crb2 (SPBC342.05)


Gene Standard Namecrb2 Characterisation Statuspublished
Systematic IDSPBC342.05 Feature Typeprotein coding
Synonymsrhp9 Name Description
ProductDNA repair protein Rad9 homolog Crb2 Product Size778aa, 87.46 kDa
Genomic Location Chromosome II, 4210933-4213577 (2645nt); CDS:4211087-4213423 (2337nt)

Ensembl Gene Location
GO Molecular Function
Term NameCount
protein binding854
Annotation ExtensionEvidenceWith/FromReference
GO Biological Process
Term NameCount
mitotic G2 DNA damage checkpoint7
Annotation ExtensionEvidenceWith/FromReference
GO Cellular Component
Term NameCount
nuclear chromatin307
Annotation ExtensionEvidenceWith/FromReference
nucleus2696
Annotation ExtensionEvidenceWith/FromReference
site of double-strand break46
Annotation ExtensionEvidenceWith/FromReference
Fission Yeast Phenotype Ontology
Gene Deletion Viability: Viable

Population Phenotype

Term NameAlleleExpressionCount
normal growth during cellular response to gamma radiationV188P (V188P)Not specified16
normal growth during cellular response to UVcrb2-8AQ (S18A, S89A, S145A, S170A, S305A, S353A, S512A, S772A)Endogenous46
V188P (V188P)Not specified
normal growth on camptothecincrb2-8AQ (S18A, S89A, S145A, S170A, S305A, S353A, S512A, S772A)Endogenous22
normal growth on hydroxyureacrb2-8AQ (S18A, S89A, S145A, S170A, S305A, S353A, S512A, S772A)Endogenous36
normal vegetative cell population growthcrb2ΔNull717
T187A (T187A)Not specified
T215A (T215A)Not specified
T235A (T235A)Not specified
sensitive to 4-nitroquinoline N-oxidecrb2ΔNull159
sensitive to bleomycincrb2ΔNull51
sensitive to camptothecincrb2-2AQ (T73A, S80A)Endogenous224
crb2ΔNull
F400A (F400A)Not specified
sensitive to hydroxyureacrb2-2AQ (T73A, S80A)Endogenous525
crb2ΔNull
sensitive to ionizing radiationcrb2-2AQ (T73A, S80A)Endogenous58
crb2ΔNull
T187A (T187A)Not specified
T215A (T215A)Not specified
T215A,T235A (T215A, T235A)Not specified
T235A (T235A)Not specified
V188P,T215A,T235A (V188P, T215A, T235A)Not specified
sensitive to methyl methanesulfonatecrb2ΔNull228
sensitive to UVcrb2-2AQ (T73A, S80A)Endogenous138
sensitive to UV during vegetative growthcrb2ΔNull136
T187A (T187A)Not specified
T215A (T215A)Not specified
T215A,T235A (T215A, T235A)Not specified
T235A (T235A)Not specified
V184K (V184K)Not specified
V188P,T215A,T235A (V188P, T215A, T235A)Not specified
viable vegetative cell populationcrb2ΔNull3792
unnamed (unrecorded)

