SPBC609.01

Synonyms ChromosomeII
Productribonuclease II (RNB) family Gene Start3155857
Feature Typeprotein coding Gene End3161616
Name Description CDS Start3157597
Characterisation Statusconserved_unknown CDS End3161212

Ensembl Gene Location
SPNCRNA.1582 SPNCRNA.541 SPBC405.06 SPNCRNA.414 rpl3602 SPNCRNA.1583 SPNCRNA.415 > SPBC609.01 < ptn1 SPNCRNA.1584 iqw1 caf5
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
131558573157717
231578603161616

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF00773 Pfam Ribonuclease II/R 619 923 186.3 5
SM00955 Smart Ribonuclease II/R 605 924 144.4 5

Protein Properties

Ave. residue weight 111.13 Da
Charge 14.50
Isoelectric point 7.58
Molecular weight 128.58 kDa
Number of residues 1157
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000049inviableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000049

Gene Ontology Annotations

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Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005737cytoplasmIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005737
GO:0005829cytosolIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005829

Molecular Function
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0003723RNA bindingISS Interpro:IPR001900GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0003723
GO:0004540ribonuclease activityISS Interpro:IPR001900GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0004540

Species Distribution

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DescriptionSourceAll Genes
conserved in BacteriaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000086
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
no apparent S. cerevisiae orthologTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000055
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094


External References

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Database Identifier Description
NBRP SPBC609.01 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC609.01 Retrieval of eukaryotic orthologs
BioGrid SPBC609.01 BioGRID Interaction Datasets
Bähler Lab SPBC609.01 Cell Cycle Expression Profile
Bähler Lab SPBC609.01 Meiosis/Sporulation Expression Profies
Bähler Lab SPBC609.01 Pheromone response/mating expression profiles
Bähler Lab SPBC609.01 Environmental stress expression profiles
Bähler Lab SPBC609.01 Bähler Lab Transcriptome Viewer
Cyclebase SPBC609.01 Cell Cycle Data
Entrez Gene SPBC609.01 Link to Entrez Gene
SPD / RIKEN48/48E03Orfeome Localization Data
UniProtKB/SwissProtO94525Uncharacterized ribonuclease C609.01
ArrayExpressO94525Link to ArrayExpress
RefSeq PeptideNP_596311ribonuclease II (RNB) family
RefSeq mRNANM_001022233972h- ribonuclease II (RNB) family (SPBC609.01), mRNA
European Nucleotide ArchiveCU329671ENA EMBL mapping
European Nucleotide ArchiveCAA22830ENA Protein Mapping
UniParcUPI000006AFB9UniProt Archive

Literature for SPBC609.01

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Search: UK PMC or PubMed