air1 (SPBP35G2.08c)


Gene Standard Nameair1 Characterisation Statuspublished
Systematic IDSPBP35G2.08c Feature Typeprotein coding
Synonyms Name Description
Productzinc knuckle TRAMP complex subunit Air1 Product Size315aa, 35.55 kDa
Genomic Location Chromosome II, 980870-979358 (1513nt); CDS:980580-979529 (1052nt)

Ensembl Gene Location
GO Molecular Function
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0008270zinc ion bindingIEAIPR001878GO_REF:0000002249
GO Biological Process
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0043630ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic processISOSGD:S000001341GO_REF:00000244
GO:0016075rRNA catabolic processISOSGD:S000001341GO_REF:000002416
GO:0016076snRNA catabolic processISOSGD:S000001341GO_REF:00000241
GO:0016077snoRNA catabolic processISOSGD:S000001341GO_REF:00000242
GO:0016078tRNA catabolic processISOSGD:S000001341GO_REF:000002416
GO Cellular Component
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0031499TRAMP complexIDAPMID:175124054
IDAPMID:20403971
GO:0005730nucleolusISOSGD:S000001341GO_REF:0000024343
GO:0005634nucleusISOSGD:S000001341GO_REF:00000242740
Fission Yeast Phenotype Ontology
Gene Deletion Viability: Viable

Population Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0001098sensitive to 4-nitroquinoline N-oxide159
expressivity FYPO_EXT:0000003Cell growth assayair1ΔNullPECO:0000137, PECO:0000005PMID:19264558
FYPO:0002060viable vegetative cell populationMicroscopyair1ΔNullPECO:0000005, PECO:0000137PMID:236978063759
Microscopyair1ΔNullPMID:20473289

Cell Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0002353decreased chromatin silencingTranscript expression level evidenceair1ΔNullPECO:0000137, PECO:0000005PMID:2040397116
FYPO:0002177viable vegetative cell with normal cell morphology3089
penetrance FYPO_EXT:0000001Microscopyair1ΔNullPECO:0000005, PECO:0000137PMID:23697806
Transcript
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
1980870980359
2980309980208
3980152979358

UTRs

Region Coordinates Reference
five_prime_UTR980870..980581PMID:21511999
three_prime_UTR979528..979358PMID:21511999
Protein Features

Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID Database InterPro Description Start End Count
PF00098 Pfam IPR001878 Zinc finger, CCHC-type 90 106 4
SM00343 SMART IPR001878 Zinc finger, CCHC-type 152 168 5
SM00343 SMART IPR001878 Zinc finger, CCHC-type 108 125 5
SM00343 SMART IPR001878 Zinc finger, CCHC-type 90 106 5
SM00343 SMART IPR001878 Zinc finger, CCHC-type 190 206 5
SM00343 SMART IPR001878 Zinc finger, CCHC-type 128 144 5
PS50158 Prosite Profiles IPR001878 Zinc finger, CCHC-type 128 144 7
PS50158 Prosite Profiles IPR001878 Zinc finger, CCHC-type 91 105 7
PTHR23002 HMMPANTHER 1 283 3
PTHR23002:SF9 HMMPANTHER 1 283 1
4.10.60.10 Gene3D IPR001878 Zinc finger, CCHC-type 86 137 5
4.10.60.10 Gene3D IPR001878 Zinc finger, CCHC-type 138 167 5
SSF57756 SuperFamily IPR001878 Zinc finger, CCHC-type 84 125 5
SSF57756 SuperFamily IPR001878 Zinc finger, CCHC-type 127 167 5
PIRSF018162 PIRSF IPR016713 Poly(A) polymerase complex, Air1/2 7 315 1
Coil ncoils Rabaptin coiled-coil domain 232 253 968

View domain organization at Pfam

Manually Curated Family or Sub-families

Term IDTerm NameReferenceCount
PBO:0000137zinc finger proteinTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000137
PBO:0000623zf-CCHC type (zinc knuckle)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000623

Protein Properties

Ave. residue weight 112.84 Da
Charge 9.00
Isoelectric point 7.75
Molecular weight 35.55 kDa
Number of residues 315
Modifications

