subunit 1
ModBaseO94308Database of comparative protein structure models
STRINGO94308Network display of known and predicted interactions and functional associations
RefSeq PeptideNP_596680COP9/signalosome complex subunit Csn1
RefSeq mRNANM_001022603972h- COP9/signalosome complex subunit Csn1 (csn1), mRNA
European Nucleotide ArchiveAAG29548.1ENA Protein Mapping
European Nucleotide ArchiveBAA87087.1ENA Protein Mapping
European Nucleotide ArchiveCAA22117.1ENA Protein Mapping
UniParcUPI000006B11EUniProt Archive

Literature for csn1

Search: Europe PMC or PubMed

Release Version: PomBase:23_47 - 27 Oct 2014