Cell Phenotype

Term NameAlleleExpressionCount
abnormal mitotic cell cycle regulation during cellular response to ionizing radiationcrb2-2AQ (T73A, S80A)Endogenous8
crb2ΔNull
abolished protein binding88
affecting rad4 and crb2V184G (V184G)Not specified
affecting rad4 and crb2V184K (V184K)Not specified
abolished protein localization to double-strand break site4
affecting chk1crb2(276-778) (1-275)Endogenous
affecting chk1crb2-2AQ (T73A, S80A)Endogenous
affecting chk1crb2ΔNull
advanced mitotic G1 phase entry during cellular response to ionizing radiationcrb2-2AQ (T73A, S80A)Endogenous2
T187A (T187A)Not specified
T215A (T215A)Not specified
T235A (T235A)Not specified
complete but unequal mitotic sister chromatid segregationcrb2-2AQ (T73A, S80A)Endogenous27
crb2ΔNull
cut during cellular response to ionizing radiationcrb2-2AQ (T73A, S80A)Endogenous1
crb2ΔNull
decreased protein localization to double-strand break site4
affecting chk1crb2-S80A (S80A)Endogenous
affecting chk1crb2-T73A (T73A)Endogenous
decreased protein phosphorylation during cellular response to camptothecin4
affecting rad9crb2ΔNull
decreased protein phosphorylation during cellular response to DNA damage3
affecting chk1crb2-2AQ (T73A, S80A)Endogenous
decreased protein threonine phosphorylation during mitotic M phase2
affecting PR:000037316T215A (T215A)Not specified
affecting PR:000037316T235A (T235A)Not specified
elongated cell during cellular response to ionizing radiationcrb2-S80A (S80A)Endogenous1
crb2-T73A (T73A)Endogenous
increased double-strand break repair via nonhomologous end joiningcrb2ΔNull3
loss of punctate nuclear protein localization during cellular response to ionizing radiation4
affecting chk1crb2-2AQ (T73A, S80A)Endogenous
affecting crb2T187A (T187A)Not specified
affecting crb2T215A (T215A)Not specified
affecting crb2T235A (T235A)Not specified
affecting crb2V184K (V184K)Not specified
normal DNA contentcrb2ΔNull21
normal protein binding53
affecting rad4 and crb2V188P (V188P)Not specified
normal protein localization to site of double-strand break2
affecting chk1crb2(1358)-LZ (del aa 359-778 with C-terminal heterologous leucine zipper)Endogenous
affecting crb2crb2-2AQ (T73A, S80A)Endogenous
affecting crb2crb2-S80A (S80A)Endogenous
affecting crb2crb2-T73A (T73A)Endogenous
normal punctate nuclear localization during cellular response to ionizing radiation2
affecting crb21-358 (359-778)Not specified
affecting crb2crb2-2AQ (T73A, S80A)Endogenous
affecting crb2S234A (S234A)Not specified
shortened telomerescrb2ΔNull35
viable vegetative cell with normal cell morphologycrb2ΔNull3092
Target Of
OntologyRelationshipGeneProductReference
FYPO affected by mutation in crb2 DNA repair protein Rad9 homolog Crb2 PMID:24074952
FYPO affected by mutation in pdp1 PWWP domain protein Pdp1 PMID:19250904
FYPO affected by mutation in rad4 BRCT domain protein Rad4 PMID:24074952
FYPO affected by mutation in set9 histone lysine H3-K20 methyltransferase Set9 PMID:19250904
GO localized by set9 histone lysine H3-K20 methyltransferase Set9 PMID:15550243
GO substrate of cdc2 cyclin-dependent protein kinase Cdk1/Cdc2 PMID:24074952
Transcript
Ensembl transcript structure with UTRs, exons and introns

Transcript Structure

Region Coordinates Reference
Exons4210933..4213577
mRNA4210933..4213577
5' UTR4210933..4211086PMID:21511999
CDS4211087..4213423
3' UTR4213424..4213577PMID:21511999
Protein Features

Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID Database InterPro Description Start End Count
PF00533 Pfam IPR001357 BRCT domain 536 640 8
SM00292 SMART IPR001357 BRCT domain 537 643 10
PS50172 Prosite Profiles IPR001357 BRCT domain 535 653 13
PS50172 Prosite Profiles IPR001357 BRCT domain 759 778 13
PTHR15321 HMMPANTHER 496 777 1
3.40.50.10190 Gene3D IPR001357 BRCT domain 536 654 13
SSF52113 SuperFamily IPR001357 BRCT domain 534 669 12

View domain organization at Pfam

Manually Curated Family or Sub-families

Term IDTerm NameReferenceCount
PBO:0000443BRCT domainTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000443
PBO:0001140tudor domainTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0001140

Protein Properties

Ave. residue weight 112.42 Da
Charge 11.50
Isoelectric point 8.26
Molecular weight 87.46 kDa
Number of residues 778
Modifications