Protein Modifications

Term IDTerm NameEvidenceResidueReferenceCount
MOD:00046O-phospho-L-serineIDAS22PMID:182575171670
present during cellular response to thiabendazole
present during mitotic M phaseexperimental evidenceS16PMID:21712547
experimental evidenceS16PMID:24763107
present during mitotic M phaseexperimental evidenceS12PMID:21712547
present during cellular response to thiabendazoleIDAS16PMID:18257517
experimental evidenceS12PMID:24763107
MOD:00696phosphorylated residueNASPMID:182575171922
NASPMID:19547744
Sequence
Gene Expression

Quantitative Gene Expression

Protein Level

Molecules/Cell (average)ExtensionConditionScaleEvidenceReference
2564during GO:0072690PECO:0000126,
PECO:0000005
single_cellmass spectrometry evidencePMID:24763107
482.78during GO:0072690PECO:0000005,
PECO:0000014
population_wideexperimental evidencePMID:23101633
NDduring cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127
population_wideexperimental evidencePMID:23101633

RNA Level

Molecules/Cell (average)ExtensionConditionScaleEvidenceReference
2.6during GO:0072690PECO:0000005,
PECO:0000014
population_wideexperimental evidencePMID:23101633
0.49during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127
population_wideexperimental evidencePMID:23101633
Warning
DescriptionQualifierReferenceCount
gene structure updated PMID:21511999432
Species Distribution
DescriptionQualifierReferenceCount
predominantly single copy (one to one)3092
conserved in fungi4600
conserved in eukaryotes4514
conserved in metazoa3425
conserved in vertebrates3400
conserved in eukaryotes only2497
Orthologs

