atf1 (SPBC29B5.01)


Gene Standard Nameatf1 Characterisation Statuspublished
Systematic IDSPBC29B5.01 Feature Typeprotein coding
Synonymsgad7, mts1, SPNCRNA.353, SPNG1409, sss1 Name DescriptionG1 Arrest Defective
Producttranscription factor, Atf-CREB family Atf1 Product Size566aa, 59.71 kDa
Genomic Location Chromosome II, 1546194-1549862 (3669nt); CDS:1547661-1549361 (1701nt)

Ensembl Gene Location
GO Molecular Function
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0003723RNA bindingIDAPMID:7518718646
GO:0000978RNA polymerase II core promoter proximal region sequence-specific DNA bindingIDAPMID:1544813791
at M26_binding_siteIDAPMID:15448137
at iron_repressed_GATA_elementIDAPMID:9135083
binds CREIDAPMID:9135083
IDAPMID:8557039
GO:0001077RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription28
regulates sro1IMPPMID:18410345
during regulation of transcription from RNA polymerase II promoter in response to oxidative stress, regulates hsr1IMPPMID:18003976
during cellular response to heat, regulates ntp1IMPPMID:15164362
during cellular response to cadmium ion, regulates ntp1IMPPMID:15164362
regulates gpx1IMPPMID:10455235
regulates ish1IMPPMID:11751918
during cellular response to glucose starvation, regulates gpx1, in presence of maltoseIMPPMID:24224056
during cellular response to glucose starvation, regulates fbp1, in presence of maltoseIMPPMID:24224056
regulates gsa1IMPPMID:12787490
regulates ecm33IMPPMID:20032302
during cellular response to glucose starvation, regulates agl1, in presence of maltoseIMPPMID:24224056
GO:0005515protein bindingIPIatf1PMID:8824587831
IPIsty1PMID:8824587
GO:0046982protein heterodimerization activityIPIpcr1PMID:91350832
GO:0010844recombination hotspot bindingIDAPMID:79588492
GO:0043565sequence-specific DNA bindingIDAPMID:7958849137
GO Biological Process
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0010846activation of reciprocal meiotic recombinationIMPPMID:93911011
GO:0006995cellular response to nitrogen starvationIMPPMID:1544813786
GO:0009267cellular response to starvation115
requiredIMPPMID:8557039
requiredIMPPMID:9135083
GO:0031990mRNA export from nucleus in response to heat stressIMPPMID:158409443
GO:1990376negative regulation of G1/S transition of mitotic cell cycle by positive regulation of transcription from RNA polymerase II promoter in response to nitrogen starvationIMPPMID:91350832
GO:0060195negative regulation of antisense RNA transcriptionIMPPMID:251227511
GO:0045128negative regulation of reciprocal meiotic recombinationIMPPMID:183759813
GO:0061417negative regulation of transcription from RNA polymerase II promoter in response to oxidative stress1
regulates bfr1IMPPMID:9585505
GO:0016584nucleosome positioningIMPPMID:251227514
GO:0045944positive regulation of transcription from RNA polymerase II promoterIMPPMID:2422405687
GO:0045893positive regulation of transcription, DNA-templated95
during meiotic cell cycleIDAPMID:8557039
GO:0043949regulation of cAMP-mediated signalingIMPPMID:154481378
GO:1900411regulation of histone acetylation by regulation of transcription from RNA polymerase II promoterIMPPMID:152181501
GO:1900412regulation of histone methylation by regulation of transcription from RNA polymerase II promoterIMPPMID:152181501
GO:0006366transcription from RNA polymerase II promoterIMPPMID:11751918335
GO Cellular Component
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:1990243atf1-pcr1 complexIGIpcr1PMID:242240562
GO:0005634nucleusIDAPMID:168233722740
GO:0005667transcription factor complex61
localization requires pcr1IDAPMID:9135083
Fission Yeast Phenotype Ontology
Gene Deletion Viability: Viable

