pob3 (SPBC609.05)

Gene Standard Namepob3 ChromosomeII
Systematic IDSPBC609.05 Gene Start3169409
Synonyms Gene End3171345
ProductFACT complex subunit Pob3 Gene Length1937
Feature Typeprotein coding CDS Start3169409
Name Description CDS End3171006
Characterisation Statuspublished CDS Length1598

Ensembl Gene Location
  1. ptn1
  2. SPNCRNA.1584
  3. iqw1
  4. caf5
  5. SPNCRNA.1585
  6. pob3
  7. SPRRNA.41
  8. rpl29
  9. snR93
  10. dis2
  11. SPBC776.03
Fission Yeast Phenotype Ontology

Ontology Graph

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Term IDTerm NameEvidenceAlleleAllele TypeExpressionConditionReference
FYPO:0000096sensitive to cadmiumCell growth assaypob3delta (deletion)deletionPECO:0000012PMID:18684775
FYPO:0002060viable vegetative cell populationMicroscopypob3delta (deletion)deletionPMID:20473289
no_name (unrecorded)unrecordedPMID:17614284
GO Molecular Function

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Term IDTerm NameEvidenceWith/FromReference
GO:0003677DNA bindingISMPFAM:PF03531GO_REF:0000001
GO:0005515protein bindingIPIspt16PMID:17614284
GO Biological Process

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Term IDTerm NameEvidenceWith/FromReference
GO:0000070mitotic sister chromatid segregationIMPPMID:17614284
GO:0006260DNA replicationIEAUniProtKB:KW-0235GO_REF:0000037
GO:0006281DNA repairIEAUniProtKB:KW-0234GO_REF:0000037
GO:0006334nucleosome assemblyISOSGD:S000004534GO_REF:0000024
GO:0030466chromatin silencing at silent mating-type cassetteIMPPMID:17614284
GO:0030702chromatin silencing at centromereIMPPMID:17614284
GO:0034613cellular protein localization
has_input swi6IMPPMID:17614284
GO:0043486histone exchangeICGO:0035101GO_REF:0000001
GO:0045899positive regulation of RNA polymerase II transcriptional preinitiation complex assemblyISOSGD:S000004534GO_REF:0000024
GO:0071276cellular response to cadmium ionIMPPMID:18684775
GO:0071585detoxification of cadmium ionIMPPMID:18684775
GO Cellular Component

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Term IDTerm NameEvidenceWith/FromReference
GO:0000790nuclear chromatinISSUniProtKB:Q04636GO_REF:0000001
GO:0005634nucleusIDAPMID:17614284
IDAPMID:16823372
GO:0005829cytosolIDAPMID:16823372
GO:0035101FACT complexIDAPMID:17614284
GO:0043596nuclear replication forkISSUniProtKB:Q04636GO_REF:0000001
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
131694093169645
231697053171345

References

Region Start End Reference
three_prime_UTR31710073171345PMID:20118936
three_prime_UTR31710073171345PMID:20118936
three_prime_UTR31710073171345PMID:18641648
three_prime_UTR31710073171345PMID:18641648
Protein Features
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Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID InterPro Database Description Start End All Genes
PF03531 IPR024954 Pfam SSRP1 domain 74 300 1
PF08512 IPR013719 Pfam Domain of unknown function DUF1747 354 445 3
G3DSA:2.30.29.30 IPR011993 Gene3D 4 106 35
SSF50729 SuperFamily 209 445 36
PR00887 IPR000969 PRINTS Structure-specific recognition protein 334 347 1
PR00887 IPR000969 PRINTS Structure-specific recognition protein 246 262 1
PR00887 IPR000969 PRINTS Structure-specific recognition protein 421 439 1
PR00887 IPR000969 PRINTS Structure-specific recognition protein 361 379 1
PR00887 IPR000969 PRINTS Structure-specific recognition protein 379 396 1
PR00887 IPR000969 PRINTS Structure-specific recognition protein 405 421 1
PR00887 IPR000969 PRINTS Structure-specific recognition protein 224 240 1
PR00887 IPR000969 PRINTS Structure-specific recognition protein 269 285 1
PTHR13711 hmmpanther 350 466 5
PTHR13711:SF40 hmmpanther 350 466 1

