pob3 (SPBC609.05)


Gene Standard Namepob3 Characterisation Statuspublished
Systematic IDSPBC609.05 Feature Typeprotein coding
Synonyms Name Description
ProductFACT complex subunit Pob3 Product Size512aa, 57.46 kDa
Genomic Location Chromosome II, 3169409-3171345 (1937nt); CDS:3169409-3171006 (1598nt)

Ensembl Gene Location
GO Molecular Function
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0003677DNA bindingIEAIPR000969GO_REF:0000002385
GO:0005515protein bindingIPIspt16PMID:17614284861
GO Biological Process
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0034613cellular protein localization552
localizes swi6IMPPMID:17614284
GO:0006974cellular response to DNA damage stimulusIEAUniProtKB-KW:KW-0227GO_REF:0000037235
GO:0030702chromatin silencing at centromereIMPPMID:1761428453
GO:0030466chromatin silencing at silent mating-type cassetteIMPPMID:1761428432
GO:0043486histone exchangeICGO:0035101GO_REF:000000121
GO:0000070mitotic sister chromatid segregationIMPPMID:17614284132
GO:0006334nucleosome assemblyISOSGD:S000004534GO_REF:000002429
GO:0045899positive regulation of RNA polymerase II transcriptional preinitiation complex assemblyISOSGD:S000004534GO_REF:00000241
GO Cellular Component
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0035101FACT complexIDAPMID:176142842
GO:0005829cytosolIDAPMID:168233722316
GO:0000790nuclear chromatinISSUniProtKB:Q04636GO_REF:0000001279
GO:0043596nuclear replication forkISSUniProtKB:Q04636GO_REF:000000164
GO:0005634nucleusIDAPMID:176142842740
IDAPMID:16823372
Fission Yeast Phenotype Ontology

Population Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0000096sensitive to cadmium246
expressivity FYPO_EXT:0000002Cell growth assaypob3ΔNullPECO:0000102, PECO:0000005, PECO:0000137PMID:18684775
FYPO:0002060viable vegetative cell populationMicroscopynot recorded (unrecorded)PMID:176142843730
Microscopypob3ΔNullPMID:20473289
Microscopypob3ΔNullPECO:0000005, PECO:0000137PMID:23697806

Cell Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0000164abnormal cytokinetic cell separationMicroscopypob3ΔNullPMID:2369780642
FYPO:0001510viable vegetative cell, abnormal cell shape, normal cell size215
expressivity FYPO_EXT:0000003
penetrance FYPO_EXT:0000001
Microscopypob3ΔNullPECO:0000137, PECO:0000005PMID:23697806
Transcript
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
131694093169645
231697053171345

UTRs

Region Coordinates Reference
three_prime_UTR3171007..3171345PMID:20118936
three_prime_UTR3171007..3171345PMID:18641648
Protein Features

Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID Database InterPro Description Start End Count
PF08512 Pfam IPR013719 Domain of unknown function DUF1747 354 445 3
PF03531 Pfam IPR024954 SSRP1 domain 74 300 1
PTHR13711:SF138 HMMPANTHER 19 512 1
PTHR13711 HMMPANTHER 19 512 4
2.30.29.30 Gene3D IPR011993 Pleckstrin homology-like domain 4 106 38
SSF50729 SuperFamily 209 445 36
PR00887 PRINTS IPR000969 Structure-specific recognition protein 405 421 1
PR00887 PRINTS IPR000969 Structure-specific recognition protein 269 285 1
PR00887 PRINTS IPR000969 Structure-specific recognition protein 334 347 1
PR00887 PRINTS IPR000969 Structure-specific recognition protein 379 396 1
PR00887 PRINTS IPR000969 Structure-specific recognition protein 224 240 1
PR00887 PRINTS IPR000969 Structure-specific recognition protein 361 379 1
PR00887 PRINTS IPR000969 Structure-specific recognition protein 246 262 1
PR00887 PRINTS IPR000969 Structure-specific recognition protein 421 439 1

View domain organization at Pfam

Protein Properties

Ave. residue weight 112.22 Da
Charge -42.00
Isoelectric point 4.16
Molecular weight 57.46 kDa
Number of residues 512
Sequence
Gene Expression