Population Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0002924decreased cell population growth on maltose carbon sourceCell growth assayatf1ΔNullPECO:0000236PMID:242240563
FYPO:0000674normal cell population growth at high temperatureCell growth assayatf1ΔNullPECO:0000137, PECO:0000102PMID:1660315837
FYPO:0001241normal growth on anisomycinCell growth assayatf1ΔNullPECO:0000137PMID:95855052
FYPO:0001237normal growth on cadmiumCell growth assayatf1ΔNullPECO:0000137PMID:95855056
FYPO:0001023normal growth on cisplatinCell growth assayatf1ΔNullPECO:0000137PMID:958550536
FYPO:0001236normal growth on cycloheximideCell growth assayatf1ΔNullPECO:0000137PMID:958550512
FYPO:0001240normal growth on diamideCell growth assayatf1ΔNullPECO:0000137PMID:95855055
FYPO:0001164normal growth on glucose carbon sourceCell growth assaygad7::ura4NullPECO:0000126PMID:9135083176
Cell growth assayatf1ΔNullPECO:0000137, PECO:0000005, PECO:0000102PMID:16603158
FYPO:0000962normal growth on hydrogen peroxideCell growth assayatf1ΔNullPECO:0000137, PECO:0000005, PECO:0000102PMID:1660315815
FYPO:0001238normal growth on staurosporineCell growth assayatf1ΔNullPECO:0000137PMID:95855057
FYPO:0001239normal growth on tert-butyl hydroperoxideCell growth assayatf1ΔNullPECO:0000137PMID:95855051
FYPO:0001357normal vegetative cell population growthCell growth assayatf1ΔNullPECO:0000137PMID:9585505641
FYPO:0002047resistance to heat shock during nitrogen starvationCell growth assaygad7::ura4NullPMID:91350832
Cell growth assaygad7::ura4NullPMID:9135083
FYPO:0000097sensitive to caffeine105
expressivity FYPO_EXT:0000001Cell growth assayatf1ΔNullPECO:0000137PMID:19672306
FYPO:0000080sensitive to coldCell growth assaygad7::ura4NullPECO:0000201, PECO:0000103PMID:913508343
Cell growth assayatf1ΔNullPECO:0000102, PECO:0000137PMID:10348908
FYPO:0000081sensitive to high osmolarityCell growth assayatf1ΔNullPECO:0000137, PECO:0000207PMID:882458711
FYPO:0000087sensitive to hydrogen peroxide131
expressivity FYPO_EXT:0000003Cell growth assayatf1ΔNullPECO:0000137PMID:19672306
Cell growth assayatf1ΔNullPECO:0000102, PECO:0000126PMID:24521463
Cell growth assayatf1ΔNullPECO:0000137PMID:23874237
FYPO:0000106sensitive to hygromycin BCell growth assayatf1ΔNullPECO:0000137, PECO:0000102, PECO:0000005PMID:1660315811
FYPO:0000271sensitive to salt stressCell growth assayatf1ΔNullPECO:0000207, PECO:0000137PMID:882458784
Cell growth assaygad7::ura4NullPECO:0000207, PECO:0000102, PECO:0000005, PECO:0000137PMID:9135083
FYPO:0000112sensitive to sorbitolCell growth assayatf1ΔNullPECO:0000137, PECO:0000005, PECO:0000102PMID:166031587
Cell growth assayatf1ΔNullPECO:0000005, PECO:0000137, PECO:0000102PMID:10348908
FYPO:0001234slow vegetative cell population growthCell growth assaygad7::ura4NullPECO:0000201, PECO:0000005, PECO:0000103PMID:913508378
FYPO:0002060viable vegetative cell populationMicroscopyatf1ΔNullPECO:0000005, PECO:0000137PMID:236978063759
Microscopyatf1ΔNullPMID:20473289