Manually curated orthologous groups

SpeciesGeneDescriptionLinksCount

Orthologs in Compara


Genetic Interactions

Source: BioGRID

Gene Product Evidence Reference
pnk1DNA kinase/phosphatase Pnk1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
yaf9YEATS family histone acetyltransferase subunit Yaf9 Negative GeneticPMID:18818364
tal1transaldolase (predicted) Negative GeneticPMID:22681890
ubc15ubiquitin conjugating enzyme Ubc15 Positive GeneticPMID:18818364
bdc1bromodomain containing protein 1, Bdc1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
SPAC9.07cGTPase Rbg1 (predicted) Negative GeneticPMID:22681890
mga2IPT/TIG ankyrin repeat containing transcription regulator of fatty acid biosynthesis (predicted) Negative GeneticPMID:18818364
SPAC26H5.04vacuolar import and degradation protein Vid28 (predicted) Negative GeneticPMID:18818364
swd1Set1C complex subunit Swd1 Negative GeneticPMID:18818364
mms19Dos2 silencing complex subunit Mms19 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
mpc2mitochondrial pyruvate transmembrane transporter Mpc2 (predicted) Negative GeneticPMID:22681890
snf5SWI/SNF complex subunit Snf5 Negative GeneticPMID:18818364
rad55RecA family ATPase Rad55/Rhp55 Positive GeneticPMID:22681890
sgf73SAGA complex subunit Sgf73 Negative GeneticPMID:22681890
rik1silencing protein Rik1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
ash2Ash2-trithorax family protein Negative GeneticPMID:18818364
git3G-protein coupled receptor Git3 Negative GeneticPMID:22681890
ccr4CCR4-Not complex subunit Ccr4 (predicted) Negative GeneticPMID:18818364
rpb9DNA-directed RNA polymerase II complex subunit Rpb9 Negative GeneticPMID:18818364
SPBC16C6.03cribosome assembly protein (predicted) Negative GeneticPMID:22681890
cay1cactin, spliceosome complex subunit (predicted) Positive GeneticPMID:18818364
csn1COP9/signalosome complex subunit Csn1 Negative GeneticPMID:18818364
asp1inositol hexakisphosphate kinase/inositol pyrophosphate synthase (predicted) Negative GeneticPMID:22681890
bob1prefoldin subunit 5 (predicted) Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
dep1Sds3-like family protein Dep1 Negative GeneticPMID:22681890
fkbp39FKBP-type peptidyl-prolyl cis-trans isomerase (predicted) Positive GeneticPMID:18818364
tpp1trehalose-6-phosphate phosphatase Tpp1 Negative GeneticPMID:22681890
nap1nucleosome assembly protein Nap1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
pom1DYRK family protein kinase Pom1 Negative GeneticPMID:18818364
rsc1RSC complex subunit Rsc1 Negative GeneticPMID:18818364
gcd10tRNA (m1A) methyltransferase Gcd10 (predicted) Positive GeneticPMID:22681890
SPBC106.13ubiquitin ligase complex subunit, involved in proteasome-dependent catabolite inactivation of FBPase (predicted) Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
lub1WD repeat protein Lub1 Negative GeneticPMID:18818364
caf1CCR4-Not complex CAF1 family ribonuclease subunit Caf1 Positive GeneticPMID:18818364
pab2poly(A) binding protein Pab2 Phenotypic SuppressionPMID:22965128
msc1multi-copy suppressor of Chk1 Positive GeneticPMID:18818364
SPBC215.06chuman LYAR homolog Positive GeneticPMID:22681890
arf6ADP-ribosylation factor, Arf family Arf6 Negative GeneticPMID:22681890
SPAC30C2.04cofactor for methionyl-and glutamyl-tRNA synthetases (predicted) Positive GeneticPMID:22681890
SPBC1289.14adducin (predicted) Negative GeneticPMID:22681890
zds1zds family protein phosphatase type A regulator Zds1 (predicted) Negative GeneticPMID:18818364
SPAC227.05prefoldin subunit 4 (predicted) Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
lem2LEM domain protein Heh1/Lem2 Negative GeneticPMID:22681890
raf2Rik1-associated factor Raf2 Negative GeneticPMID:18818364
atp14F1-ATPase subunit H (predicted) Negative GeneticPMID:22681890
moe1translation initiation factor eIF3d Moe1 Negative GeneticPMID:22681890
gmh5alpha-1,2-galactosyltransferase (predicted) Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
gar2nucleolar protein required for rRNA processing Negative GeneticPMID:22681890
dcd1deoxycytidylate deaminase (predicted) Negative GeneticPMID:22681890
tma20RNA-binding protein Tma20 (predicted) Negative GeneticPMID:18818364
pds5mitotic cohesin-associated protein Pds5 Negative GeneticPMID:18818364
elp6elongator complex subunit Elp6 (predicted) Positive GeneticPMID:18818364
vps38phophatidylinositol 3-kinase complex subunit Vps38 Positive GeneticPMID:22681890
cph1Clr6 histone deacetylase associated PHD protein-1 Cph1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
SPBC31F10.10czf-MYND type zinc finger protein Negative GeneticPMID:18818364
sck2serine/threonine protein kinase Sck2 Positive GeneticPMID:24463365
est1telomerase regulator Est1 Negative GeneticPMID:18818364
arg12argininosuccinate synthase Arg12 Negative GeneticPMID:22681890
atp11F1-ATPase chaperone Atp11 (predicted) Negative GeneticPMID:18818364
ubp8SAGA complex ubiquitin C-terminal hydrolase Ubp8 Negative GeneticPMID:22681890
nup124nucleoporin Nup124 Positive GeneticPMID:22681890
mpp6nuclear exosome-associated RNA binding protein Mpp6 Negative GeneticPMID:22681890
pht1histone H2A variant H2A.Z, Pht1 Negative GeneticPMID:18818364
ser2phosphoserine phosphatase Ser2 (predicted) Negative GeneticPMID:18818364