View domain organization at Pfam

Protein Properties

Ave. residue weight 112.22 Da
Charge -42.00
Isoelectric point 4.16
Molecular weight 57.46 kDa
Number of residues 512
Sequence
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Gene Expression
DescriptionEvidenceDuringConditionRangeAverage per CellReference
protein levelexperimental evidencesingle-celled organism vegetative growth phasePECO:0000014,
PECO:0000005		population_wide16775.15PMID:23101633
experimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000127,
PECO:0000014,
PECO:0000005		population_wide11153.93PMID:23101633
RNA levelexperimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000127,
PECO:0000014,
PECO:0000005		population_wide0.79PMID:23101633
experimental evidencesingle-celled organism vegetative growth phasePECO:0000014,
PECO:0000005		population_wide5.5PMID:23101633
Miscellaneous Functional Group
DescriptionQualifierReference
histone chaperone
Species Distribution
DescriptionQualifierReference
predominantly single copy (one to one)
conserved in fungi
conserved in eukaryotes
conserved in metazoa
conserved in vertebrates
conserved in eukaryotes only
Manually curated orthologous groups
SpeciesGeneDescription

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Genetic Interactions

Source: BioGRID

Gene Product Evidence Reference
rhn1RNA polymerase II transcription termination factor homolog Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
snz1pyridoxine biosynthesis protein Negative GeneticPMID:22681890
SPAC13G7.11mitochondrial respiratory complex assembly protein (predicted) Negative GeneticPMID:22681890
usp103U1 snRNP-associated protein Usp103 (predicted) Positive GeneticPMID:18818364
SPAC26H5.04vacuolar import and degradation protein Vid28 (predicted) Negative GeneticPMID:18818364
SPCC306.11sequence orphan Negative GeneticPMID:22681890
SPAC1A6.01chuman thyroid receptor interacting protein homolog, transcription coactivator (predicted) Negative GeneticPMID:22681890
rrg9mitochondrial genome maintenance protein Rrg9 (predicted) Negative GeneticPMID:22681890
fsv1SNARE Fsv1 Negative GeneticPMID:22681890
mug33conserved fungal protein Positive GeneticPMID:22681890
pmc5mediator complex subunit Pmc5 Negative GeneticPMID:18818364
sec72Sec7 domain protein, ARF GEF Sec72 Positive GeneticPMID:22681890
SPCC70.10sequence orphan Negative GeneticPMID:22681890
tpp1trehalose-6-phosphate phosphatase Tpp1 Negative GeneticPMID:22681890
mug28RNA-binding protein Mug28 Positive GeneticPMID:18818364
mst2histone acetyltransferase Mst2 Negative GeneticPMID:22681890
hip1hira protein, histone chaperone Hip1 Negative GeneticPMID:18818364
mus7DNA repair protein Mus7/Mms22 Negative GeneticPMID:22681890
pek1MAP kinase kinase Pek1 Negative GeneticPMID:22681890
psh3ER chaperone SHR3 homologue Psh3 Negative GeneticPMID:22681890
mcl1DNA polymerase alpha accessory factor Mcl1 Negative GeneticPMID:18818364
clr3histone deacetylase (class II) Clr3 Negative GeneticPMID:18818364
mug154conserved fungal protein Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
SPAC1610.02cmitochondrial ribosomal protein subunit L1 (predicted) Negative GeneticPMID:22681890
pmc2mediator complex subunit Pmc2/Med1 Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
hta1histone H2A alpha Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
rpl210260S ribosomal protein L21 (predicted) Negative GeneticPMID:22681890
nap1nucleosome assembly protein Nap1 Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
ask1DASH complex subunit Ask1 Negative GeneticPMID:18818364
erd1Erd1 homolog (predicted) Negative GeneticPMID:22681890
SPCC1919.05Ski complex TPR repeat subunit Ski3 (predicted) Positive GeneticPMID:22681890
SPCC18B5.05cphosphomethylpyrimidine kinase (predicted) Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