Quantitative Gene Expression

Protein Level

Molecules/Cell (average)DuringConditionScaleEvidenceReference
27934during GO:0000080PECO:0000005,
PECO:0000126
mass spectrometry evidencePMID:24763107
29751during GO:0000084PECO:0000005,
PECO:0000126
mass spectrometry evidencePMID:24763107
24062during GO:0000085PECO:0000005,
PECO:0000126
mass spectrometry evidencePMID:24763107
29066during GO:0000087PECO:0000005,
PECO:0000126
mass spectrometry evidencePMID:24763107
16775.15during GO:0072690PECO:0000014,
PECO:0000005
experimental evidencePMID:23101633
30272during GO:0072690PECO:0000005,
PECO:0000126
mass spectrometry evidencePMID:24763107
11153.93during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000014,
PECO:0000127,
PECO:0000005
experimental evidencePMID:23101633

RNA Level

Molecules/Cell (average)DuringConditionScaleEvidenceReference
5.5during GO:0072690PECO:0000014,
PECO:0000005
experimental evidencePMID:23101633
0.79during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000014,
PECO:0000127,
PECO:0000005
experimental evidencePMID:23101633
Miscellaneous Functional Group
DescriptionQualifierReferenceCount
histone chaperone14
Species Distribution
DescriptionQualifierReferenceCount
predominantly single copy (one to one)3080
conserved in fungi4569
conserved in eukaryotes4482
conserved in metazoa3419
conserved in vertebrates3393
conserved in eukaryotes only2487
Orthologs