Protein Modifications

Term NameResidueCount
O-phospho-L-serine 1672
present during mitotic M phaseS88
present during mitotic M phaseS93
present during mitotic M phaseS89
present during mitotic M phaseS47
S80, S89, S93
present during mitotic M phaseS43
Annotation ExtensionEvidenceResidueReference
present during mitotic M phase experimental evidence S43 PMID:21712547
present during mitotic M phase experimental evidence S47 PMID:21712547
IDA S80 PMID:22792081
present during mitotic M phase experimental evidence S88 PMID:21712547
experimental evidence S89 PMID:24763107
present during mitotic M phase experimental evidence S89 PMID:21712547
experimental evidence S93 PMID:24763107
present during mitotic M phase experimental evidence S93 PMID:21712547
O-phospho-L-threonineT73, T187, T215, T235 698
Annotation ExtensionEvidenceResidueReference
IDA T73 PMID:22792081
IDA T187 PMID:24074952
IDA T215 PMID:24074952
IDA T235 PMID:24074952
Sequence
Gene Expression

Quantitative Gene Expression

RNA Level

Molecules/Cell (average)ExtensionConditionScaleEvidenceReference
1.6during GO:0072690PECO:0000005,
PECO:0000014
population wideexperimental evidencePMID:23101633
0.65during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127
population wideexperimental evidencePMID:23101633
Disease Association
DescriptionQualifierReferenceCount
cancer142
Species Distribution
DescriptionQualifierReferenceCount
predominantly single copy (one to one)3092
conserved in fungi4604
conserved in eukaryotes4516
conserved in metazoa3430
conserved in vertebrates3405
conserved in eukaryotes only2502
Orthologs

Manually curated orthologous groups

SpeciesGeneDescriptionLinksCount

Orthologs in Compara


Physical Interactions

Source: BioGRID

View all interactions in esyN
View the HCPIN interactions in esyN

Gene Product Evidence Reference
binds activation domain construct withcdc13G2/M B-type cyclin Cdc13 Two-hybridPMID:23695164
modified bycdc2cyclin-dependent protein kinase Cdk1/Cdc2 Biochemical ActivityPMID:24074952
modified bycdc2cyclin-dependent protein kinase Cdk1/Cdc2 Biochemical ActivityPMID:10488332
affinity captureschk1Chk1 protein kinase Affinity Capture-WesternPMID:23422000
binds DNA-binding domain construct withchk1Chk1 protein kinase Two-hybridPMID:9407031
binds DNA-binding domain construct withchk1Chk1 protein kinase Two-hybridPMID:15229228
affinity captured bychk1Chk1 protein kinase Affinity Capture-WesternPMID:14739927
binds to peptidechk1Chk1 protein kinase Protein-peptidePMID:22792081
forms complex withchk1Chk1 protein kinase Reconstituted ComplexPMID:22792081
affinity captureschk1Chk1 protein kinase Affinity Capture-WesternPMID:22792081
forms complex withcrb2DNA repair protein Rad9 homolog Crb2 Reconstituted ComplexPMID:18676809
binds activation domain construct withcrb2DNA repair protein Rad9 homolog Crb2 Two-hybridPMID:15229228
affinity capturescrb2DNA repair protein Rad9 homolog Crb2 Affinity Capture-WesternPMID:15229228
forms complex withhhf1histone H4 h4.1 Reconstituted ComplexPMID:18826944
affinity captured byhta1histone H2A alpha Affinity Capture-WesternPMID:20679488
affinity captured byhta2histone H2A beta Affinity Capture-WesternPMID:20679488
binds activation domain construct withptc1protein phosphatase 2C Ptc1 Two-hybridPMID:23695164
affinity captured byrad3ATR checkpoint kinase Rad3 Affinity Capture-WesternPMID:14739927
rad4BRCT domain protein Rad4 Co-crystal or NMR structurePMID:24074952
affinity capturesrad4BRCT domain protein Rad4 Affinity Capture-WesternPMID:24074952
binds DNA-binding domain construct withrad4BRCT domain protein Rad4 Two-hybridPMID:9407031
forms complex withrad4BRCT domain protein Rad4 Reconstituted ComplexPMID:9407031
binds DNA-binding domain construct withrad4BRCT domain protein Rad4 Two-hybridPMID:16778077
binds DNA-binding domain construct withrad4BRCT domain protein Rad4 Two-hybridPMID:15229228
affinity capturesrad4BRCT domain protein Rad4 Affinity Capture-WesternPMID:24663817
forms complex withrad4BRCT domain protein Rad4 Reconstituted ComplexPMID:24663817
affinity capturesrad9checkpoint clamp complex protein Rad9 Affinity Capture-WesternPMID:24663817
binds DNA-binding domain construct withsad1spindle pole body protein Sad1 Two-hybridPMID:14655046
modified byset9histone lysine H3-K20 methyltransferase Set9 Biochemical ActivityPMID:15550243
Genetic Interactions

