SPBC32H8.09

Synonyms SPACTOKYO_453.21c, pi015 ChromosomeII
ProductWD repeat protein, human WDR8 family Gene Start1468486
Feature Typeprotein coding Gene End1470473
Name Description CDS Start1468525
Characterisation Statusconserved_unknown CDS End1470087

Ensembl Gene Location
SPNCRNA.1435 mug93 git5 omh5 SPNCRNA.1436 snR95 > SPBC32H8.09 < cdk9 mei4 act1
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
114684861468887
214689601469035
314690751470473

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF08662 Pfam Translation initiation factor 2A, beta propellor-like domain 80 236 20.5 4
50960 Superfamily 13 373 72 2
SM00320 Smart WD40 repeat 89 128 26.4 121
PS50082 PROSITE WD40 repeat 96 137 10.408 100
PS50294 PROSITE WD40-repeat-containing domain 96 137 10.074 104

Protein Properties

Ave. residue weight 115.84 Da
Charge 2.50
Isoelectric point 6.70
Molecular weight 55.95 kDa
Number of residues 483
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634
GO:0005816spindle pole bodyIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005816
GO:0005829cytosolIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005829

Protein Family

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DescriptionSourceAll Genes
WD repeat proteinTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000190

Species Distribution

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DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
no apparent S. cerevisiae orthologTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000055
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094


External References

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Database Identifier Description
NBRP SPBC32H8.09 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC32H8.09 Retrieval of eukaryotic orthologs
BioGrid SPBC32H8.09 BioGRID Interaction Datasets
Bähler Lab SPBC32H8.09 Cell Cycle Expression Profile
Bähler Lab SPBC32H8.09 Meiosis/Sporulation Expression Profies
Bähler Lab SPBC32H8.09 Pheromone response/mating expression profiles
Bähler Lab SPBC32H8.09 Environmental stress expression profiles
Bähler Lab SPBC32H8.09 Bähler Lab Transcriptome Viewer
Cyclebase SPBC32H8.09 Cell Cycle Data
Entrez Gene SPBC32H8.09 Link to Entrez Gene
SPD / RIKEN50/50H03Orfeome Localization Data
UniProtKB/SwissProtQ96WW0Uncharacterized WD repeat-containing protein C32H8.09
ArrayExpressQ96WW0Link to ArrayExpress
RefSeq PeptideNP_595615WD repeat-containing protein
RefSeq mRNANM_001021510972h- WD repeat-containing protein (SPBC32H8.09), mRNA
European Nucleotide ArchiveAB004534ENA EMBL mapping
European Nucleotide ArchiveAB004535ENA EMBL mapping
European Nucleotide ArchiveCU329671ENA EMBL mapping
European Nucleotide ArchiveBAA21392ENA Protein Mapping
European Nucleotide ArchiveBAA21394ENA Protein Mapping
European Nucleotide ArchiveCAC37499ENA Protein Mapping
UniParcUPI000006C220UniProt Archive

Literature for SPBC32H8.09

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Search: UK PMC or PubMed