Cell Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0003162RNA absent from cell during cellular response to salt stress1
affecting gpd1Transcript expression level evidenceatf1ΔNullPECO:0000207PMID:8824587
affecting pyp2Transcript expression level evidenceatf1ΔNullPECO:0000207PMID:8824587
FYPO:0003161RNA absent from cell during vegetative growth13
affecting gpd1Transcript expression level evidenceatf1ΔNullPMID:10348908
FYPO:0001001abnormal cell cycle arrest in mitotic G2 phase during nitrogen starvation9
penetrance FYPO_EXT:0000001Flow cytometry datagad7::ura4NullPMID:9135083
FYPO:0003812abnormal nucleosome positioning at stress response genesQuantitative PCRatf1ΔNullPMID:251227511
FYPO:0000235abnormal regulation of translation in response to osmotic stressatf1ΔNullPMID:180656502
FYPO:0002003abolished RNA polymerase II core promoter proximal region sequence-specific DNA binding5
affecting SO:0001843 and pcr1Gel electrophoresis evidencegad7::ura4NullPMID:9135083
FYPO:0002623decreased RNA level during cellular response to glucose stimulus4
affecting mae2Transcript expression level evidenceatf1 mutantNot specifiedPMID:11453251
FYPO:0002287decreased RNA level during cellular response to heat4
affecting pmp3Transcript expression level evidenceatf1ΔNullPMID:16603158
FYPO:0001116decreased RNA level during cellular response to hydrogen peroxide13
affecting gpd1Transcript expression level evidenceatf1-bZIP (1-394)Not specifiedPMID:25122751
affecting hsp9Transcript expression level evidenceatf1-bZIP (1-394)Not specifiedPMID:25122751
affecting pmp3Transcript expression level evidenceatf1ΔNullPMID:16603158
affecting ntp1Transcript expression level evidenceatf1ΔNullPMID:12855726
affecting tps1Transcript expression level evidenceatf1ΔNullPMID:12855726
FYPO:0001259decreased RNA level during cellular response to hypoxia5
affecting mae2Transcript expression level evidenceatf1 mutantNot specifiedPMID:11453251
FYPO:0002305decreased RNA level during cellular response to non-ionic osmotic stress3
affecting cta3Transcript expression level evidenceatf1ΔNullPECO:0000025, PECO:0000201PMID:10428498
affecting pmp3Transcript expression level evidenceatf1ΔNullPECO:0000025PMID:16603158
FYPO:0002304decreased RNA level during cellular response to salt stress8
affecting tps1Transcript expression level evidenceatf1ΔNullPECO:0000166PMID:12855726
affecting ntp1Transcript expression level evidenceatf1ΔNullPECO:0000166PMID:12855726
affecting cta3Transcript expression level evidenceatf1ΔNullPECO:0000166, PECO:0000201PMID:10428498
FYPO:0001152decreased RNA level during nitrogen starvation28
affecting ste11Transcript expression level evidencegad7::ura4NullPMID:9135083
FYPO:0000711decreased cell cycle arrest in mitotic G1 phase in response to nitrogen starvationFlow cytometry dataatf1ΔNullPMID:88245876
FYPO:0000303decreased conjugation frequencyCell growth assaygad7::ura4NullPECO:0000015PMID:913508336
FYPO:0000708decreased mating efficiencyMicroscopyatf1ΔNullPMID:8824587240
FYPO:0000476decreased meiosisOtheratf1-/atf1- (homozygous diploid)NullPMID:882458713
FYPO:0002925decreased protein localization to M26 site2
affecting med7Chromatin immunoprecipitation experimentatf1ΔNullPECO:0000236PMID:24224056
FYPO:0000584decreased sporulationCell growth assaygad7-/gad7- diploidNullPECO:0000015PMID:913508361
FYPO:0000781decreased transcription during vegetative growth21
affecting fbp1Quantitative PCRatf1ΔNullPECO:0000236PMID:24224056
affecting agl1Quantitative PCRatf1ΔNullPECO:0000236PMID:24224056
affecting agl1Quantitative PCRatf1ΔNullPECO:0000236PMID:24224056
FYPO:0000998elongated cell during nitrogen starvationMicroscopygad7::ura4NullPMID:913508318
FYPO:0000825increased RNA level during vegetative growth148
affecting bfr1Northern assay evidenceatf1ΔNullPECO:0000078PMID:9585505
FYPO:0003908increased antisense RNA transcription at stress response genesTranscript expression level evidenceatf1ΔNullPMID:251227511
FYPO:0003909increased nucleosome occupancy at CRE siteQuantitative PCRatf1ΔNullPMID:251227511
FYPO:0003035normal RNA level during cellular response to UV9
affecting uvi15Transcript expression level evidenceatf1ΔNullPMID:10954610
FYPO:0001246normal RNA level during cellular response to hydrogen peroxide3
affecting ntp1Transcript expression level evidenceatf1ΔNullPMID:9974219
FYPO:0001096normal RNA level during nitrogen starvation10
affecting fnx1Northern assay evidenceatf1ΔNullPECO:0000103, PECO:0000126PMID:9710608
FYPO:0001483normal alpha,alpha-trehalase activity increase during cellular response to oxidative stressEnzyme assay dataatf1ΔNullPMID:99742191
FYPO:0001682normal alpha,alpha-trehalase activity increase during cellular response to salt stressEnzyme assay dataatf1ΔNullPECO:0000166PMID:128557264
FYPO:0000988normal cellular response to arsenicCell growth assayatf1ΔNullPECO:0000137PMID:95855052
FYPO:0003462normal cellular trehalose level during cellular response to oxidative stressSubstance quantification evidenceatf1ΔNullPMID:128557262
FYPO:0003461normal cellular trehalose level during cellular response to salt stressSubstance quantification evidenceatf1ΔNullPECO:0000166PMID:128557263
FYPO:0003813normal nucleosome positioning at stress response genesQuantitative PCRatf1-bZIP (1-394)Not specifiedPMID:251227511
FYPO:0002177viable vegetative cell with normal cell morphology3089
penetrance FYPO_EXT:0000001Microscopyatf1ΔNullPECO:0000005, PECO:0000137PMID:23697806
Target Of
OntologyRelationshipGeneProductReference
FYPO affected by mutation in cgs1 cAMP-dependent protein kinase regulatory subunit Cgs1 PMID:9135083
FYPO affected by mutation in csx1 RNA-binding protein Csx1 PMID:17612531
FYPO affected by mutation in ctu2 cytosolic thiouridylase subunit Ctu2 PMID:23874237
FYPO affected by mutation in elp3 elongator complex subunit Elp3 (predicted) PMID:23874237
FYPO affected by mutation in lkh1 dual specificity protein kinase Lkh1 PMID:17612531
FYPO affected by mutation in moe1 translation initiation factor eIF3d Moe1 PMID:19672306
FYPO affected by mutation in pcr1 transcription factor Pcr1 PMID:9135083
FYPO affected by mutation in pka1 cAMP-dependent protein kinase catalytic subunit Pka1 PMID:9135083
FYPO affected by mutation in sty1 MAP kinase Sty1 PMID:17612531
FYPO affected by mutation in sty1 MAP kinase Sty1 PMID:8824587
FYPO affected by mutation in wis1 MAP kinase kinase Wis1 PMID:9135083
GO binds csx1 RNA-binding protein Csx1 PMID:17612531
GO localised by pcr1 transcription factor Pcr1 PMID:9135083
GO regulated by csx1 RNA-binding protein Csx1 PMID:17612531
GO regulated by lkh1 dual specificity protein kinase Lkh1 PMID:14623292
GO regulated by pmk1 MAP kinase Pmk1 PMID:22661707
GO substrate of sty1 MAP kinase Sty1 PMID:9251044
GO substrate of sty1 MAP kinase Sty1 PMID:8824587
Transcript
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
115461941546464
215473201549862