ulp2SUMO deconjugating cysteine peptidase Ulp2 (predicted) Negative GeneticPMID:22681890
ddb1damaged DNA binding protein Ddb1 Negative GeneticPMID:18818364
alp14TOG ortholog Alp14 Negative GeneticPMID:18818364
ubp2ubiquitin C-terminal hydrolase Ubp2 Positive GeneticPMID:18818364
pac10prefoldin subunit 3 Pac10 (predicted) Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
rnc1RNA-binding protein that suppresses calcineurin deletion Rnc1 Negative GeneticPMID:22681890
SPAP8A3.13cVid24 family protein (predicted) Negative GeneticPMID:22681890
SPBC1778.05chuman LAMTOR2 ortholog Negative GeneticPMID:22681890
swi2Swi5 complex subunit Swi2 Negative GeneticPMID:18818364
ase1antiparallel microtubule cross-linking factor Ase1 Negative GeneticPMID:18818364
par1protein phosphatase regulatory subunit Par1 Negative GeneticPMID:18818364
hta1histone H2A alpha Negative GeneticPMID:18818364
set1histone lysine methyltransferase Set1 Negative GeneticPMID:18818364
arp8actin-like protein, Ino80 complex subunit Arp8 Negative GeneticPMID:18818364
clr4histone H3 lysine methyltransferase Clr4 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
SPCC594.04csteroid oxidoreductase superfamily protein (predicted) Negative GeneticPMID:22681890
aut12autophagy associated protein Aut12 (predicted) Positive GeneticPMID:18818364
rpa12DNA-directed RNA polymerase complex I subunit Rpa12 Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
SPAC824.04WD repeat protein (predicted) Positive GeneticPMID:18818364
apq12nuclear membrane organization protein Apq12 (predicted) Negative GeneticPMID:22681890
ubp16ubiquitin C-terminal hydrolase Ubp16 Negative GeneticPMID:22681890
epe1Jmjc domain chromatin associated protein Epe1 Negative GeneticPMID:18818364
not2CCR4-Not complex subunit Not2 (predicted) Positive GeneticPMID:18818364
msn5karyopherin (predicted) Positive GeneticPMID:18818364
mug20Schizosaccharomyces specific protein Mug20 Positive GeneticPMID:22681890
tom70mitochondrial TOM complex subunit Tom70 (predicted) Positive GeneticPMID:22681890
arp42SWI/SNF and RSC complex subunit Arp42 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
rpl280160S ribosomal protein L27/L28 Positive GeneticPMID:22681890
SPBC25H2.15SSU-rRNA maturation protein Tsr4 homolog 1 (predicted) Negative GeneticPMID:22681890
eme1Holliday junction resolvase subunit Eme1 Positive GeneticPMID:18818364
sec28coatomer epsilon subunit (predicted) Positive GeneticPMID:18818364
SPBC365.16conserved protein Negative GeneticPMID:22681890
spf1Set1C PHD Finger protein Spf1 Negative GeneticPMID:18818364
trs130TRAPP complex subunit Trs130 (predicted) Negative GeneticPMID:22681890
spp27RNA polymerase I upstream activation factor complex subunit Spp27 Negative GeneticPMID:22681890
mcs2TFIIH complex cyclin Mcs2 Negative GeneticPMID:22681890
SPAC2G11.10cthiosulfate sulfurtransferase, URM1 activating enzyme (predicted) Negative GeneticPMID:22681890
SPAC3A11.13prefoldin subunit 6 (predicted) Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
SPAC1952.06cspliceosomal complex subunit (predicted) Positive GeneticPMID:18818364
tip1CLIP170 family protein Tip1 Negative GeneticPMID:18818364
swd2Set1C complex subunit Swd2.1 Negative GeneticPMID:18818364
cbp1CENP-B homolog Negative GeneticPMID:18818364
scs7sphingosine hydroxylase Scs7 Negative GeneticPMID:18818364
tco89TORC1 subunit Tco89 Negative GeneticPMID:22681890
hos2histone deacetylase (class I) Hos2 Negative GeneticPMID:18818364
set3histone lysine methyltransferase Set3 Negative GeneticPMID:18818364
ubp3ubiquitin C-terminal hydrolase Ubp3 Negative GeneticPMID:18818364
cwf21complexed with Cdc5 protein Cwf21 Positive GeneticPMID:18818364
vph2endoplasmic reticulum membrane protein involved in assembly of the V-ATPase (predicted) Negative GeneticPMID:18818364
tea2kinesin-like protein Tea2 Negative GeneticPMID:18818364
klp3kinesin-like protein Klp3 Positive GeneticPMID:18818364
alm1medial ring protein Alm1 Negative GeneticPMID:22681890
mug154conserved fungal protein Negative GeneticPMID:22681890
apl5AP-3 adaptor complex subunit Apl5 (predicted) Positive GeneticPMID:22681890
dlc2dynein light chain Dlc2 (predicted) Negative GeneticPMID:18818364
rsv2transcription factor Rsv2 Positive GeneticPMID:18818364
snt2Lid2 complex subunit Snt2 Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
pob3FACT complex subunit Pob3 Negative GeneticPMID:18818364
ubp7ubiquitin C-terminal hydrolase Ubp7 Positive GeneticPMID:18818364
SPAC694.02DEAD/DEAH box helicase Positive GeneticPMID:22681890
utp16U3 snoRNP-associated protein Utp16 (predicted) Negative GeneticPMID:22681890
apt1adenine phosphoribosyltransferase (APRT) (predicted) Negative GeneticPMID:22681890
rpl210260S ribosomal protein L21 (predicted) Negative GeneticPMID:22681890
SPBC1348.02S. pombe specific 5Tm protein family Negative GeneticPMID:22681890
raf1CLRC ubiquitin E3 ligase complex specificiy factor Raf1/Dos1 Negative GeneticPMID:22681890
ssu72phosphoric ester hydrolase Ssu72 (predicted) Positive GeneticPMID:18818364
bun107WD repeat protein, human WDR48 family Bun107 Positive GeneticPMID:22681890
SPBC36B7.08cnucleosome assembly protein (predicted) Positive GeneticPMID:18818364
Physical Interactions

