sfc9 (SPBC8D2.07c)

SynonymsSPBC8D2.08c ChromosomeII
Producttranscription factor TFIIIC complex subunit Sfc9 (predicted) Gene Start1375055
Feature Typeprotein coding Gene End1372488
Name Description CDS Start1374935
Characterisation Statusbiological_role_inferred CDS End1372610

Ensembl Gene Location
sfi1 irs1 > sfc9 < msl1 rmt3 SPBC8D2.11 new15 SPBC8D2.12c
Transcript
Contact Curators | Back to Top
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
113750551374828
213747801374684
313746251374538
413743381372488

Protein Feature Information
Contact Curators | Back to Top

Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF12657 Pfam Transcription factor IIIC, 90kDa subunit, N-terminal 2 175 287 1
PF12660 Pfam Transcription factor IIIC, putative zinc-finger 585 670 83.9 1

Protein Properties

Ave. residue weight 111.24 Da
Charge -7.00
Isoelectric point 5.86
Molecular weight 74.86 kDa
Number of residues 673
Sequence
Contact Curators | Back to Top

Fission Yeast Phenotype

 Contact Curators | Back to Top
Term IDDescriptionSourceAll Genes
FYPO:0000049inviableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000049

Gene Ontology Annotations

 Contact Curators | Back to Top
Biological Process
Contact Curators | Back to Top
GO IDTermEvidenceWith/FromSourceAll Genes
GO:0006383transcription from RNA polymerase III promoterISS UniProtKB:Q9UKN8GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0006383

Cellular Component
Contact Curators | Back to Top
GO IDTermEvidenceWith/FromSourceAll Genes
GO:0000127transcription factor TFIIIC complexISS UniProtKB:Q9UKN8GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0000127
TASGO_REF:unpublished
GO:0005634nucleusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634
GO:0005829cytosolIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005829

Warning

 Contact Curators | Back to Top
DescriptionSourceAll Genes
gene structure updatedTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000070

Protein Family

 Contact Curators | Back to Top
DescriptionSourceAll Genes
zinc finger proteinTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000137

Species Distribution

 Contact Curators | Back to Top
DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
no apparent S. cerevisiae orthologTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000055
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094

Manually Curated Orthologs

 Contact Curators | Back to Top
SpeciesGeneDescription


External References

 Contact Curators | Back to Top
Database Identifier Description
NBRP SPBC8D2.07c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBC8D2.07c Retrieval of eukaryotic orthologs
BioGrid SPBC8D2.07c BioGRID Interaction Datasets
Bähler Lab SPBC8D2.07c Cell Cycle Expression Profile
Bähler Lab SPBC8D2.07c Meiosis/Sporulation Expression Profies
Bähler Lab SPBC8D2.07c Pheromone response/mating expression profiles
Bähler Lab SPBC8D2.07c Environmental stress expression profiles
Bähler Lab SPBC8D2.07c Bähler Lab Transcriptome Viewer
Cyclebase SPBC8D2.07c Cell Cycle Data
Entrez Gene SPBC8D2.07c Link to Entrez Gene
SPD / RIKEN39/39F11Orfeome Localization Data
UniProtKB/SwissProtO13650Putative transcription factor tau subunit sfc9
ArrayExpressO13650Link to ArrayExpress
RefSeq PeptideNP_595570transcription factor TFIIIC complex subunit Sfc9 (predicted)
RefSeq mRNANM_001021465972h- transcription factor TFIIIC complex subunit Sfc9 (predicted) (sfc9), mRNA
European Nucleotide ArchiveAB004538ENA EMBL mapping
European Nucleotide ArchiveCU329671ENA EMBL mapping
European Nucleotide ArchiveBAA21438ENA Protein Mapping
European Nucleotide ArchiveCAA17822ENA Protein Mapping
UniParcUPI000006C6CAUniProt Archive

Literature for sfc9

 Contact Curators | Back to Top
Search: UK PMC or PubMed