SPBC3E7.07c

Synonyms ChromosomeII
ProductDUF757 family protein Gene Start2672919
Feature Typeprotein coding Gene End2671877
Name Description CDS Start2672744
Characterisation Statusconserved_unknown CDS End2671959

Ensembl Gene Location
SPNCRNA.1542 SPBC3E7.05c fnx2 > SPBC3E7.07c < rad13 SPBC3E7.09 SPNCRNA.1543 fma1
Transcript
Contact Curators | Back to Top
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
126729192672697
226726512672640
326725782672551
426725072672453
526723972672174
626720352671877

Protein Feature Information
Contact Curators | Back to Top

Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF04669 Pfam Xylan biosynthesis protein IRX15/IRX15L 17 145 82.1 1

Protein Properties

Ave. residue weight 118.40 Da
Charge -6.00
Isoelectric point 4.60
Molecular weight 17.40 kDa
Number of residues 147
Sequence
Contact Curators | Back to Top

Fission Yeast Phenotype

 Contact Curators | Back to Top
Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

 Contact Curators | Back to Top
Cellular Component
Contact Curators | Back to Top
GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634
GO:0005829cytosolIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005829

Species Distribution

 Contact Curators | Back to Top
DescriptionSourceAll Genes
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096

Manually Curated Orthologs

 Contact Curators | Back to Top
SpeciesGeneDescription


External References

 Contact Curators | Back to Top
Database Identifier Description
NBRP SPBC3E7.07c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC3E7.07c Retrieval of eukaryotic orthologs
BioGrid SPBC3E7.07c BioGRID Interaction Datasets
Bähler Lab SPBC3E7.07c Cell Cycle Expression Profile
Bähler Lab SPBC3E7.07c Meiosis/Sporulation Expression Profies
Bähler Lab SPBC3E7.07c Pheromone response/mating expression profiles
Bähler Lab SPBC3E7.07c Environmental stress expression profiles
Bähler Lab SPBC3E7.07c Bähler Lab Transcriptome Viewer
Cyclebase SPBC3E7.07c Cell Cycle Data
Entrez Gene SPBC3E7.07c Link to Entrez Gene
SPD / RIKEN09/09G11Orfeome Localization Data
UniProtKB/SwissProtO59727UPF0368 protein C3E7.07c
ArrayExpressO59727Link to ArrayExpress
RefSeq PeptideNP_596094DUF757 family protein
RefSeq mRNANM_001022010972h- DUF757 family protein (SPBC3E7.07c), mRNA
European Nucleotide ArchiveCU329671ENA EMBL mapping
European Nucleotide ArchiveCAA19020ENA Protein Mapping
UniParcUPI000006B187UniProt Archive

Literature for SPBC3E7.07c

 Contact Curators | Back to Top
Search: UK PMC or PubMed