Manually curated orthologous groups

SpeciesGeneDescriptionLinksCount

Orthologs in Compara


Genetic Interactions

Source: BioGRID

Gene Product Evidence Reference
swr1SNF2 family helicase Swr1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
med20mediator complex subunit Med20 Negative GeneticPMID:18818364
hip1hira protein, histone chaperone Hip1 Negative GeneticPMID:18818364
bdc1bromodomain containing protein 1, Bdc1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
ada1adenosine deaminase Ada1 Positive GeneticPMID:22681890
mms19Dos2 silencing complex subunit Mms19 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
pcf2CAF assembly factor (CAF-1) complex subunit B, Pcf2 Negative GeneticPMID:22681890
SPBC651.04sequence orphan Negative GeneticPMID:22681890
SPAC26H5.04vacuolar import and degradation protein Vid28 (predicted) Negative GeneticPMID:18818364
rad9checkpoint clamp complex protein Rad9 Negative GeneticPMID:18818364
msy2MS ion channel protein 2 (predicted) Positive GeneticPMID:22681890
mug123meiotically upregulated gene Mug123 Negative GeneticPMID:22681890
SPBC354.09cTre1 family protein, involved in vacuolar protein degradation (predicted) Positive GeneticPMID:18818364
elp3elongator complex subunit Elp3 (predicted) Negative GeneticPMID:18818364
dbr1RNA lariat debranching enzyme Dbr1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
pmk1MAP kinase Pmk1 Negative GeneticPMID:18818364
red1RNA elimination defective protein Red1 Negative GeneticPMID:22681890
csk1cyclin-dependent kinase activating kinase Csk1 Negative GeneticPMID:22681890
atg1801WD repeat protein involved in autophagy Atg18a Positive GeneticPMID:18818364
gyp1GTPase activating protein Gyp1 (predicted) Negative GeneticPMID:22681890
asl1cell wall protein Asl1, predicted O-glucosyl hydrolase Positive GeneticPMID:22681890
cay1cactin, spliceosome complex subunit (predicted) Negative GeneticPMID:18818364
rad1checkpoint clamp complex protein Rad1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
dbl5ubiquitin-protein ligase E3 Dbl5 Negative GeneticPMID:18818364
tma23ribosome biogenesis protein Tma23 (predicted) Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
SPCC306.11sequence orphan Negative GeneticPMID:22681890
dnm1dynamin Dnm1 Negative GeneticPMID:18818364
mcl1DNA polymerase alpha accessory factor Mcl1 Negative GeneticPMID:18818364
rad17RFC related checkpoint protein Rad17 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
swc5Swr1 complex subunit Swc5 Negative GeneticPMID:18818364
atg22vacuolar amino acid efflux transporter Atg22 Negative GeneticPMID:22681890
ccr4CCR4-Not complex subunit Ccr4 (predicted) Negative GeneticPMID:18818364
mei4meiotic forkhead transcription factor Mei4 Positive GeneticPMID:18818364
SPAC4A8.06cesterase/lipase (predicted) Negative GeneticPMID:22681890
swc2Swr1 complex complex subunit Swc2 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
vht1vitamin H transporter Vht1 Negative GeneticPMID:22681890
csn1COP9/signalosome complex subunit Csn1 Negative GeneticPMID:18818364
hip4histone promoter control protein Hip4 Phenotypic EnhancementPMID:19547744
SPAC23C4.09cDNA-binding TFAR19-related protein (predicted) Negative GeneticPMID:22681890
ers1RNA-silencing factor Ers1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
ies2Ino80 complex subunit Ies2 Negative GeneticPMID:18818364
nse6Smc5-6 complex non-SMC subunit Nse6 Negative GeneticPMID:22681890
SPCC1840.09NAD dependent epimerase/dehydratase family protein Negative GeneticPMID:22681890
pcf3CAF assembly factor (CAF-1) complex subunit C, Pcf3 Negative GeneticPMID:18818364
rrg9mitochondrial genome maintenance protein Rrg9 (predicted) Negative GeneticPMID:22681890
fkbp39FKBP-type peptidyl-prolyl cis-trans isomerase (predicted) Negative GeneticPMID:18818364
mug28RNA-binding protein Mug28 Positive GeneticPMID:18818364
tpp1trehalose-6-phosphate phosphatase Tpp1 Negative GeneticPMID:22681890
nap1nucleosome assembly protein Nap1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
fsv1SNARE Fsv1 Negative GeneticPMID:22681890
hus1checkpoint clamp complex protein Hus1 Negative GeneticPMID:22681890
clr3histone deacetylase (class II) Clr3 Negative GeneticPMID:18818364
alp14TOG ortholog Alp14 Negative GeneticPMID:18818364
gcd10tRNA (m1A) methyltransferase Gcd10 (predicted) Negative GeneticPMID:22681890
rad51RecA family recombinase Rad51/Rhp51 Negative GeneticPMID:18818364
pun1SUR7 family protein Pun1 (predicted) Negative GeneticPMID:22681890