UTRs

Region Coordinates Reference
five_prime_UTR1546194..1546464,1547320..1547660PMID:21511999
three_prime_UTR1549362..1549862PMID:21511999
Protein Features

Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID Database InterPro Description Start End Count
PF00170 Pfam IPR004827 Basic-leucine zipper domain 474 530 5
PF11785 Pfam IPR020956 Transcription factor Aft1, osmotic stress domain 57 100 1
PF11787 Pfam IPR021756 Transcription factor Aft1, HRR domain 238 317 1
PF11786 Pfam IPR021755 Transcription factor Aft1, HRA domain 148 234 1
SM00338 SMART IPR004827 Basic-leucine zipper domain 470 534 5
PS50217 Prosite Profiles IPR004827 Basic-leucine zipper domain 472 535 6
PTHR19304:SF5 HMMPANTHER 85 542 2
PTHR19304 HMMPANTHER 85 542 4
1.20.5.170 Gene3D 474 535 7
SSF57959 SuperFamily 474 534 6
Coil ncoils Rabaptin coiled-coil domain 497 532 968

View domain organization at Pfam

Manually Curated Family or Sub-families

Term IDTerm NameReferenceCount
PBO:0000545bZIP (basic leucine zipper) transcription factor familyPMID:8824587Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000545
PBO:0002433Atf-CREB subfamilyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0002433

Protein Properties

Ave. residue weight 105.50 Da
Charge -2.50
Isoelectric point 5.75
Molecular weight 59.71 kDa
Number of residues 566
Modifications

Protein Modifications

Term IDTerm NameEvidenceResidueReferenceCount
MOD:00696phosphorylated residueIDAPMID:91350831922
added during single-celled organism vegetative growth phase
removed during cellular response to nitrogen starvationIDAPMID:9135083
IDAPMID:8824587
Sequence
Gene Expression