bdf1Swr1 complex bromodomain subunit Brf1 Negative GeneticPMID:18818364
dnm1dynamin Dnm1 Negative GeneticPMID:18818364
mrc1mediator of replication checkpoint 1 Negative GeneticPMID:18818364
SPBC1198.01glutathione-dependent formaldehyde dehydrogenase (predicted) Negative GeneticPMID:22681890
caf4CCR4-Not complex subunit Caf4/Mdv1 (predicted) Positive GeneticPMID:18818364
rcd1RNA-binding protein, CCR4-NOT complex subunit Rcd1 Negative GeneticPMID:22681890
gpa2heterotrimeric G protein alpha-2 subunit Gpa2 Negative GeneticPMID:22681890
twf1twinfilin (predicted) Negative GeneticPMID:22681890
SPAC139.01cnuclease, XP-G family (predicted) Positive GeneticPMID:22681890
SPBC9B6.11cCCR4/nocturin family endoribonuclease (predicted) Positive GeneticPMID:22681890
swc3Swr1 complex subunit Swc3 Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
nup132nucleoporin Nup132 Negative GeneticPMID:22681890
seh1nucleoporin Seh1 Negative GeneticPMID:22681890
SPCC1840.09NAD dependent epimerase/dehydratase family protein Negative GeneticPMID:22681890
met16phosphoadenosine phosphosulfate reductase Negative GeneticPMID:22681890
mhf2FANCM-MHF complex subunit Mhf2 Negative GeneticPMID:22681890
SPAC8C9.04sequence orphan Positive GeneticPMID:22681890
rps340S ribosomal protein S3 (predicted) Negative GeneticPMID:22681890
SPBC36B7.08cnucleosome assembly protein (predicted) Negative GeneticPMID:18818364
rad26ATRIP, ATR checkpoint kinase regulatory subunit Rad26 Negative GeneticPMID:18818364
ist1MVB sorting pathway protein (predicted) Negative GeneticPMID:22681890
cnp1centromere-specific histone H3 CENP-A Dosage LethalityPMID:23028377
imp1importin alpha Negative GeneticPMID:22681890
SPAC12B10.01cubiquitin-protein ligase E3 (predicted) Positive GeneticPMID:18818364
SPAC977.17MIP water channel (predicted) Positive GeneticPMID:22681890
asp1inositol hexakisphosphate kinase/inositol pyrophosphate synthase (predicted) Negative GeneticPMID:22681890
SPBC651.04sequence orphan Negative GeneticPMID:22681890
rpa12DNA-directed RNA polymerase complex I subunit Rpa12 Negative GeneticPMID:18818364
tco89TORC1 subunit Tco89 Negative GeneticPMID:22681890
pso2DNA 5' exonuclease (predicted) Positive GeneticPMID:22681890
gyp1GTPase activating protein Gyp1 (predicted) Negative GeneticPMID:22681890
epe1Jmjc domain chromatin associated protein Epe1 Positive GeneticPMID:18818364
elp3elongator complex, histone acetyltransferase subunit Elp3 (predicted) Negative GeneticPMID:18818364
SPAC30C2.07sequence orphan Negative GeneticPMID:22681890
ies4Ino80 complex subunit Ies4 Negative GeneticPMID:22681890
ef1a-atranslation elongation factor EF-1 alpha Ef1a-a Positive GeneticPMID:22681890
hrp3ATP-dependent DNA helicase Hrp3 Positive GeneticPMID:22681890
Positive GeneticPMID:18818364
mlo2ubiquitin protein ligase E3 component human N-recognin 7 homolog Mlo2 Negative GeneticPMID:22681890
mcs2TFIIH complex cyclin Mcs2 Negative GeneticPMID:22681890
hus1checkpoint clamp complex protein Hus1 Negative GeneticPMID:22681890
mug123meiotically upregulated gene Mug123 Negative GeneticPMID:22681890
tma23ribosome biogenesis protein Tma23 (predicted) Positive GeneticPMID:22681890
Positive GeneticPMID:18818364
SPBC354.09cTre1 family protein, involved in vacuolar protein degradation (predicted) Positive GeneticPMID:18818364
ser2phosphoserine phosphatase Ser2 (predicted) Negative GeneticPMID:18818364
mis18kinetochore protein Mis18 Synthetic LethalityPMID:23028377
lag1sphingosine N-acyltransferase Lag1 Positive GeneticPMID:22681890
not2CCR4-Not complex subunit Not2 (predicted) Negative GeneticPMID:18818364
SPAC1071.09cDNAJ domain protein, DNAJC9 family (predicted) Negative GeneticPMID:22681890
SPAC10F6.13caspartate aminotransferase (predicted) Negative GeneticPMID:22681890
rdp1RNA-directed RNA polymerase Rdp1 Negative GeneticPMID:18818364
