SPBC725.04

Synonyms ChromosomeII
Productoxalyl-CoA decarboxylase (predicted) Gene Start1208655
Feature Typeprotein coding Gene End1210856
Name Description CDS Start1208965
Characterisation Statusconserved_unknown CDS End1210722

Ensembl Gene Location
SPBC725.01 SPNCRNA.1420 mpr1 SPBC725.03 > SPBC725.04 < SPBC725.05c SPNCRNA.1421 ppk31 pex5
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
112086551210626
212106781210856

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF00205 Pfam Thiamine pyrophosphate enzyme, central domain 192 320 114 6
PF02776 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain 5 170 150.5 6
PF02775 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP-binding 401 544 82 6
52467 Superfamily 184 379 136.8 11
52518 Superfamily 1 185 152.3 12
52518 Superfamily 360 563 123.6 12

Protein Properties

Ave. residue weight 109.04 Da
Charge 7.00
Isoelectric point 8.13
Molecular weight 61.94 kDa
Number of residues 568
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005737cytoplasmISS SGD:S000000746GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005737
GO:0005829cytosolIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005829

Molecular Function
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0000287magnesium ion bindingIEAGO_REF:0000002Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0000287
GO:0030976thiamine pyrophosphate bindingIEAGO_REF:0000002Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0030976

Species Distribution

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DescriptionSourceAll Genes
conserved in BacteriaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000086
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095

Manually Curated Orthologs

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SpeciesGeneDescription

Interactions

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Genetic Interactions from BioGRID

Gene Feature Evidence Source
dsc1ubiquitin-protein ligase E3 (predicted) Negative Genetic


External References

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Database Identifier Description
NBRP SPBC725.04 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC725.04 Retrieval of eukaryotic orthologs
BioGrid SPBC725.04 BioGRID Interaction Datasets
Bähler Lab SPBC725.04 Cell Cycle Expression Profile
Bähler Lab SPBC725.04 Meiosis/Sporulation Expression Profies
Bähler Lab SPBC725.04 Pheromone response/mating expression profiles
Bähler Lab SPBC725.04 Environmental stress expression profiles
Bähler Lab SPBC725.04 Bähler Lab Transcriptome Viewer
Cyclebase SPBC725.04 Cell Cycle Data
Entrez Gene SPBC725.04 Link to Entrez Gene
SPD / RIKEN36/36B05Orfeome Localization Data
UniProtKB/SwissProtQ9Y7M1Putative 2-hydroxyacyl-CoA lyase
ArrayExpressQ9Y7M1Link to ArrayExpress
RefSeq PeptideNP_595484oxalyl-CoA decarboxylase (predicted)
RefSeq mRNANM_001021395972h- oxalyl-CoA decarboxylase (predicted) (SPBC725.04), mRNA
European Nucleotide ArchiveCU329671ENA EMBL mapping
European Nucleotide ArchiveCAA22176ENA Protein Mapping
UniParcUPI000006A40FUniProt Archive

Literature for SPBC725.04

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Search: UK PMC or PubMed