meu18 (SPBC409.11)

Gene Standard Namemeu18 ChromosomeII
Systematic IDSPBC409.11 Gene Start1158533
Synonyms Gene End1160295
Productsequence orphan Gene Length1763
Feature Typeprotein coding CDS Start1158594
Name DescriptionMeiotic Expression Upregulated CDS End1160255
Characterisation Statussequence_orphan CDS Length1662

Ensembl Gene Location
  1. SPBC409.08
  2. mis13
  3. SPNCRNA.1416
  4. ade7
  5. SPNCRNA.568
  6. meu18
  7. SPNCRNA.1417
  8. SPBTRNAARG.05
  9. stn1
  10. tam7
  11. SPBC409.13
  12. mrps17
  13. SPNCRNA.1418
Fission Yeast Phenotype Ontology

Ontology Graph

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Term IDTerm NameEvidenceAlleleAllele TypeExpressionConditionReference
FYPO:0001491viable vegetative cellMicroscopymeu18delta (deletion)deletionPMID:20473289
GO Cellular Component

Ontology Graph

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Term IDTerm NameEvidenceWith/FromReference
GO:0005635nuclear envelopeIDAPMID:16823372
GO:0005737cytoplasmIDAPMID:16823372
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
111585331160295

References

Region Start End Reference
three_prime_UTR11602561160295PMID:20118936
three_prime_UTR11602561160295PMID:18641648
Protein Features
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Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID InterPro Database Description Start End All Genes
TMhelix TMHMM 21 43 955
Coil ncoils Rabaptin coiled-coil domain 441 462 974

View domain organization at Pfam

Sequence Ontology

Term IDTerm NameReference
SO:0000418signal_peptide
SO:0001528nuclear_localization_signalPMID:11376151

Protein Properties

Ave. residue weight 117.17 Da
Charge 10.00
Isoelectric point 8.18
Molecular weight 64.79 kDa
Number of residues 553
Sequence
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Gene Expression
DescriptionEvidenceDuringConditionRangeAverage per CellReference
expressed during meiosis PMID:16303567 PMID:11376151
protein levelexperimental evidencevegetative growth of a single-celled organismPECO:0000005,
PECO:0000014		population_widePMID:23101633
experimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127		population_widePMID:23101633
RNA levelexperimental evidencevegetative growth of a single-celled organismPECO:0000014,
PECO:0000005		population_wide1.3PMID:23101633
experimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000127,
PECO:0000014,
PECO:0000005		population_wide0.36PMID:23101633
Species Distribution
DescriptionQualifierReference
identified in S. pombe only
sequence orphan
sequence orphan, uncharacterised
no apparent orthologs
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Genetic Interactions

Source: BioGRID

Gene Product Evidence Reference
dsc1Golgi Dsc E3 ligase complex subunit Dsc1 Negative GeneticPMID:21504829
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External References
Database Identifier Description
NBRP SPBC409.11 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC409.11 Retrieval of eukaryotic orthologs
BioGrid SPBC409.11 BioGRID Interaction Datasets
Bähler Lab SPBC409.11 Cell Cycle Expression Profile
Bähler Lab SPBC409.11 Meiosis/Sporulation Expression Profies
Bähler Lab SPBC409.11 Pheromone response/mating expression profiles
Bähler Lab SPBC409.11 Environmental stress expression profiles
Bähler Lab SPBC409.11 Bähler Lab Transcriptome Viewer
Cyclebase SPBC409.11 Cell Cycle Data
PInt SPBC409.11 Bähler Lab Protein-Protein Interaction Predictor
Entrez Gene SPBC409.11 Entrez Gene
SPD / RIKEN34/34G12Orfeome Localization Data
EntrezGene2540957sequence orphan
Uniprot_genenameMEU18
WikiGene2540957sequence orphan
UniProtKB/SwissProtQ9UUB3Meiotic expression up-regulated protein 18
ModBaseQ9UUB3Database of comparative protein structure models
Pfam Protein DomainsQ9UUB3Pfam Domain Arrangement
RefSeq PeptideNP_595461sequence orphan
RefSeq mRNANM_001021371972h- sequence orphan (meu18), mRNA
European Nucleotide ArchiveBAB60871ENA Protein Mapping
European Nucleotide ArchiveCAB52613ENA Protein Mapping
SPD / RIKEN34/34G12Orfeome Localization Data

Literature for meu18
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Search: UK PMC or PubMed

Release Version: PomBase:18.34 - 04 Apr 2013