dbr1RNA lariat debranching enzyme Dbr1 Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
SPBC16H5.13WD repeat protein, human WDR7 ortholog Negative GeneticPMID:18818364
tma20RNA-binding protein Tma20 (predicted) Positive GeneticPMID:22681890
pcf1CAF assembly factor (CAF-1) complex large subunit Pcf1 Phenotypic EnhancementPMID:19547744
SPAC9G1.05actin cortical patch component Aip1 (predicted) Negative GeneticPMID:22681890
nse6Smc5-6 complex non-SMC subunit Nse6 Negative GeneticPMID:22681890
ura5orotate phosphoribosyltransferase Ura5 Negative GeneticPMID:18818364
SPAC1805.14sequence orphan Positive GeneticPMID:22681890
mug80cyclin Clg1 (predicted) Negative GeneticPMID:22681890
rad9checkpoint clamp complex protein Rad9 Negative GeneticPMID:18818364
SPAC222.08cglutamine aminotransferase subunit (predicted) Negative GeneticPMID:22681890
moe1translation initiation factor eIF3d Moe1 Negative GeneticPMID:22681890
crb2DNA repair protein Rad9 homolog, Rhp9 Negative GeneticPMID:22681890
not3CCR4-Not complex subunit Not3/5 (predicted) Negative GeneticPMID:18818364
arp6actin-like protein Arp6 Negative GeneticPMID:18818364
dsk1SR protein-specific kinase Dsk1 Positive GeneticPMID:22681890
rad3ATR checkpoint kinase Rad3 Phenotypic EnhancementPMID:19547744
pht1histone H2A variant H2A.Z, Pht1 Negative GeneticPMID:22681890
asl1cell wall protein Asl1, predicted O-glucosyl hydrolase Positive GeneticPMID:22681890
rad51RecA family recombinase Rad51/Rhp51 Negative GeneticPMID:18818364
png2ING family homolog Png2 Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
cho1phosphatidyl-N-methylethanolamine N-methyltransferase (predicted) Positive GeneticPMID:22681890
Positive GeneticPMID:18818364
git5heterotrimeric G protein beta subunit Git5 Negative GeneticPMID:22681890
kap114karyopherin Kap14 Negative GeneticPMID:18818364
SPCC548.05cubiquitin-protein ligase E3 (predicted) Negative GeneticPMID:18818364
pcf2CAF assembly factor (CAF-1) complex subunit B, Pcf2 Negative GeneticPMID:22681890
pmt3SUMO Negative GeneticPMID:22681890
cip2RNA-binding protein Cip2 Negative GeneticPMID:22681890
SPAC13G6.09SSU-rRNA maturation protein Tsr4 homolog 2 (predicted) Negative GeneticPMID:22681890
cpd1tRNA (m1A) methyltransferase complex catalytic subunit Cpd1 Negative GeneticPMID:18818364
SPBC31F10.10czf-MYND type zinc finger protein Negative GeneticPMID:18818364
alg6glucosyltransferase Alg6 (predicted) Negative GeneticPMID:22681890
SPBC56F2.08cRNA-binding protein (predicted) Negative GeneticPMID:22681890
ssu72phosphoric ester hydrolase Ssu72 (predicted) Negative GeneticPMID:18818364
csn1COP9/signalosome complex subunit Csn1 Negative GeneticPMID:18818364
ptf2sequence orphan Negative GeneticPMID:22681890
SPCC18.13tRNA (guanine-N7-)-methyltransferase subunit Trm82 (predicted) Negative GeneticPMID:22681890
alp14TOG ortholog Alp14 Negative GeneticPMID:18818364
ssb3DNA replication factor A subunit Ssb3 Negative GeneticPMID:22681890
sdc1Dpy-30 domain protein Sdc1 Negative GeneticPMID:18818364
mug70conserved protein Mug20 Negative GeneticPMID:22681890
rad17RFC related checkpoint protein Rad17 Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
mto1MT organizer Mto1 Negative GeneticPMID:22681890
akr1palmitoyltransferase Akr1 (predicted) Negative GeneticPMID:22681890
nep2NEDD8 protease Nep2 Positive GeneticPMID:22681890
ash2Ash2-trithorax family protein Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
fin1serine/threonine protein kinase, NIMA related Fin1 Negative GeneticPMID:18818364
hob3BAR adaptor protein Hob3 Positive GeneticPMID:22681890
dcc1Ctf18 RFC-like complex subunit Dcc1 Negative GeneticPMID:22681890
pun1SUR7 family protein Pun1 (predicted) Negative GeneticPMID:22681890
trm8tRNA (guanine-N7-)-methyltransferase catalytic subunit Trm8 (predicted) Negative GeneticPMID:22681890
SPCC594.04csteroid oxidoreductase superfamily protein (predicted) Negative GeneticPMID:22681890
