SPBP19A11.07c

Synonyms SPBP4H10.02c, SPBC1346.03 ChromosomeII
Producthuman C17orf28 ortholog 2 Gene Start2871156
Feature Typeprotein coding Gene End2868413
Name Description CDS Start2870871
Characterisation Statusconserved_unknown CDS End2868453

Ensembl Gene Location
mrp7 SPNCRNA.1555 SPNCRNA.1556 lid2 SPNCRNA.1557 > SPBP19A11.07c < oxa102 ppb1 spe2
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
128711562870852
228707992870733
328706952870244
428701932870072
528700292869941
628698882869286
728692502869031
828689862868820
928687792868413

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF12722 Pfam 1 559 139.3 3

Protein Properties

Ave. residue weight 115.64 Da
Charge -0.50
Isoelectric point 6.46
Molecular weight 79.56 kDa
Number of residues 688
Sequence
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Gene Ontology Annotations

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Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634
GO:0005829cytosolIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005829

Disease Association

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DescriptionSourceAll Genes
cancerTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000239

Warning

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DescriptionSourceAll Genes
gene structure updated Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000070

Species Distribution

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DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094

Manually Curated Orthologs

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SpeciesGeneDescription


External References

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Database Identifier Description
NBRP SPBP19A11.07c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBP19A11.07c Retrieval of eukaryotic orthologs
BioGrid SPBP19A11.07c BioGRID Interaction Datasets
Bähler Lab SPBP19A11.07c Cell Cycle Expression Profile
Bähler Lab SPBP19A11.07c Meiosis/Sporulation Expression Profies
Bähler Lab SPBP19A11.07c Pheromone response/mating expression profiles
Bähler Lab SPBP19A11.07c Environmental stress expression profiles
Bähler Lab SPBP19A11.07c Bähler Lab Transcriptome Viewer
Cyclebase SPBP19A11.07c Cell Cycle Data
Entrez Gene SPBP19A11.07c Link to Entrez Gene
SPD / RIKEN28/28F11Orfeome Localization Data
UniProtKB/SwissProtQ9HDV3UPF0663 protein P19A11.07c
ArrayExpressQ9HDV3Link to ArrayExpress
RefSeq_mRNA_predictedXM_001713086972h- hypothetical protein (SPBP19A11.07c), mRNA
RefSeq_peptide_predictedXP_001713138hypothetical protein SPBP19A11.07c
European Nucleotide ArchiveCU329671ENA EMBL mapping
European Nucleotide ArchiveCAC19757ENA Protein Mapping
UniParcUPI000228F3D6UniProt Archive

Literature for SPBP19A11.07c

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Search: UK PMC or PubMed