SPBC26H8.04c

Synonyms ChromosomeII
ProductDEP domain protein Gene Start3953924
Feature Typeprotein coding Gene End3948910
Name Description CDS Start3953675
Characterisation Statusconserved_unknown CDS End3949185

Ensembl Gene Location
sec9 SPNCRNA.1650 snoR68 cho2 > SPBC26H8.04c < SPBC26H8.05c SPNCRNA.431 grx4 snu32
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
139539243948910

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF00610 Pfam DEP domain 1121 1189 67.3 5
PF12257 Pfam Protein of unknown function DUF3608 121 250 146.5 1
PF12257 Pfam Protein of unknown function DUF3608 288 425 116.6 1
46785 Superfamily 1099 1199 81.7 43
SM00049 Smart DEP domain 1117 1191 94.7 5
PS50186 PROSITE DEP domain 1116 1191 14.038 3


Protein Modifications

Term IDDescriptionSourceAll Genes
MOD:00696phosphorylated residue
Temporary processing gif - replaced by AJAX with count of genes annotated with the term MOD:00696

Protein Properties

Ave. residue weight 113.63 Da
Charge 17.50
Isoelectric point 7.47
Molecular weight 169.99 kDa
Number of residues 1496
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Species Distribution

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DescriptionSourceAll Genes
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096

Manually Curated Orthologs

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SpeciesGeneDescription


External References

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Database Identifier Description
NBRP SPBC26H8.04c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC26H8.04c Retrieval of eukaryotic orthologs
BioGrid SPBC26H8.04c BioGRID Interaction Datasets
Bähler Lab SPBC26H8.04c Cell Cycle Expression Profile
Bähler Lab SPBC26H8.04c Meiosis/Sporulation Expression Profies
Bähler Lab SPBC26H8.04c Pheromone response/mating expression profiles
Bähler Lab SPBC26H8.04c Environmental stress expression profiles
Bähler Lab SPBC26H8.04c Bähler Lab Transcriptome Viewer
Cyclebase SPBC26H8.04c Cell Cycle Data
Entrez Gene SPBC26H8.04c Link to Entrez Gene
SPD / RIKEN30/30H06Orfeome Localization Data
UniProtKB/SwissProtO74788Vacuolar membrane-associated protein iml1
ArrayExpressO74788Link to ArrayExpress
RefSeq PeptideNP_596645DEP domain protein
RefSeq mRNANM_001022567972h- DEP domain protein (SPBC26H8.04c), mRNA
European Nucleotide ArchiveCU329671ENA EMBL mapping
European Nucleotide ArchiveCAA21096ENA Protein Mapping
UniParcUPI000006B87FUniProt Archive

Literature for SPBC26H8.04c

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Search: UK PMC or PubMed