Source: BioGRID

Gene Product Evidence Reference
htb1histone H2B Htb1 Affinity Capture-MSPMID:20403971
rpl270160S ribosomal protein L27 Affinity Capture-MSPMID:20403971
rps110240S ribosomal protein S11 (predicted) Affinity Capture-MSPMID:20403971
rpl430160S ribosomal protein L37a (predicted) Affinity Capture-MSPMID:20403971
tef101translation elongation factor EF-1 alpha Ef1a-a Affinity Capture-MSPMID:20403971
rps220140S ribosomal protein S15a (predicted) Affinity Capture-MSPMID:20403971
rpl250160S ribosomal protein L25 (predicted) Affinity Capture-MSPMID:20403971
fba1fructose-bisphosphate aldolase Fba1 Affinity Capture-MSPMID:20403971
rps110140S ribosomal protein S11 (predicted) Affinity Capture-MSPMID:20403971
mtr4ATP-dependent RNA helicase, TRAMP complex subunit Mtr4 Affinity Capture-WesternPMID:20403971
Affinity Capture-MS
rpl180160S ribosomal protein L18 Affinity Capture-MSPMID:20403971
rpl200260S ribosomal protein L20 (predicted) Affinity Capture-MSPMID:20403971
rpl230260S ribosomal protein L23 Affinity Capture-MSPMID:20403971
rps170140S ribosomal protein S17 (predicted) Affinity Capture-MSPMID:20403971
rpl210160S ribosomal protein L21 (predicted) Affinity Capture-MSPMID:20403971
rpl360160S ribosomal protein L36 Affinity Capture-MSPMID:20403971
rpl70260S ribosomal protein L7 Affinity Capture-MSPMID:20403971
cid14poly(A) polymerase Cid14 Affinity Capture-MSPMID:21436456
Affinity Capture-MSPMID:20403971
Affinity Capture-Western
rps1340S ribosomal protein S13 Affinity Capture-MSPMID:20403971
rpl280260S ribosomal protein L27/L28 Affinity Capture-MSPMID:20403971
rps10240S ribosomal protein S3a (predicted) Affinity Capture-MSPMID:20403971
rpl180260S ribosomal protein L18 (predicted) Affinity Capture-MSPMID:20403971
rpl80160S ribosomal protein L8 (predicted) Affinity Capture-MSPMID:20403971
pgk1phosphoglycerate kinase Pgk1 (predicted) Affinity Capture-MSPMID:20403971
rpl80360S ribosomal protein L8 (predicted) Affinity Capture-MSPMID:20403971
rpl3160S ribosomal protein L31 (predicted) Affinity Capture-MSPMID:20403971
rpl3560S ribosomal protein L35 Affinity Capture-MSPMID:20403971
rpl40260S ribosomal protein L4 (predicted) Affinity Capture-MSPMID:20403971
rpl4460S ribosomal protein L28/L44 (predicted) Affinity Capture-MSPMID:20403971
rpl2260S ribosomal protein L22 (predicted) Affinity Capture-MSPMID:20403971
rps80140S ribosomal protein S8 (predicted) Affinity Capture-MSPMID:20403971
hhf3histone H4 h4.3 Affinity Capture-MSPMID:20403971
rpl660S ribosomal protein L6 (predicted) Affinity Capture-MSPMID:20403971
rpl1560S ribosomal protein L15 (predicted) Affinity Capture-MSPMID:20403971
rps180140S ribosomal protein S18 (predicted) Affinity Capture-MSPMID:20403971
rpl2660S ribosomal protein L26 (predicted) Affinity Capture-MSPMID:20403971
rpl200160S ribosomal protein L20a (predicted) Affinity Capture-MSPMID:20403971
eno101enolase (predicted) Affinity Capture-MSPMID:20403971
rps740S ribosomal protein S7 (predicted) Affinity Capture-MSPMID:20403971
rpl280160S ribosomal protein L27/L28 Affinity Capture-MSPMID:20403971
rpl30160S ribosomal protein L3 Affinity Capture-MSPMID:20403971
