SPBC543.02c

Synonyms ChromosomeII
ProductDNAJ/TPR domain protein DNAJC7 family Gene Start4302738
Feature Typeprotein coding Gene End4300746
Name Description CDS Start4302615
Characterisation Statusconserved_unknown CDS End4301185

Ensembl Gene Location
ppr7 SPBC16A3.02c spn3 > SPBC543.02c < pku80 SPBC543.04 SPBC543.05c
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
143027384300746

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF00226 Pfam Heat shock protein DnaJ, N-terminal 349 411 92.9 25
PF07719 Pfam Tetratricopeptide TPR2 178 209 29.7 5
PF07719 Pfam Tetratricopeptide TPR2 228 256 28.1 5
PF00515 Pfam Tetratricopeptide TPR-1 28 52 23.5 12
48452 Superfamily 29 396 95 43
SM00271 Smart Heat shock protein DnaJ, N-terminal 348 406 116.9 25
SM00028 Smart Tetratricopeptide repeat 23 56 28.2 17
SM00028 Smart Tetratricopeptide repeat 177 210 27.7 17
SM00028 Smart Tetratricopeptide repeat 223 256 23.4 17
SM00028 Smart Tetratricopeptide repeat 261 294 22.7 17
SM00028 Smart Tetratricopeptide repeat 295 328 20.9 17
SM00028 Smart Tetratricopeptide repeat 59 92 11.8 17
SM00028 Smart Tetratricopeptide repeat 143 176 8 17
PS50005 PROSITE Tetratricopeptide repeat 23 56 9.883 23
PS50005 PROSITE Tetratricopeptide repeat 59 92 6.785 23
PS50005 PROSITE Tetratricopeptide repeat 143 176 7.611 23
PS50005 PROSITE Tetratricopeptide repeat 177 210 10.886 23
PS50005 PROSITE Tetratricopeptide repeat 223 256 11.21 23
PS50005 PROSITE Tetratricopeptide repeat 261 294 6.844 23
PS50005 PROSITE Tetratricopeptide repeat 295 328 6.608 23
PS50076 PROSITE Heat shock protein DnaJ, N-terminal 349 414 21.194 24
PS50293 PROSITE Tetratricopeptide repeat-containing domain 23 328 36.31 27
PR00625 Prints Heat shock protein DnaJ 351 369 58.74 21
PR00625 Prints Heat shock protein DnaJ 369 384 59.8 21
PR00625 Prints Heat shock protein DnaJ 386 406 51.56 21

Protein Properties

Ave. residue weight 111.99 Da
Charge 1.00
Isoelectric point 6.81
Molecular weight 53.30 kDa
Number of residues 476
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124
FYPO:0000054abnormal microtubule organizationTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000054

Gene Ontology Annotations

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Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005829cytosolIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005829

Molecular Function
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0030544Hsp70 protein bindingISS PFAM:PF00226GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0030544
GO:0051082unfolded protein bindingIEAGO_REF:0000002Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0051082

Protein Family

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DescriptionSourceAll Genes
TPR repeat proteinTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000245

Species Distribution

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DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
no apparent S. cerevisiae orthologTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000055
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094


External References

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Database Identifier Description
NBRP SPBC543.02c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC543.02c Retrieval of eukaryotic orthologs
BioGrid SPBC543.02c BioGRID Interaction Datasets
Bähler Lab SPBC543.02c Cell Cycle Expression Profile
Bähler Lab SPBC543.02c Meiosis/Sporulation Expression Profies
Bähler Lab SPBC543.02c Pheromone response/mating expression profiles
Bähler Lab SPBC543.02c Environmental stress expression profiles
Bähler Lab SPBC543.02c Bähler Lab Transcriptome Viewer
Cyclebase SPBC543.02c Cell Cycle Data
Entrez Gene SPBC543.02c Link to Entrez Gene
SPD / RIKEN33/33A05Orfeome Localization Data
UniProtKB/SwissProtQ9HGM9DnaJ homolog subfamily C member 7 homolog
ArrayExpressQ9HGM9Link to ArrayExpress
RefSeq PeptideNP_596790DNAJ/TPR domain protein DNAJC7 family
RefSeq mRNANM_001023810972h- DNAJ/TPR domain protein DNAJC7 family (SPBC543.02c), mRNA
European Nucleotide ArchiveCU329671ENA EMBL mapping
European Nucleotide ArchiveCAC05244ENA Protein Mapping
UniParcUPI000006956BUniProt Archive

Literature for SPBC543.02c

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Search: UK PMC or PubMed