gpa2heterotrimeric G protein alpha-2 subunit Gpa2 Negative GeneticPMID:22681890
git5heterotrimeric G protein beta subunit Git5 Negative GeneticPMID:22681890
SPAC1610.02cmitochondrial ribosomal protein subunit L1 (predicted) Negative GeneticPMID:22681890
tdp1tyrosyl-DNA phosphodiesterase Tdp1 Negative GeneticPMID:18818364
pab2poly(A) binding protein Pab2 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
SPBC3F6.01cserine/threonine protein phosphatase (predicted) Positive GeneticPMID:18818364
dsk1SR protein-specific kinase Dsk1 Positive GeneticPMID:22681890
mis6inner centromere protein, CENP-I ortholog Mis6 Synthetic LethalityPMID:23028377
rps340S ribosomal protein S3 (predicted) Negative GeneticPMID:22681890
SPAC139.01cnuclease, XP-G family (predicted) Positive GeneticPMID:22681890
SPAC30C2.04cofactor for methionyl-and glutamyl-tRNA synthetases (predicted) Positive GeneticPMID:22681890
SPCC1919.05Ski complex TPR repeat subunit Ski3 (predicted) Positive GeneticPMID:22681890
SPAC30C2.07sequence orphan Negative GeneticPMID:22681890
nep2NEDD8 protease Nep2 Positive GeneticPMID:22681890
SPAC227.06Rab GTPase binding (predicted) Positive GeneticPMID:22681890
SPBC56F2.08cRNA-binding protein (predicted) Negative GeneticPMID:22681890
hob3BAR adaptor protein Hob3 Positive GeneticPMID:22681890
ckb2CK2 family regulatory subunit (predicted) Negative GeneticPMID:18818364
moe1translation initiation factor eIF3d Moe1 Negative GeneticPMID:22681890
rad26ATRIP, ATR checkpoint kinase regulatory subunit Rad26 Negative GeneticPMID:18818364
SPAC8C9.04sequence orphan Positive GeneticPMID:22681890
tma20RNA-binding protein Tma20 (predicted) Positive GeneticPMID:22681890
SPBC106.13ubiquitin ligase complex subunit, involved in proteasome-dependent catabolite inactivation of FBPase (predicted) Negative GeneticPMID:22681890
sec72Sec7 domain protein, ARF GEF Sec72 Positive GeneticPMID:22681890
mug80cyclin Clg1 (predicted) Negative GeneticPMID:22681890
asp1inositol hexakisphosphate kinase/inositol pyrophosphate synthase (predicted) Negative GeneticPMID:22681890
btb2BTB/POZ domain protein Btb2 Negative GeneticPMID:22681890
SPBC31F10.10czf-MYND type zinc finger protein Negative GeneticPMID:18818364
not3CCR4-Not complex subunit Not3/5 (predicted) Negative GeneticPMID:18818364
dcc1Ctf18 RFC-like complex subunit Dcc1 Negative GeneticPMID:22681890
SPBC16C6.03cribosome assembly protein (predicted) Negative GeneticPMID:22681890
imp1importin alpha Negative GeneticPMID:22681890
fft3SMARCAD1 family ATP-dependent DNA helicase Fft3 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
bdf2BET family double bromodomain protein Bdf2 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
rud3Golgi matrix protein Rud3 (predicted) Negative GeneticPMID:22681890
mak10NatC N-acetyltransferase complex subunit Mak10 (predicted) Negative GeneticPMID:22681890
SPAC10F6.08cHMG box protein Negative GeneticPMID:22681890
pht1histone H2A variant H2A.Z, Pht1 Negative GeneticPMID:22681890
SPAC1805.14sequence orphan Positive GeneticPMID:22681890
hrp3ATP-dependent DNA helicase Hrp3 Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
tsc1hamartin Negative GeneticPMID:22681890
ptf2Mst2 histone acetytransferase acytyltransferase complex subunit Negative GeneticPMID:22681890
ser2phosphoserine phosphatase Ser2 (predicted) Negative GeneticPMID:18818364
SPAC17H9.13cglutamate 5-kinase (predicted) Negative GeneticPMID:22681890
mis18kinetochore protein Mis18 Synthetic LethalityPMID:23028377
SPAC12G12.07cconserved fungal protein Negative GeneticPMID:22681890
arp6actin-like protein Arp6 Negative GeneticPMID:18818364
SPCC594.06cvacuolar SNARE Vam7 (predicted) Negative GeneticPMID:22681890
lag1sphingosine N-acyltransferase Lag1 Positive GeneticPMID:22681890
SPAC13G6.09SSU-rRNA maturation protein Tsr4 homolog 2 (predicted) Negative GeneticPMID:22681890
rdp1RNA-directed RNA polymerase Rdp1 Negative GeneticPMID:18818364
SPAC1A6.01chuman thyroid receptor interacting protein homolog, transcription coactivator (predicted) Negative GeneticPMID:22681890
mst2histone acetyltransferase Mst2 Negative GeneticPMID:22681890
rnc1RNA-binding protein that suppresses calcineurin deletion Rnc1 Negative GeneticPMID:22681890
SPAC977.17MIP water channel (predicted) Positive GeneticPMID:22681890
bdf1Swr1 complex bromodomain subunit Brf1 Negative GeneticPMID:18818364
caf4CCR4-Not complex subunit Caf4/Mdv1 (predicted) Positive GeneticPMID:18818364
SPAC222.08cglutamine aminotransferase subunit (predicted) Negative GeneticPMID:22681890