rps220240S ribosomal protein S15a (predicted) Affinity Capture-MSPMID:20403971
rps250240S ribosomal protein S25 (predicted) Affinity Capture-MSPMID:20403971
rpl1360S ribosomal protein L13 (predicted) Affinity Capture-MSPMID:20403971
rpl110260S ribosomal protein L11 (predicted) Affinity Capture-MSPMID:20403971
hhf1histone H4 h4.1 Affinity Capture-MSPMID:20403971
rpl110160S ribosomal protein L11 (predicted) Affinity Capture-MSPMID:20403971
rpl210260S ribosomal protein L21 (predicted) Affinity Capture-MSPMID:20403971
tdh1glyceraldehyde-3-phosphate dehydrogenase Tdh1 Affinity Capture-MSPMID:20403971
air1zinc knuckle TRAMP complex subunit Air1 Affinity Capture-MSPMID:20403971
rpl80260S ribosomal protein L8 (predicted) Affinity Capture-MSPMID:20403971
rpl240160S ribosomal protein L24 (predicted) Affinity Capture-MSPMID:20403971
rpl40160S ribosomal protein L4 (predicted) Affinity Capture-MSPMID:20403971
rpl170260S ribosomal protein L17 (predicted) Affinity Capture-MSPMID:20403971
hhf2histone H4 h4.2 Affinity Capture-MSPMID:20403971
rpp060S acidic ribosomal protein Rpp0 (predicted) Affinity Capture-MSPMID:20403971
rpl230160S ribosomal protein L23 Affinity Capture-MSPMID:20403971
rps180240S ribosomal protein S18 (predicted) Affinity Capture-MSPMID:20403971
rpl860S ribosomal protein L7a/L8 (predicted) Affinity Capture-MSPMID:20403971
mlo3RNA binding protein Mlo3 Affinity Capture-MSPMID:21436456
Affinity Capture-MSPMID:20403971
rpl320160S ribosomal protein L32 Affinity Capture-MSPMID:20403971
adh1alcohol dehydrogenase Adh1 Affinity Capture-MSPMID:20403971
rpl340160S ribosomal protein L34 Affinity Capture-MSPMID:20403971
External References
Database Identifier Description
NBRP SPBP35G2.08c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPBP35G2.08c Retrieval of eukaryotic orthologs (Bähler Lab)
BioGrid SPBP35G2.08c BioGRID Interaction Datasets
Expression Viewer SPBP35G2.08c Cell Cycle Expression Profile (Bähler Lab)
Expression Viewer SPBP35G2.08c Meiosis/Sporulation Expression Profies (Bähler Lab)
Expression Viewer SPBP35G2.08c Pheromone response/mating expression profiles (Bähler Lab)
Expression Viewer SPBP35G2.08c Environmental stress expression profiles (Bähler Lab)
Pomb(A) SPBP35G2.08c Polyadenylation Viewer (Gullerova lab)
pombeTV SPBP35G2.08c Transcriptome Viewer (Bähler Lab)
Cyclebase SPBP35G2.08c Cell Cycle Data
GEO SPBP35G2.08c GEO profiles
PInt SPBP35G2.08c Protein-Protein Interaction Predictor (Bähler Lab)
PeptideAtlas SPBP35G2.08c Peptides identified in tandem mass spectrometry proteomics experiments
SYSGRO SPBP35G2.08c Fission yeast phenotypic data & analysis
SPD / RIKEN15/15H06Orfeome Localization Data
UniProtKB/SwissProtQ9P795Protein air1
ModBaseQ9P795Database of comparative protein structure models
STRINGQ9P795Network display of known and predicted interactions and functional associations
RefSeq PeptideNP_595383zinc knuckle TRAMP complex subunit Air1
RefSeq mRNANM_001021290972h- zinc knuckle TRAMP complex subunit Air1 (air1), mRNA
European Nucleotide ArchiveCAB87370.2ENA Protein Mapping
UniParcUPI000228F389UniProt Archive

Literature for air1

Search: Europe PMC or PubMed

Release Version: PomBase:23_47 - 27 Oct 2014