Qualitative Gene Expression

DescriptionLevelEvidenceReference
protein levelincreased during GO:0070301Western blot evidencePMID:23874237
present during GO:0072690Western blot evidencePMID:8824587
RNA levelincreased during GO:0070301quantitative PCRPMID:17612531
present during GO:0072690Northern assay evidencePMID:23874237
increased during GO:0070301Northern assay evidencePMID:23874237
increased in presence of methyl methanesulfonate expression microarray evidencePMID:12529438
increased during GO:0071470expression microarray evidencePMID:12529438
present during GO:0072690Northern assay evidencePMID:8824587
increased during GO:0071472Northern assay evidencePMID:8824587
increased during GO:0034599expression microarray evidencePMID:12529438
increased during GO:0034605expression microarray evidencePMID:12529438
increased in presence of cadmium sulfate expression microarray evidencePMID:12529438

Quantitative Gene Expression

Protein Level

Molecules/Cell (average)ExtensionConditionScaleEvidenceReference
3577.25during GO:0072690PECO:0000005,
PECO:0000014
population_wideexperimental evidencePMID:23101633
6987.67during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127
population_wideexperimental evidencePMID:23101633

RNA Level

Molecules/Cell (average)ExtensionConditionScaleEvidenceReference
5during GO:0072690PECO:0000005,
PECO:0000014
population_wideexperimental evidencePMID:23101633
3during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127
population_wideexperimental evidencePMID:23101633
Subunit Composition
DescriptionQualifierReferenceCount
homomeric(2) PMID:795884946
heteromeric(2) PMID:795884942
Misc
DescriptionQualifierReferenceCount
deletion mutant expression profiling PMID:12529438 PMID:1800397678
Pathway
DescriptionQualifierReferenceCount
links stress-activated MAPK (Sty1) pathway to cAMP-dependent protein kinase (Pka1) pathway PMID:154481373
Species Distribution
DescriptionQualifierReferenceCount
orthologs cannot be distinguished130
conserved in fungi4600
conserved in eukaryotes4514
conserved in eukaryotes only2497
Orthologs

Orthologs in Compara


Genetic Interactions

Source: BioGRID

Gene Product Evidence Reference
wis1MAP kinase kinase Wis1 Synthetic RescuePMID:8824587
Phenotypic SuppressionPMID:15870269
atf21transcription factor, Atf-CREB family Atf21 Dosage RescuePMID:10102365
tup11transcriptional corepressor Tup11 Phenotypic SuppressionPMID:11238405
ago1argonaute Phenotypic EnhancementPMID:15218150
pcr1transcription factor Pcr1 Phenotypic EnhancementPMID:18375616
Dosage RescuePMID:10102365
cdc25M phase inducer tyrosine phosphatase Cdc25 Phenotypic EnhancementPMID:24728197
Synthetic Growth Defect
Phenotypic Suppression
cut1separase/separin Synthetic LethalityPMID:16861909
cip1RNA-binding protein Cip1 Synthetic RescuePMID:16407405
ubp6ubiquitin C-terminal hydrolase Ubp6 Synthetic LethalityPMID:15533439
prr1transcription factor Prr1 Synthetic Growth DefectPMID:11179424
sty1MAP kinase Sty1 Phenotypic SuppressionPMID:9154834
Dosage RescuePMID:8824587
Synthetic Growth DefectPMID:20061379
Dosage Rescue
Phenotypic Enhancement
pmk1MAP kinase Pmk1 Positive GeneticPMID:22661707
tup12transcriptional corepressor Tup12 Phenotypic SuppressionPMID:11238405
wee1M phase inhibitor protein kinase Wee1 Phenotypic SuppressionPMID:9135083
Dosage Growth DefectPMID:24728197
pap1transcription factor Pap1/Caf3 Synthetic RescuePMID:16087744
Synthetic LethalityPMID:15247218
Phenotypic EnhancementPMID:12855726
Phenotypic EnhancementPMID:11907263
Phenotypic EnhancementPMID:10749922
Negative GeneticPMID:9585505
Dosage RescuePMID:24521463
sck2serine/threonine protein kinase Sck2 Synthetic LethalityPMID:20453258
cip2RNA-binding protein Cip2 Synthetic RescuePMID:16407405
uch2ubiquitin C-terminal hydrolase Uch2 Synthetic Growth DefectPMID:15533439
rpn1019S proteasome regulatory subunit Rpn10 Synthetic LethalityPMID:10809753
deb1transcription factor Deb1/Rdp1 Phenotypic EnhancementPMID:15218150
int6eIF3e subunit Int6 Dosage RescuePMID:20875427
zip1transcription factor Zip1 Dosage RescuePMID:10102365
ecl1extender of the chronological lifespan protein Ecl1 Phenotypic SuppressionPMID:24696293
atf31transcription factor Atf31 Dosage RescuePMID:10102365
dcr1dicer Phenotypic EnhancementPMID:15218150
ran1serine/threonine protein kinase Ran1 Synthetic RescuePMID:8824587
cdc13G2/M B-type cyclin Cdc13 Synthetic RescuePMID:24728197
Physical Interactions

