SPCC1020.11c

Synonyms ChromosomeIII
ProductER membrane protein complex subunit 6 (predicted) Gene Start757330
Feature Typeprotein coding Gene End758483
Name Description CDS Start757365
Characterisation Statusbiological_role_inferred CDS End757861

Ensembl Gene Location
SPCC14G10.04 SPCC1020.13c xap5 SPNCRNA.473 > SPCC1020.11c < oca2 SPNCRNA.1156 SPNCRNA.1157
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
1757330757424
2757506757761
3757851758483

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF07019 Pfam Rab5-interacting 20 101 70.8 1
TMHMM tmhmm Double transmembrane domain 27 43 0.57389 1312
TMHMM tmhmm Double transmembrane domain 47 65 0.98158 1312
TMHMM tmhmm Double transmembrane domain 86 106 0.92101 1312

Sequence Feature

Term IDDescriptionSourceAll Genes
SO:0000073protein transmembrane helicesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000073

Protein Properties

Ave. residue weight 113.78 Da
Charge 1.00
Isoelectric point 8.36
Molecular weight 12.29 kDa
Number of residues 108
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Biological Process
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0034975protein folding in endoplasmic reticulumISS SGD:S000003937GO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0034975

Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005783endoplasmic reticulumIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005783
GO:0072546ER membrane protein complexISS SGD:S000003937GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0072546

Species Distribution

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DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094

Manually Curated Orthologs

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SpeciesGeneDescription


External References

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Database Identifier Description
NBRP SPCC1020.11c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPCC1020.11c Retrieval of eukaryotic orthologs
BioGrid SPCC1020.11c BioGRID Interaction Datasets
Bähler Lab SPCC1020.11c Cell Cycle Expression Profile
Bähler Lab SPCC1020.11c Meiosis/Sporulation Expression Profies
Bähler Lab SPCC1020.11c Pheromone response/mating expression profiles
Bähler Lab SPCC1020.11c Environmental stress expression profiles
Bähler Lab SPCC1020.11c Bähler Lab Transcriptome Viewer
Cyclebase SPCC1020.11c Cell Cycle Data
Entrez Gene SPCC1020.11c Link to Entrez Gene
SPD / RIKEN01/01E12Orfeome Localization Data
UniProtKB/SwissProtO59764Uncharacterized membrane protein C1020.11c
ArrayExpressO59764Link to ArrayExpress
RefSeq PeptideNP_587948DUF786 family protein
RefSeq mRNANM_001022939972h- DUF786 family protein (SPCC1020.11c), mRNA
European Nucleotide ArchiveCU329672ENA EMBL mapping
European Nucleotide ArchiveCAA18999ENA Protein Mapping
UniParcUPI0001B06274UniProt Archive

Literature for SPCC1020.11c

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Search: UK PMC or PubMed