whi5 (SPBC800.02)

Synonymsmug54 ChromosomeII
Productcell cycle transcriptional repressor Whi5 (predicted) Gene Start253148
Feature Typeprotein coding Gene End253984
Name DescriptionWHIskey CDS Start253148
Characterisation Statusbiological_role_inferred CDS End253984

Ensembl Gene Location
pep12 gle1 bms1 > whi5 < SPNCRNA.1331 clr3 SPBTRNAGLN.01 SPBTRNAGLN.02 SPBTRNAGLN.03 rpl4301 atb2
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
1253148253231
2253310253984

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF08528 Pfam Transcription factor Nrm1/Whi5 46 70 40.2 2


Protein Modifications

Term IDDescriptionSourceAll Genes
MOD:00696phosphorylated residue
Temporary processing gif - replaced by AJAX with count of genes annotated with the term MOD:00696

Protein Properties

Ave. residue weight 112.81 Da
Charge 16.00
Isoelectric point 10.22
Molecular weight 28.43 kDa
Number of residues 252
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Biological Process
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0000083regulation of transcription involved in G1/S phase of mitotic cell cycleISS SGD:S000005609GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0000083
GO:0006357regulation of transcription from RNA polymerase II promoterISS SGD:S000005609GO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0006357
GO:0007165signal transductionISS SGD:S000005609GO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0007165
GO:0007346regulation of mitotic cell cycleISS SGD:S000005609GO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0007346
GO:0008361regulation of cell sizeISS SGD:S000005609GO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0008361

Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusISS SGD:S000005609GO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634
IDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year reference
GO:0005737cytoplasmISS SGD:S000005609GO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005737
GO:0005829cytosolIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005829

Molecular Function
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0001078RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcriptionISS SGD:S000005609GO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0001078

Gene Expression

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DescriptionSourceAll Genes
expressed during meiosis Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000123

Warning

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DescriptionSourceAll Genes
gene structure updated Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000070

Species Distribution

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DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094

Manually Curated Orthologs

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SpeciesGeneDescription


External References

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Database Identifier Description
NBRP SPBC800.02 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC800.02 Retrieval of eukaryotic orthologs
BioGrid SPBC800.02 BioGRID Interaction Datasets
Bähler Lab SPBC800.02 Cell Cycle Expression Profile
Bähler Lab SPBC800.02 Meiosis/Sporulation Expression Profies
Bähler Lab SPBC800.02 Pheromone response/mating expression profiles
Bähler Lab SPBC800.02 Environmental stress expression profiles
Bähler Lab SPBC800.02 Bähler Lab Transcriptome Viewer
Cyclebase SPBC800.02 Cell Cycle Data
Entrez Gene SPBC800.02 Link to Entrez Gene
SPD / RIKEN10/10H07Orfeome Localization Data
UniProtKB/SwissProtQ9HGL9Cell cycle transcriptional repressor whi5
ArrayExpressQ9HGL9Link to ArrayExpress
RefSeq PeptideNP_595103cell cycle transcriptional repressor Whi5
RefSeq mRNANM_001021010972h- cell cycle transcriptional repressor Whi5 (whi5), mRNA
European Nucleotide ArchiveCU329671ENA EMBL mapping
European Nucleotide ArchiveCAC01517ENA Protein Mapping
UniParcUPI000006BE20UniProt Archive

Literature for whi5

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Search: UK PMC or PubMed