SPBC83.09c

Synonyms ChromosomeII
ProductGYF domain protein Gene Start1527155
Feature Typeprotein coding Gene End1525577
Name Description CDS Start1526965
Characterisation Statusconserved_unknown CDS End1525693

Ensembl Gene Location
SPBC83.05 SPBC83.06c jmj3 rvb2 > SPBC83.09c < SPNCRNA.1439 SPBC83.10 SPBC83.11 SPBC83.12 SPNCRNA.1440 SPBC83.13
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
115271551526848
215268011525577

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF02213 Pfam GYF 345 401 32.3 2
55277 Superfamily 344 405 38.6 2
SM00444 Smart GYF 343 401 88 2
PS50829 PROSITE GYF 344 402 12.206 2


Protein Modifications

Term IDDescriptionSourceAll Genes
MOD:00696phosphorylated residueTemporary processing gif - replaced by AJAX with count of genes annotated with the term MOD:00696

Protein Properties

Ave. residue weight 116.15 Da
Charge -24.50
Isoelectric point 4.47
Molecular weight 47.39 kDa
Number of residues 408
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0000790nuclear chromatinISS SGD:S000001199GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0000790
GO:0005634nucleusISS SGD:S000001199GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634
IDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year reference
GO:0005682U5 snRNPISS SGD:S000001199GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005682

Species Distribution

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DescriptionSourceAll Genes
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096

Manually Curated Orthologs

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SpeciesGeneDescription


External References

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Database Identifier Description
NBRP SPBC83.09c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC83.09c Retrieval of eukaryotic orthologs
BioGrid SPBC83.09c BioGRID Interaction Datasets
Bähler Lab SPBC83.09c Cell Cycle Expression Profile
Bähler Lab SPBC83.09c Meiosis/Sporulation Expression Profies
Bähler Lab SPBC83.09c Pheromone response/mating expression profiles
Bähler Lab SPBC83.09c Environmental stress expression profiles
Bähler Lab SPBC83.09c Bähler Lab Transcriptome Viewer
Cyclebase SPBC83.09c Cell Cycle Data
Entrez Gene SPBC83.09c Link to Entrez Gene
SPD / RIKEN44/44B05Orfeome Localization Data
UniProtKB/SwissProtO94693LIN1-like protein
ArrayExpressO94693Link to ArrayExpress
RefSeq PeptideNP_595641GYF domain-containing protein
RefSeq mRNANM_001021535972h- GYF domain-containing protein (SPBC83.09c), mRNA
European Nucleotide ArchiveCU329671ENA EMBL mapping
European Nucleotide ArchiveCAB36871ENA Protein Mapping
UniParcUPI000006B9E9UniProt Archive

Literature for SPBC83.09c

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Search: UK PMC or PubMed