xap5 (SPCC1020.12c)

SynonymsSPCC14G10.06 ChromosomeIII
Productxap-5-like protein Gene Start755228
Feature Typeprotein coding Gene End756290
Name Description CDS Start755257
Characterisation Statusconserved_unknown CDS End756186

Ensembl Gene Location
ump1 SPCC14G10.04 SPCC1020.13c > xap5 < SPNCRNA.473 SPCC1020.11c oca2 SPNCRNA.1156
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
1755228755405
2755469756290

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF04921 Pfam XAP5 protein 66 274 212.3 1

Protein Properties

Ave. residue weight 117.42 Da
Charge 11.50
Isoelectric point 9.13
Molecular weight 33.82 kDa
Number of residues 288
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viable
Temporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusISS PFAM:PF04921GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634
IDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year reference

Disease Association

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DescriptionSourceAll Genes
candidate disease gene for Armfield syndrome orthologTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0005269

Species Distribution

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DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
no apparent S. cerevisiae orthologTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000055
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094

Interactions

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Genetic Interactions from BioGRID

Gene Feature Evidence Source
epe1Jmjc domain chromatin associated protein Epe1 Negative Genetic
elp4elongator complex subunit Elp4 (predicted) Negative Genetic
SPBC2F12.12chuman c19orf29 ortholog Negative Genetic
cid12poly(A) polymerase Cid12 Negative Genetic
rdp1RNA-directed RNA polymerase Rdp1 Positive Genetic
get1GET complex subunit Get1 (predicted) Negative Genetic


External References

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Database Identifier Description
NBRP SPCC1020.12c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPCC1020.12c Retrieval of eukaryotic orthologs
BioGrid SPCC1020.12c BioGRID Interaction Datasets
Bähler Lab SPCC1020.12c Cell Cycle Expression Profile
Bähler Lab SPCC1020.12c Meiosis/Sporulation Expression Profies
Bähler Lab SPCC1020.12c Pheromone response/mating expression profiles
Bähler Lab SPCC1020.12c Environmental stress expression profiles
Bähler Lab SPCC1020.12c Bähler Lab Transcriptome Viewer
Cyclebase SPCC1020.12c Cell Cycle Data
Entrez Gene SPCC1020.12c Link to Entrez Gene
SPD / RIKEN13/13A07Orfeome Localization Data
UniProtKB/SwissProtQ7LKZ5FAM50 family protein C1020.12c
ArrayExpressQ7LKZ5Link to ArrayExpress
RefSeq PeptideNP_587947xap-5-like protein
RefSeq mRNANM_001022938972h- xap-5-like protein (SPCC1020.12c), mRNA
European Nucleotide ArchiveCU329672ENA EMBL mapping
European Nucleotide ArchiveCAA20659ENA Protein Mapping
UniParcUPI000006B374UniProt Archive

Literature for xap5

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Search: UK PMC or PubMed