Source: BioGRID

View these interactions in esyN

Gene Product Evidence Reference
negative genetic interaction withams2cell cycle regulated GATA-type transcription factor Ams2 Negative GeneticPMID:22681890
negative genetic interaction withapc10anaphase-promoting complex substrate recognition subunit Apc10 Negative GeneticPMID:22681890
positive genetic interaction withask1DASH complex subunit Ask1 Positive GeneticPMID:22681890
positive genetic interaction withayr11-acyldihydroxyacetone phosphate reductase (predicted) Positive GeneticPMID:22681890
synthetically rescued bybdf1Swr1 complex bromodomain subunit Brf1 Synthetic RescuePMID:22095079
synthetically rescued bybdf2BET family double bromodomain protein Bdf2 Synthetic RescuePMID:22095079
negative genetic interaction withbrc1BRCT domain protein Brc1 Negative GeneticPMID:20094029
phenotype enhanced bycdc10MBF transcription factor complex subunit Cdc10 Phenotypic EnhancementPMID:9928931
phenotype enhanced bycdc17ATP-dependent DNA replication ligase Cdc17 Phenotypic EnhancementPMID:9928931
phenotype enhanced bycdc18MCM loader Phenotypic EnhancementPMID:9928931
synthetic growth defect withcdc2cyclin-dependent protein kinase Cdk1/Cdc2 Synthetic Growth DefectPMID:24861625
phenotype enhanced bycdc20DNA polymerase epsilon catalytic subunit Pol2 Phenotypic EnhancementPMID:9928931
enhances phenotype ofcdc20DNA polymerase epsilon catalytic subunit Pol2 Phenotypic EnhancementPMID:14739927
enhances phenotype ofcdc20DNA polymerase epsilon catalytic subunit Pol2 Phenotypic EnhancementPMID:18667534
rescuescdc20DNA polymerase epsilon catalytic subunit Pol2 Phenotypic SuppressionPMID:9407031
phenotype enhanced bycdc24DNA replication protein Cdc24 Phenotypic EnhancementPMID:9928931
phenotype enhanced bycdc27DNA polymerase delta subunit Cdc27 Phenotypic EnhancementPMID:9928931
synthetic lethal withcdc27DNA polymerase delta subunit Cdc27 Synthetic LethalityPMID:9928931
synthetic lethal withcdc6DNA polymerase delta catalytic subunit Cdc6 Synthetic LethalityPMID:12589755
enhances phenotype ofcdc6DNA polymerase delta catalytic subunit Cdc6 Phenotypic EnhancementPMID:14739927
rescuescdc6DNA polymerase delta catalytic subunit Cdc6 Phenotypic SuppressionPMID:9407031
negative genetic interaction withcdt2WD repeat protein Cdt2 Negative GeneticPMID:22681890
rescueschk1Chk1 protein kinase Phenotypic SuppressionPMID:12081644
synthetically rescueschk1Chk1 protein kinase Synthetic RescuePMID:16816416
synthetically rescued bychk1Chk1 protein kinase Synthetic RescuePMID:15229228
rescued by overexpression ofchk1Chk1 protein kinase Dosage RescuePMID:9407031
negative genetic interaction withcsn2COP9/signalosome complex subunit Csn2 Negative GeneticPMID:22681890
synthetic growth defect withctp1CtIP-related endonuclease Synthetic Growth DefectPMID:21098122
enhances phenotype ofctp1CtIP-related endonuclease Phenotypic EnhancementPMID:21098122
synthetic growth defect withcut1separase/separin Synthetic Growth DefectPMID:9153313
synthetic growth defect withcut14condensin complex subunit Cut14 Synthetic Growth DefectPMID:22645654
synthetic growth defect withcut2securin, sister chromatid separation inhibitor Synthetic Growth DefectPMID:15329725
negative genetic interaction withdcd1deoxycytidylate deaminase (predicted) Negative GeneticPMID:22681890
synthetic growth defect withddb1damaged DNA binding protein Ddb1 Synthetic Growth DefectPMID:18931302
negative genetic interaction withddb1damaged DNA binding protein Ddb1 Negative GeneticPMID:18818364
negative genetic interaction withddb1damaged DNA binding protein Ddb1 Negative GeneticPMID:22681890