tef101translation elongation factor EF-1 alpha Ef1a-a Positive GeneticPMID:22681890
hta1histone H2A alpha Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
tif452translation initiation factor eIF4E, 4F complex E subunit isoform 2, stress response factor Negative GeneticPMID:22681890
trm8tRNA (guanine-N7-)-methyltransferase catalytic subunit Trm8 (predicted) Negative GeneticPMID:22681890
snz1pyridoxine biosynthesis protein Negative GeneticPMID:22681890
mug33Tea1-interacting protein involved in exocytosis Positive GeneticPMID:22681890
SPCC594.04csteroid oxidoreductase superfamily protein (predicted) Negative GeneticPMID:22681890
amt1ammonium transporter Amt1 Positive GeneticPMID:22681890
nup132nucleoporin Nup132 Negative GeneticPMID:22681890
rpa12DNA-directed RNA polymerase complex I subunit Rpa12 Negative GeneticPMID:18818364
png2ING family homolog Png2 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
pek1MAP kinase kinase Pek1 Negative GeneticPMID:22681890
cho1phosphatidyl-N-methylethanolamine N-methyltransferase (predicted) Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
SPBC839.03cneddylation protein Dcn1 (predicted) Negative GeneticPMID:22681890
pmt3SUMO Negative GeneticPMID:22681890
SPAC824.04WD repeat protein (predicted) Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
seh1Seh1-associated complex subunity Seh1 Negative GeneticPMID:22681890
rdh54ATP-dependent DNA helicase Rdh54 Negative GeneticPMID:18818364
mhf2FANCM-MHF complex subunit Mhf2 Negative GeneticPMID:22681890
spe1ornithine decarboxylase Spe1 (predicted) Negative GeneticPMID:22681890
rlp1RecA family ATPase Rlp1 Positive GeneticPMID:22681890
SPAC9G1.05actin cortical patch component Aip1 (predicted) Negative GeneticPMID:22681890
SPAC12B10.01cHECT-type ubiquitin-protein ligase E3 (predicted) Positive GeneticPMID:18818364
epe1Jmjc domain chromatin associated protein Epe1 Positive GeneticPMID:18818364
not2CCR4-Not complex subunit Not2 (predicted) Negative GeneticPMID:18818364
SPAC1071.09cDNAJ domain protein, DNAJC9 family (predicted) Negative GeneticPMID:22681890
crb2DNA repair protein Rad9 homolog, Rhp9 Negative GeneticPMID:22681890
fin1serine/threonine protein kinase, NIMA related Fin1 Negative GeneticPMID:18818364
SPCC18.10pyridoxine-pyridoxal-pyridoxamine kinase (predicted) Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
twf1twinfilin (predicted) Negative GeneticPMID:22681890
cip2RNA-binding protein Cip2 Negative GeneticPMID:22681890
pmc2mediator complex subunit Pmc2/Med1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
mug20sequence orphan Positive GeneticPMID:22681890
snt2Lid2 complex subunit Snt2 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
arp42SWI/SNF and RSC complex subunit Arp42 Negative GeneticPMID:18818364
eca39branched chain amino acid aminotransferase Eca39 Negative GeneticPMID:22681890
chp1chromodomain protein Chp1 Negative GeneticPMID:18818364
ash2Ash2-trithorax family protein Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
eme1Holliday junction resolvase subunit Eme1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
rhn1RNA polymerase II transcription termination factor homolog Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
air1zinc knuckle TRAMP complex subunit Air1 Negative GeneticPMID:18818364
mcs2TFIIH complex cyclin Mcs2 Negative GeneticPMID:22681890
mrc1mediator of replication checkpoint 1 Negative GeneticPMID:18818364
pso2DNA 5' exonuclease (predicted) Positive GeneticPMID:22681890
mus7DNA repair protein Mus7/Mms22 Negative GeneticPMID:22681890
ubc16ubiquitin conjugating enzyme Ubc16 (predicted) Negative GeneticPMID:22681890
vps71Swr1 complex subunit Vps71 Negative GeneticPMID:18818364
cpd1tRNA (m1A) methyltransferase complex catalytic subunit Cpd1 Negative GeneticPMID:18818364
SPAC19B12.11czinc finger protein, human ZNF593 ortholog Negative GeneticPMID:18818364
ulp2SUMO deconjugating cysteine peptidase Ulp2 (predicted) Negative GeneticPMID:22681890
swc3Swr1 complex subunit Swc3 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
ell1RNA polymerase II transcription elongation factor SpELL Positive GeneticPMID:22681890
scs7sphingosine hydroxylase Scs7 Positive GeneticPMID:22681890
shk2PAK-related kinase Shk2 Negative GeneticPMID:18818364
nup37WD repeat protein, nucleoporin Nup37 Positive GeneticPMID:18818364
akr1palmitoyltransferase Akr1 (predicted) Negative GeneticPMID:22681890
tco89TORC1 subunit Tco89 Negative GeneticPMID:22681890
hos2histone deacetylase (class I) Hos2 Negative GeneticPMID:18818364