tsc1hamartin Negative GeneticPMID:22681890
SPBC16C6.05mitochondrial translation initiation factor (predicted) Positive GeneticPMID:18818364
SPAC17H9.13cglutamate 5-kinase (predicted) Negative GeneticPMID:22681890
mei4meiotic forkhead transcription factor Mei4 Positive GeneticPMID:18818364
SPAC1B3.02ctranscription elongation factor, Elf1 family (predicted) Negative GeneticPMID:22681890
pmk1MAP kinase Pmk1 Negative GeneticPMID:18818364
SPBC16C6.03cribosome assembly protein (predicted) Negative GeneticPMID:22681890
rdh54ATP-dependent DNA helicase Rdh54 Negative GeneticPMID:18818364
SPCC16C4.20cHMG box protein (predicted) Negative GeneticPMID:22681890
eca39branched chain amino acid aminotransferase Eca39 Negative GeneticPMID:22681890
arp42SWI/SNF and RSC complex subunit Arp42 Negative GeneticPMID:18818364
alm1medial ring protein Alm1 Negative GeneticPMID:22681890
SPCC18.10pyridoxine-pyridoxal-pyridoxamine kinase (predicted) Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
swr1SNF2 family helicase Swr1 Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
bdc1bromodomain containing protein 1, Bdc1 Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
mis6inner centromere protein, CENP-I ortholog Mis6 Synthetic LethalityPMID:23028377
csk1cyclin-dependent kinase activating kinase Csk1 Negative GeneticPMID:22681890
SPAC24B11.08cCOPII-coated vesicle component Erv46 (predicted) Positive GeneticPMID:22681890
ers1RNA-silencing factor Ers1 Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
chp1chromodomain protein Chp1 Negative GeneticPMID:18818364
SPBC3F6.01cserine/threonine protein phosphatase (predicted) Positive GeneticPMID:18818364
ubc16ubiquitin conjugating enzyme Ubc16 (predicted) Negative GeneticPMID:22681890
hat1histone acetyltransferase Hat1 Negative GeneticPMID:22681890
gcd10tRNA (m1A) methyltransferase, translation initiation factor eIF-3 gamma subunit Gcd10 (predicted) Negative GeneticPMID:22681890
set3histone lysine methyltransferase Set3 Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
res2MBF transcription factor complex subunit Res2 Negative GeneticPMID:18818364
spe1ornithine decarboxylase Spe1 (predicted) Negative GeneticPMID:22681890
SPBC839.03cneddylation protein Dcn1 (predicted) Negative GeneticPMID:22681890
SPAC19B12.11czinc finger protein, human ZNF593 ortholog Negative GeneticPMID:18818364
hrq1RecQ type DNA helicase Hrq1 (predicted) Negative GeneticPMID:22681890
ilv1acetolactate synthase catalytic subunit Negative GeneticPMID:22681890
rnc1RNA-binding protein that suppresses calcineurin deletion Rnc1 Negative GeneticPMID:22681890
ies2Ino80 complex subunit Ies2 Negative GeneticPMID:18818364
vht1vitamin H transporter Vth1 Negative GeneticPMID:22681890
SPCC594.06cvacuolar SNARE Vam7 (predicted) Negative GeneticPMID:22681890
mak10NatC N-acetyltransferase complex subunit Mak10 (predicted) Negative GeneticPMID:22681890
air1zinc knuckle TRAMP complex subunit Air1 Negative GeneticPMID:18818364
rud3Golgi matrix protein Rud3 (predicted) Negative GeneticPMID:22681890
swc5Swr1 complex subunit Swc5 Negative GeneticPMID:18818364
trm112protein and tRNA methyltransferase regulatory subunit Trm112 (predicted) Negative GeneticPMID:22681890
atg18WD repeat protein involved in autophagy Atg18a Positive GeneticPMID:18818364
SPAC12G12.07cconserved fungal protein Negative GeneticPMID:22681890
vps71Swr1 complex subunit Vps71 Negative GeneticPMID:18818364
SPAC30C2.04cofactor for methionyl-and glutamyl-tRNA synthetases (predicted) Positive GeneticPMID:22681890
med20mediator complex subunit Med20 Negative GeneticPMID:18818364
fkbp39FKBP-type peptidyl-prolyl cis-trans isomerase (predicted) Negative GeneticPMID:18818364
ell1RNA polymerase II transcription elongation factor SpELL Positive GeneticPMID:22681890