negative genetic interaction withemc1ER membrane protein complex subunit Emc1 (predicted) Negative GeneticPMID:22681890
positive genetic interaction witherd1Erd1 homolog (predicted) Positive GeneticPMID:22681890
synthetic growth defect withexo1exonuclease I Exo1 Synthetic Growth DefectPMID:18931302
negative genetic interaction withexo1exonuclease I Exo1 Negative GeneticPMID:18818364
negative genetic interaction withexo1exonuclease I Exo1 Negative GeneticPMID:22681890
negative genetic interaction withfml1ATP-dependent 3' to 5' DNA helicase, FANCM ortholog Fml1 Negative GeneticPMID:18818364
negative genetic interaction withfml1ATP-dependent 3' to 5' DNA helicase, FANCM ortholog Fml1 Negative GeneticPMID:22681890
negative genetic interaction withfml2ATP-dependent 3' to 5' DNA helicase (predicted) Negative GeneticPMID:22681890
negative genetic interaction withgrx3monothiol glutaredoxin Grx3 Negative GeneticPMID:22681890
rescueshhp1serine/threonine protein kinase Hhp1 Phenotypic SuppressionPMID:24861625
positive genetic interaction withhip4histone promoter control protein Hip4 Positive GeneticPMID:22681890
negative genetic interaction withhrq1RecQ type DNA helicase Hrq1 (predicted) Negative GeneticPMID:18818364
negative genetic interaction withhrq1RecQ type DNA helicase Hrq1 (predicted) Negative GeneticPMID:22681890
negative genetic interaction withhrr1Helicase Required for RNAi-mediated heterochromatin assembly Hrr1 Negative GeneticPMID:22681890
synthetic growth defect withhsk1Dbf4(Dfp1)-dependent protein kinase Hsk1 Synthetic Growth DefectPMID:20176980
synthetic lethal withhst4Sirtuin family histone deacetylase Hst4 Synthetic LethalityPMID:18344406
synthetic growth defect withhta1histone H2A alpha Synthetic Growth DefectPMID:20679485
rescued byhta1histone H2A alpha Phenotypic SuppressionPMID:16314498
phenotype enhanced byhta1histone H2A alpha Phenotypic EnhancementPMID:16314498
synthetic growth defect withhta1histone H2A alpha Synthetic Growth DefectPMID:24806815
synthetically rescued byhta1histone H2A alpha Synthetic RescuePMID:24806815
synthetic growth defect withhta1histone H2A alpha Synthetic Growth DefectPMID:16778077
synthetically rescued byhta1histone H2A alpha Synthetic RescuePMID:16778077
synthetic growth defect withhta2histone H2A beta Synthetic Growth DefectPMID:20679485
phenotype enhanced byhta2histone H2A beta Phenotypic EnhancementPMID:16314498
rescued byhta2histone H2A beta Phenotypic SuppressionPMID:16314498
synthetically rescued byhta2histone H2A beta Synthetic RescuePMID:24806815
synthetic growth defect withhta2histone H2A beta Synthetic Growth DefectPMID:24806815
synthetically rescued byhta2histone H2A beta Synthetic RescuePMID:16778077
synthetic growth defect withhta2histone H2A beta Synthetic Growth DefectPMID:16778077
overexpression rescueshus1checkpoint clamp complex protein Hus1 Dosage RescuePMID:12839619
negative genetic interaction withlsg1Lsk1 complex gamma subunit Lsg1 Negative GeneticPMID:22681890
negative genetic interaction withmcl1DNA polymerase alpha accessory factor Mcl1 Negative GeneticPMID:18818364
synthetically rescued bymdb1BRCT domain protein Mdb1 Synthetic RescuePMID:24806815
synthetic growth defect withmdb1BRCT domain protein Mdb1 Synthetic Growth DefectPMID:24806815
synthetic growth defect withmrc1mediator of replication checkpoint 1 Synthetic Growth DefectPMID:18931302
negative genetic interaction withmrc1mediator of replication checkpoint 1 Negative GeneticPMID:18818364
negative genetic interaction withmre11Mre11 nuclease Negative GeneticPMID:18818364
synthetic growth defect withmus81Holliday junction resolvase subunit Mus81 Synthetic Growth DefectPMID:12589755
