SPBC21C3.12c

Synonyms ChromosomeII
ProductDUF953 family protein Gene Start3817780
Feature Typeprotein coding Gene End3816890
Name Description CDS Start3817415
Characterisation Statusconserved_unknown CDS End3817041

Ensembl Gene Location
car2 SPBC21C3.09c SPNCRNA.1643 SPBC21C3.10c SPBTRNALYS.09 SPBTRNATYR.04 ubx4 > SPBC21C3.12c < rps1901 SPBC21C3.14c SPBC21C3.15c spt4
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
138177803816890

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF06110 Pfam Protein of unknown function DUF953, thioredoxin-like 9 99 55.5 1
52833 Superfamily 18 91 34.8 38

Protein Properties

Ave. residue weight 112.36 Da
Charge 6.00
Isoelectric point 9.76
Molecular weight 13.93 kDa
Number of residues 124
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634
GO:0005829cytosolIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005829

Protein Family

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DescriptionSourceAll Genes
thioredoxin familyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000261

Species Distribution

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DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
no apparent S. cerevisiae orthologTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000055
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094

Manually Curated Orthologs

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SpeciesGeneDescription


External References

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Database Identifier Description
NBRP SPBC21C3.12c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC21C3.12c Retrieval of eukaryotic orthologs
BioGrid SPBC21C3.12c BioGRID Interaction Datasets
Bähler Lab SPBC21C3.12c Cell Cycle Expression Profile
Bähler Lab SPBC21C3.12c Meiosis/Sporulation Expression Profies
Bähler Lab SPBC21C3.12c Pheromone response/mating expression profiles
Bähler Lab SPBC21C3.12c Environmental stress expression profiles
Bähler Lab SPBC21C3.12c Bähler Lab Transcriptome Viewer
Cyclebase SPBC21C3.12c Cell Cycle Data
Entrez Gene SPBC21C3.12c Link to Entrez Gene
SPD / RIKEN02/02F12Orfeome Localization Data
UniProtKB/SwissProtQ9P7L1Thioredoxin domain-containing protein C21C3.12c
ArrayExpressQ9P7L1Link to ArrayExpress
RefSeq PeptideNP_596592DUF953 family protein
RefSeq mRNANM_001022512972h- DUF953 family protein (SPBC21C3.12c), mRNA
European Nucleotide ArchiveCU329671ENA EMBL mapping
European Nucleotide ArchiveCAB76048ENA Protein Mapping
UniParcUPI000006A1BBUniProt Archive

Literature for SPBC21C3.12c

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Search: UK PMC or PubMed