swc2Swr1 complex complex subunit Swc2 Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
nup37WD repeat protein, nucleoporin Nup37 (predicted) Positive GeneticPMID:18818364
amt1ammonium transporter Amt1 Positive GeneticPMID:22681890
fft3fun thirty related protein Fft3 Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
tcg1single-stranded telomeric binding protein Tgc1 Positive GeneticPMID:22681890
SPAC824.04WD repeat protein (predicted) Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
lsb5cortical component Lsb5 (predicted) Negative GeneticPMID:18818364
rlp1RecA family ATPase Rlp1 Positive GeneticPMID:22681890
SPAC227.06Rab GTPase binding (predicted) Positive GeneticPMID:22681890
msy2MS ion channel protein 2 (predicted) Positive GeneticPMID:22681890
ccr4CCR4-Not complex subunit Ccr4 (predicted) Negative GeneticPMID:18818364
scs7sphingosine hydroxylase Scs7 Positive GeneticPMID:22681890
klp6kinesin-like protein Klp6 Negative GeneticPMID:18818364
SPBC947.06cspermidine family transporter (predicted) Negative GeneticPMID:22681890
hos2histone deacetylase (class I) Hos2 Negative GeneticPMID:18818364
btb2BTB/POZ domain protein Btb2 Negative GeneticPMID:22681890
mre11Mre11 nuclease Negative GeneticPMID:18818364
snt2Lid2 complex subunit Snt2 Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
SPAC10F6.08cHMG box protein Negative GeneticPMID:22681890
ulp2SUMO deconjugating cysteine peptidase Ulp2 (predicted) Negative GeneticPMID:22681890
nrc1bromodomain protein (predicted) Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
SPAC12G12.11cDUF544 family protein Negative GeneticPMID:22681890
rad1checkpoint clamp complex protein Rad1 Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
mms1E3 ubiquitin ligase complex subunit Mms1 (predicted) Negative GeneticPMID:22681890
shk2PAK-related kinase Shk2 Negative GeneticPMID:18818364
ckb2CK2 family regulatory subunit (predicted) Negative GeneticPMID:18818364
mms19Dos2 silencing complex subunit Mms19 Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
tdp1tyrosyl-DNA phosphodiesterase Tdp1 Negative GeneticPMID:18818364
SPAC4A8.06cesterase/lipase (predicted) Negative GeneticPMID:22681890
mug20sequence orphan Positive GeneticPMID:22681890
rsc4RSC complex subunit Rsc4 Negative GeneticPMID:22681890
arp8actin-like protein, Ino80 complex subunit Arp8 Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
pcf3CAF assembly factor (CAF-1) complex subunit C, Pcf3 Negative GeneticPMID:18818364
eme1Holliday junction resolvase subunit Eme1 Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
msc1multi-copy suppressor of Chk1 Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
sat1Golgi membrane exchange factor subunit Sat1 (predicted) Negative GeneticPMID:18818364
SPAC1071.03csequence orphan Negative GeneticPMID:22681890
dcr1dicer Negative GeneticPMID:18818364
red1RNA elimination defective protein Red1 Negative GeneticPMID:22681890
atg22vacuolar amino acid efflux transporter Atg22 Negative GeneticPMID:22681890
pab2poly(A) binding protein Pab2 Negative GeneticPMID:22681890
Negative GeneticPMID:18818364
tif452translation initiation factor eIF4E 4F complex subunit Negative GeneticPMID:22681890
SPBPB2B2.09c2-dehydropantoate 2-reductase (predicted) Positive GeneticPMID:22681890
SPAC23C4.09cDNA-binding TFAR19-related protein (predicted) Negative GeneticPMID:22681890
cay1cactin, spliceosome complex subunit (predicted) Negative GeneticPMID:18818364
SPCC24B10.18human Leydig cell tumor 10 kDa protein homolog Negative GeneticPMID:22681890
ada1adenosine deaminase Ada1 (predicted) Positive GeneticPMID:22681890
SPBC106.13ubiquitin ligase complex subunit, involved in proteasome-dependent catabolite inactivation of FBPase (predicted) Negative GeneticPMID:22681890
hip4histone promoter control protein Hip4 Phenotypic EnhancementPMID:19547744
Physical Interactions