Source: BioGRID

Gene Product Evidence Reference
rhp23Rad23 homolog Rhp23 Affinity Capture-WesternPMID:11584278
rpn1019S proteasome regulatory subunit Rpn10 Affinity Capture-WesternPMID:11584278
swi6HP1 family chromodomain protein Swi6 Affinity Capture-WesternPMID:15292231
cbf11CBF1/Su(H)/LAG-1 family transcription factor Cbf11 Affinity Capture-MSPMID:22540037
sty1MAP kinase Sty1 Biochemical ActivityPMID:8824587
Affinity Capture-Western
Two-hybridPMID:23695164
Biochemical ActivityPMID:8824588
Biochemical ActivityPMID:23640764
Biochemical ActivityPMID:12383265
Biochemical ActivityPMID:18272791
pcr1transcription factor Pcr1 Affinity Capture-WesternPMID:18375616
Affinity Capture-RNAPMID:22144913
Affinity Capture-WesternPMID:9135083
pmk1MAP kinase Pmk1 Biochemical ActivityPMID:17881729
dph1UBA domain protein Dph1 Affinity Capture-WesternPMID:11584278
fbh1DNA helicase I Affinity Capture-WesternPMID:19836238
clr3histone deacetylase (class II) Clr3 Affinity Capture-WesternPMID:15292231
clr6histone deacetylase (class I) Clr6 Affinity Capture-WesternPMID:15292231
pka1cAMP-dependent protein kinase catalytic subunit Pka1 Biochemical ActivityPMID:23640764
Affinity Capture-Western
External References
Database Identifier Description
NBRP SPBC29B5.01 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC29B5.01 Retrieval of eukaryotic orthologs (Bähler Lab)
BioGrid SPBC29B5.01 BioGRID Interaction Datasets
Expression Viewer SPBC29B5.01 Cell Cycle Expression Profile (Bähler Lab)
Expression Viewer SPBC29B5.01 Meiosis/Sporulation Expression Profies (Bähler Lab)
Expression Viewer SPBC29B5.01 Pheromone response/mating expression profiles (Bähler Lab)
Expression Viewer SPBC29B5.01 Environmental stress expression profiles (Bähler Lab)
Pomb(A) SPBC29B5.01 Polyadenylation Viewer (Gullerova lab)
pombeTV SPBC29B5.01 Transcriptome Viewer (Bähler Lab)
Cyclebase SPBC29B5.01 Cell Cycle Data
GEO SPBC29B5.01 GEO profiles
PInt SPBC29B5.01 Protein-Protein Interaction Predictor (Bähler Lab)
PeptideAtlas SPBC29B5.01 Peptides identified in tandem mass spectrometry proteomics experiments
SYSGRO SPBC29B5.01 Fission yeast phenotypic data & analysis
SPD / RIKEN33/33C12Orfeome Localization Data
UniProtKB/SwissProtP52890Transcription factor atf1
ModBaseP52890Database of comparative protein structure models
STRINGP52890Network display of known and predicted interactions and functional associations
RefSeq PeptideNP_595652transcription factor, Atf-CREB family Atf1
RefSeq mRNANM_001021546972h- transcription factor, Atf-CREB family Atf1 (atf1), mRNA
European Nucleotide ArchiveAAA93260.1ENA Protein Mapping
European Nucleotide ArchiveAAB46990.1ENA Protein Mapping
European Nucleotide ArchiveBAA09817.1ENA Protein Mapping
European Nucleotide ArchiveBAA09841.1ENA Protein Mapping
European Nucleotide ArchiveBAA12194.1ENA Protein Mapping
European Nucleotide ArchiveCAC05510.1ENA Protein Mapping
UniParcUPI0000126228UniProt Archive

Literature for atf1

Search: Europe PMC or PubMed

Release Version: PomBase:23_47 - 27 Oct 2014