set3histone lysine methyltransferase Set3 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
SPAC13G7.11mitochondrial respiratory complex assembly protein (predicted) Negative GeneticPMID:22681890
SPCC70.10sequence orphan Negative GeneticPMID:22681890
pmc5mediator complex subunit Pmc5 Negative GeneticPMID:18818364
dcr1dicer Negative GeneticPMID:18818364
SPAC1071.03csequence orphan Negative GeneticPMID:22681890
SPCC24B10.18human Leydig cell tumor 10 kDa protein homolog Negative GeneticPMID:22681890
SPBC36B7.08cnucleosome assembly protein (predicted) Negative GeneticPMID:18818364
hat1histone acetyltransferase Hat1 Negative GeneticPMID:22681890
kap114karyopherin Kap14 Negative GeneticPMID:18818364
tcg1single-stranded telomeric binding protein Tgc1 Positive GeneticPMID:22681890
SPBC16C6.05mitochondrial translation initiation factor (predicted) Positive GeneticPMID:18818364
fmd2glutathione-dependent formaldehyde dehydrogenase (predicted) Negative GeneticPMID:22681890
usp103U1 snRNP-associated protein Usp103 Positive GeneticPMID:18818364
erd1Erd1 homolog (predicted) Negative GeneticPMID:22681890
rcd1RNA-binding protein, CCR4-NOT complex subunit Rcd1 Negative GeneticPMID:22681890
ssb3DNA replication factor A subunit Ssb3 Negative GeneticPMID:22681890
ilv1acetolactate synthase catalytic subunit Negative GeneticPMID:22681890
SPBC9B6.11cCCR4/nocturin family endoribonuclease (predicted) Positive GeneticPMID:22681890
SPAC1B3.02ctranscription elongation factor, Elf1 family (predicted) Negative GeneticPMID:22681890
SPBC16H5.13WD repeat protein, human WDR7 ortholog Negative GeneticPMID:18818364
SPBC947.06cspermidine family transporter (predicted) Negative GeneticPMID:22681890
ask1DASH complex subunit Ask1 Negative GeneticPMID:18818364
hrq1RecQ type DNA helicase Hrq1 (predicted) Negative GeneticPMID:22681890
trm112protein and tRNA methyltransferase regulatory subunit Trm112 (predicted) Negative GeneticPMID:22681890
rad3ATR checkpoint kinase Rad3 Phenotypic EnhancementPMID:19547744
alm1medial ring protein Alm1 Negative GeneticPMID:22681890
mto1MT organizer Mto1 Negative GeneticPMID:22681890
SPAC12G12.11cDUF544 family protein Negative GeneticPMID:22681890
mug154conserved fungal protein Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
klp6kinesin-like protein Klp6 Negative GeneticPMID:18818364
SPAC24B11.08cCOPII-coated vesicle component Erv46 (predicted) Positive GeneticPMID:22681890
ist1MVB sorting pathway protein (predicted) Negative GeneticPMID:22681890
cnp1centromere-specific histone H3 CENP-A Dosage LethalityPMID:23028377
lsb5cortical component Lsb5 (predicted) Negative GeneticPMID:18818364
msc1multi-copy suppressor of Chk1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
rsc4RSC complex subunit Rsc4 Negative GeneticPMID:22681890
met16phosphoadenosine phosphosulfate reductase Negative GeneticPMID:22681890
mms1E3 ubiquitin ligase complex subunit Mms1 (predicted) Negative GeneticPMID:22681890
sdc1Dpy-30 domain protein Sdc1 Negative GeneticPMID:18818364
SPCC16C4.20cHMG box protein (predicted) Negative GeneticPMID:22681890
arp8actin-like protein, Ino80 complex subunit Arp8 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
SPCC18B5.05cphosphomethylpyrimidine kinase (predicted) Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
res2MBF transcription factor complex subunit Res2 Negative GeneticPMID:18818364
mre11Mre11 nuclease Negative GeneticPMID:18818364
rpl210260S ribosomal protein L21 (predicted) Negative GeneticPMID:22681890
psh3ER chaperone SHR3 homologue Psh3 Negative GeneticPMID:22681890
SPCC18.13tRNA (guanine-N7-)-methyltransferase subunit Trm82 (predicted) Negative GeneticPMID:22681890
mug70conserved protein Mug20 Negative GeneticPMID:22681890
ura5orotate phosphoribosyltransferase Ura5 Negative GeneticPMID:18818364
ssu72phosphoric ester hydrolase Ssu72 (predicted) Negative GeneticPMID:18818364
sat1Golgi membrane exchange factor subunit Sat1 (predicted) Negative GeneticPMID:18818364
pcf1CAF assembly factor (CAF-1) complex large subunit Pcf1 Phenotypic EnhancementPMID:19547744
ies4Ino80 complex subunit Ies4 Negative GeneticPMID:22681890
mlo2ubiquitin protein ligase E3 component human N-recognin 7 homolog Mlo2 Negative GeneticPMID:22681890
alg6glucosyltransferase Alg6 Negative GeneticPMID:22681890
SPAC10F6.13caspartate aminotransferase (predicted) Negative GeneticPMID:22681890
SPBPB2B2.09c2-dehydropantoate 2-reductase (predicted) Positive GeneticPMID:22681890
Physical Interactions