positive genetic interaction withnas226S proteasome regulatory particle assembly protein Nas2 (predicted) Positive GeneticPMID:22681890
negative genetic interaction withngg1SAGA complex subunit Ngg1 Negative GeneticPMID:22681890
enhances phenotype oforc1origin recognition complex subunit Orc1 Phenotypic EnhancementPMID:18667534
phenotype enhanced bypcn1PCNA Phenotypic EnhancementPMID:9928931
positive genetic interaction withpet801mitochondrial S-adenosylmethionine transmembrane transporter (predicted) Positive GeneticPMID:22681890
rescued bypku70Ku domain protein Pku70 Phenotypic SuppressionPMID:12196391
negative genetic interaction withpob3FACT complex subunit Pob3 Negative GeneticPMID:22681890
synthetic lethal withpof3F-box protein Pof3 Synthetic LethalityPMID:11809834
synthetic growth defect withpof3F-box protein Pof3 Synthetic Growth DefectPMID:18931302
synthetic lethal withpol1DNA polymerase alpha catalytic subunit Synthetic LethalityPMID:9928931
phenotype enhanced bypol1DNA polymerase alpha catalytic subunit Phenotypic EnhancementPMID:9928931
enhances phenotype ofpol1DNA polymerase alpha catalytic subunit Phenotypic EnhancementPMID:14739927
rescuespol1DNA polymerase alpha catalytic subunit Phenotypic SuppressionPMID:9407031
positive genetic interaction withppk31serine/threonine protein kinase Ppk31 (predicted) Positive GeneticPMID:18818364
positive genetic interaction withprz1calcineurin responsive transcription factor Prz1 Positive GeneticPMID:22681890
negative genetic interaction withptp4phosphatidate cytidylyltransferase Ptp4 (predicted) Negative GeneticPMID:22681890
overexpression rescuesrad1checkpoint clamp complex protein Rad1 Dosage RescuePMID:12839619
synthetic growth defect withrad13DNA repair nuclease Rad13 Synthetic Growth DefectPMID:9153313
overexpression rescuesrad17RFC related checkpoint protein Rad17 Dosage RescuePMID:12839619
synthetic growth defect withrad2FEN-1 endonuclease Rad2 Synthetic Growth DefectPMID:18931302
synthetic growth defect withrad2FEN-1 endonuclease Rad2 Synthetic Growth DefectPMID:9153313
synthetic growth defect withrad26ATRIP, ATR checkpoint kinase regulatory subunit Rad26 Synthetic Growth DefectPMID:12839619
enhances phenotype ofrad3ATR checkpoint kinase Rad3 Phenotypic EnhancementPMID:21098122
synthetic growth defect withrad3ATR checkpoint kinase Rad3 Synthetic Growth DefectPMID:21098122
synthetic growth defect withrad4BRCT domain protein Rad4 Synthetic Growth DefectPMID:16778077
enhances phenotype ofrad4BRCT domain protein Rad4 Phenotypic EnhancementPMID:24074952
phenotype enhanced byrad4BRCT domain protein Rad4 Phenotypic EnhancementPMID:24074952
overexpression rescuesrad4BRCT domain protein Rad4 Dosage RescuePMID:9407031
synthetic growth defect withrad51RecA family recombinase Rad51/Rhp51 Synthetic Growth DefectPMID:12839619
rescued by overexpression ofrad51RecA family recombinase Rad51/Rhp51 Dosage RescuePMID:12839619
negative genetic interaction withrad51RecA family recombinase Rad51/Rhp51 Negative GeneticPMID:18818364
negative genetic interaction withrad51RecA family recombinase Rad51/Rhp51 Negative GeneticPMID:22681890
synthetic lethal withrad52DNA recombination protein, Rad51 mediator Rad52 (previously Rad22) Synthetic LethalityPMID:10373582
negative genetic interaction withrad55RecA family ATPase Rad55/Rhp55 Negative GeneticPMID:22681890
synthetic growth defect withrad57RecA family ATPase Rad57/Rhp57 Synthetic Growth DefectPMID:18931302
negative genetic interaction withrad57RecA family ATPase Rad57/Rhp57 Negative GeneticPMID:18818364
negative genetic interaction withrad57RecA family ATPase Rad57/Rhp57 Negative GeneticPMID:22681890
