nup131 (SPBP35G2.06c)

SynonymsNup133a ChromosomeII
Productnucleoporin Nup131 Gene Start976901
Feature Typeprotein coding Gene End973022
Name Description CDS Start976632
Characterisation Statuspublished CDS End973049

Ensembl Gene Location
SPBP35G2.02 sgo1 SPBP35G2.04c cki2 > nup131 < ilv1 air1 usp103 mit1 SPNCRNA.1401
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
1976901975172
2975137975044
3975002974617
4974577974223
5974181973022

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF08801 Pfam Nucleoporin, Nup133/Nup155-like, N-terminal 53 454 161.7 3
117289 Superfamily 113 459 62.6 3

Protein Properties

Ave. residue weight 115.10 Da
Charge -22.00
Isoelectric point 5.28
Molecular weight 131.44 kDa
Number of residues 1142
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viable
Temporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Biological Process
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0006913nucleocytoplasmic transportISS SGD:S000001790GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0006913

Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005635nuclear envelopeIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005635
GO:0005643nuclear poreIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005643
GO:0005829cytosolIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005829
GO:0031080Nup107-160 complexIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0031080
GO:0032153cell division siteIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0032153

Molecular Function
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005515protein bindingIPI nup107Temporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005515

Warning

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DescriptionSourceAll Genes
gene structure updated Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000070

Protein Family

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DescriptionSourceAll Genes
WD repeat proteinTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000190

Species Distribution

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DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094

Manually Curated Orthologs

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SpeciesGeneDescription

Interactions

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Genetic Interactions from BioGRID

Gene Feature Evidence Source
hip1hira protein, histone chaperone Hip1 Positive Genetic
ask1DASH complex subunit Ask1 Positive Genetic
amo1nuclear rim protein Amo1 Negative Genetic
pmc5mediator complex subunit Pmc5 Positive Genetic
med20mediator complex subunit Med20 Positive Genetic
rpa12DNA-directed RNA polymerase complex I subunit Rpa12 Positive Genetic
sec28coatomer epsilon subunit (predicted) Positive Genetic
scs7sphingosine hydroxylase Scs7 Positive Genetic

Physical Interactions from BioGRID

Gene Feature Evidence Source
nup107nucleoporin Nup107 Affinity Capture-Western

External References

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Database Identifier Description
NBRP SPBP35G2.06c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBP35G2.06c Retrieval of eukaryotic orthologs
BioGrid SPBP35G2.06c BioGRID Interaction Datasets
Bähler Lab SPBP35G2.06c Cell Cycle Expression Profile
Bähler Lab SPBP35G2.06c Meiosis/Sporulation Expression Profies
Bähler Lab SPBP35G2.06c Pheromone response/mating expression profiles
Bähler Lab SPBP35G2.06c Environmental stress expression profiles
Bähler Lab SPBP35G2.06c Bähler Lab Transcriptome Viewer
Cyclebase SPBP35G2.06c Cell Cycle Data
Entrez Gene SPBP35G2.06c Link to Entrez Gene
SPD / RIKEN48/48D11Orfeome Localization Data
UniProtKB/SwissProtQ9P797Nucleoporin nup131
ArrayExpressQ9P797Link to ArrayExpress
RefSeq PeptideNP_595381nucleoporin Nup131
RefSeq mRNANM_001021288972h- nucleoporin Nup131 (nup131), mRNA
European Nucleotide ArchiveCU329671ENA EMBL mapping
European Nucleotide ArchiveCAB87368ENA Protein Mapping
UniParcUPI00000696FAUniProt Archive

Literature for nup131

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Search: UK PMC or PubMed