Source: BioGRID

Gene Product Evidence Reference
cbf11CBF1/Su(H)/LAG-1 family transcription factor Cbf11 Affinity Capture-MSPMID:22540037
Contact Curators
External References
Database Identifier Description
NBRP SPBC609.05 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC609.05 Retrieval of eukaryotic orthologs
BioGrid SPBC609.05 BioGRID Interaction Datasets
Bähler Lab SPBC609.05 Cell Cycle Expression Profile
Bähler Lab SPBC609.05 Meiosis/Sporulation Expression Profies
Bähler Lab SPBC609.05 Pheromone response/mating expression profiles
Bähler Lab SPBC609.05 Environmental stress expression profiles
Bähler Lab SPBC609.05 Bähler Lab Transcriptome Viewer
Cyclebase SPBC609.05 Cell Cycle Data
PInt SPBC609.05 Bähler Lab Protein-Protein Interaction Predictor
Entrez Gene SPBC609.05 Entrez Gene
WikiGene2541088FACT complex component Pob3
Uniprot_genenamePOB3
EntrezGene2541088FACT complex component Pob3
SPD / RIKEN25/25F06Orfeome Localization Data
UniProtKB/SwissProtO94529FACT complex subunit pob3
ModBaseO94529Database of comparative protein structure models
Pfam Protein DomainsO94529Pfam Domain Arrangement
RefSeq PeptideNP_596315FACT complex component Pob3
RefSeq mRNANM_001022237972h- FACT complex component Pob3 (pob3), mRNA
European Nucleotide ArchiveCAA22834ENA Protein Mapping
UniParcUPI000006C66FUniProt Archive

Literature for pob3
Contact Curators

Search: UK PMC or PubMed

Release Version: PomBase:18_35 - 11 May 2013