overexpression rescuesrad9checkpoint clamp complex protein Rad9 Dosage RescuePMID:12839619
negative genetic interaction withrem1meiosis-specific cyclin Rem1 Negative GeneticPMID:22681890
synthetic growth defect withrhp14XP-A family homolog Rhp14 Synthetic Growth DefectPMID:18931302
negative genetic interaction withrhp14XP-A family homolog Rhp14 Negative GeneticPMID:18818364
negative genetic interaction withrhp14XP-A family homolog Rhp14 Negative GeneticPMID:22681890
negative genetic interaction withrhp23Rad23 homolog Rhp23 Negative GeneticPMID:22681890
synthetic growth defect withrhp41DNA repair protein Rhp41 Synthetic Growth DefectPMID:18931302
negative genetic interaction withrhp7Rad7 homolog Rhp7 Negative GeneticPMID:18818364
negative genetic interaction withrps40140S ribosomal protein S4 (predicted) Negative GeneticPMID:22681890
synthetic growth defect withrqh1RecQ type DNA helicase Rqh1 Synthetic Growth DefectPMID:12589755
synthetically rescued byrqh1RecQ type DNA helicase Rqh1 Synthetic RescuePMID:12023299
synthetic growth defect withrqh1RecQ type DNA helicase Rqh1 Synthetic Growth DefectPMID:10373582
negative genetic interaction withrsc1RSC complex subunit Rsc1 Negative GeneticPMID:18818364
negative genetic interaction withrxt2histone deacetylase complex subunit Rxt2 Negative GeneticPMID:22681890
positive genetic interaction withsdu1PPPDE peptidase family (predicted) Positive GeneticPMID:22681890
synthetically rescued byset1histone lysine methyltransferase Set1 Synthetic RescuePMID:12589755
synthetic growth defect withset9histone lysine H3-K20 methyltransferase Set9 Synthetic Growth DefectPMID:16778077
synthetic growth defect withset9histone lysine H3-K20 methyltransferase Set9 Synthetic Growth DefectPMID:15550243
positive genetic interaction withslx1structure-specific endonuclease catalytic subunit Slx1 Positive GeneticPMID:22681890
negative genetic interaction withSPAC186.09pyruvate decarboxylase (predicted) Negative GeneticPMID:22681890
positive genetic interaction withSPAC1F12.04cconserved fungal protein Positive GeneticPMID:22681890
negative genetic interaction withSPAC212.04cS. pombe specific DUF999 family protein 1 Negative GeneticPMID:22681890
positive genetic interaction withSPAC227.17cconserved protein Positive GeneticPMID:22681890
negative genetic interaction withSPAC31A2.12arrestin/PY protein 1 (predicted) Negative GeneticPMID:22681890
negative genetic interaction withSPAC750.08cNAD-dependent malic enzyme (predicted), partial Negative GeneticPMID:22681890
negative genetic interaction withSPBC1348.03S. pombe specific 5Tm protein family Negative GeneticPMID:22681890
negative genetic interaction withSPBC16H5.12cconserved fungal protein Negative GeneticPMID:22681890
positive genetic interaction withSPBC3H7.05cmitochondrial Membrane Bound O-Acyl Transferase (MBOAT) family Positive GeneticPMID:22681890
positive genetic interaction withSPBC725.04oxalyl-CoA decarboxylase (predicted) Positive GeneticPMID:22681890
negative genetic interaction withSPCC1020.05phosphoprotein phosphatase (predicted) Negative GeneticPMID:22681890
positive genetic interaction withspo15sporulation protein Spo15 Positive GeneticPMID:22681890
synthetically rescued byspp1DNA primase catalytic subunit Spp1 Synthetic RescuePMID:12589755
positive genetic interaction withsrb10cyclin-dependent protein Srb mediator subunit kinase Srb10 Positive GeneticPMID:22681890
synthetic growth defect withsrs2ATP-dependent DNA helicase, UvrD subfamily Synthetic Growth DefectPMID:18931302
negative genetic interaction withsrs2ATP-dependent DNA helicase, UvrD subfamily Negative GeneticPMID:18818364