Source: BioGRID

Gene Product Evidence Reference
cbf11CBF1/Su(H)/LAG-1 family transcription factor Cbf11 Affinity Capture-MSPMID:22540037
External References
Database Identifier Description
NBRP SPBC609.05 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC609.05 Retrieval of eukaryotic orthologs (Bähler Lab)
BioGrid SPBC609.05 BioGRID Interaction Datasets
Expression Viewer SPBC609.05 Cell Cycle Expression Profile (Bähler Lab)
Expression Viewer SPBC609.05 Meiosis/Sporulation Expression Profies (Bähler Lab)
Expression Viewer SPBC609.05 Pheromone response/mating expression profiles (Bähler Lab)
Expression Viewer SPBC609.05 Environmental stress expression profiles (Bähler Lab)
Pomb(A) SPBC609.05 Polyadenylation Viewer (Gullerova lab)
pombeTV SPBC609.05 Transcriptome Viewer (Bähler Lab)
Cyclebase SPBC609.05 Cell Cycle Data
GEO SPBC609.05 GEO profiles
PInt SPBC609.05 Protein-Protein Interaction Predictor (Bähler Lab)
PeptideAtlas SPBC609.05 Peptides identified in tandem mass spectrometry proteomics experiments
WikiGene2541088FACT complex component Pob3
EntrezGene2541088FACT complex component Pob3
SPD / RIKEN25/25F06Orfeome Localization Data
UniProtKB/SwissProtO94529FACT complex subunit pob3
ModBaseO94529Database of comparative protein structure models
STRINGO94529Network display of known and predicted interactions and functional associations
RefSeq PeptideNP_596315FACT complex component Pob3
RefSeq mRNANM_001022237972h- FACT complex component Pob3 (pob3), mRNA
European Nucleotide ArchiveCAA22834ENA Protein Mapping
European Nucleotide ArchiveCAA22834.1ENA Protein Mapping
ReactomeREACT_215564
UniParcUPI000006C66FUniProt Archive

Literature for pob3

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Release Version: PomBase:22_45 - 08 Aug 2014