positive genetic interaction withstm1G-protein coupled receptor Stm1 Positive GeneticPMID:22681890
positive genetic interaction withsum2G2/M transition checkpoint protein Sum2 Positive GeneticPMID:22681890
synthetically rescued byswd2Set1C complex subunit Swd2.1 Synthetic RescuePMID:12589755
synthetic growth defect withswi1replication fork protection complex subunit Swi1 Synthetic Growth DefectPMID:14560029
synthetic growth defect withswi10DNA repair endonuclease non-catalytic subunit Swi10 Synthetic Growth DefectPMID:18931302
synthetic growth defect withswi3replication fork protection complex subunit Swi3 Synthetic Growth DefectPMID:18931302
negative genetic interaction withswi3replication fork protection complex subunit Swi3 Negative GeneticPMID:18818364
rescued bytaz1human TRF ortholog Taz1 Phenotypic SuppressionPMID:12196391
synthetic growth defect withtlg2SNARE Tlg2 (predicted) Synthetic Growth DefectPMID:18931302
positive genetic interaction withtom70mitochondrial TOM complex subunit Tom70 (predicted) Positive GeneticPMID:22681890
rescued by overexpression oftop3DNA topoisomerase III Dosage RescuePMID:12023299
negative genetic interaction withvph2endoplasmic reticulum membrane protein involved in assembly of the V-ATPase (predicted) Negative GeneticPMID:22681890
negative genetic interaction withvps38phophatidylinositol 3-kinase complex subunit Vps38 Negative GeneticPMID:22681890
positive genetic interaction withvsl1vacuolar SNARE Vsl1/Vam7 Positive GeneticPMID:22681890
synthetic growth defect withwee1M phase inhibitor protein kinase Wee1 Synthetic Growth DefectPMID:20679488
negative genetic interaction withyps1aspartic protease, yapsin Yps1 Negative GeneticPMID:22681890
External References
Database Identifier Description
NBRP SPBC342.05 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC342.05 Retrieval of eukaryotic orthologs (Bähler Lab)
BioGrid SPBC342.05 BioGRID Interaction Datasets
Expression Viewer SPBC342.05 Cell Cycle Expression Profile (Bähler Lab)
Expression Viewer SPBC342.05 Meiosis/Sporulation Expression Profies (Bähler Lab)
Expression Viewer SPBC342.05 Pheromone response/mating expression profiles (Bähler Lab)
Expression Viewer SPBC342.05 Environmental stress expression profiles (Bähler Lab)
Pomb(A) SPBC342.05 Polyadenylation Viewer (Gullerova lab)
pombeTV SPBC342.05 Transcriptome Viewer (Bähler Lab)
Cyclebase SPBC342.05 Cell Cycle Data
GEO SPBC342.05 GEO profiles
PInt SPBC342.05 Protein-Protein Interaction Predictor (Bähler Lab)
PeptideAtlas SPBC342.05 Peptides identified in tandem mass spectrometry proteomics experiments
SYSGRO SPBC342.05 Fission yeast phenotypic data & analysis
SPD / RIKEN33/33G08Orfeome Localization Data
UniProtKB/SwissProtP87074DNA repair protein rhp9
ModBaseP87074Database of comparative protein structure models
STRINGP87074Network display of known and predicted interactions and functional associations
RefSeq PeptideNP_596748DNA repair protein
RefSeq mRNANM_001023768972h- DNA repair protein (crb2), mRNA
ePDB2FHDThe European PDB
PDB2FHDPDB
PDBsum2FHDPDBsum
ePDB2VXBThe European PDB
PDB2VXBPDB
PDBsum2VXBPDBsum
ePDB2VXCThe European PDB
PDB2VXCPDB
PDBsum2VXCPDBsum
ePDB4BU0The European PDB
PDB4BU0PDB
PDBsum4BU0PDBsum
ePDB4BU1The European PDB
PDB4BU1PDB
PDBsum4BU1PDBsum
European Nucleotide ArchiveBAA13093.1ENA Protein Mapping
European Nucleotide ArchiveCAA70582.1ENA Protein Mapping
European Nucleotide ArchiveCAB46775.1ENA Protein Mapping
UniParcUPI00001338AAUniProt Archive

Literature for crb2

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Release Version: PomBase:25_50 - 10 Mar 2015