Gene Standard NameUnassigned Characterisation Statusconserved_unknown
Systematic IDSPCC1183.02 Feature Typeprotein coding
Synonyms Name Description
Productglutathione S-transferase (predicted) Product Size220aa, 25.50 kDa
Genomic Location Chromosome III, 594963-596054 (1092nt); CDS:595060-596002 (943nt)

Ensembl Gene Location
GO Molecular Function
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0004364glutathione transferase activityIEA EC:
GO Biological Process
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0002182cytoplasmic translational elongationNASGO_REF:0000051193
GO Cellular Component
Term IDTerm NameEvidenceWith/FromReferenceCount
Fission Yeast Phenotype Ontology

Population Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0002060viable vegetative cell populationMicroscopySPCC1183.02ΔNullPECO:0000005, PECO:0000137PMID:236978063755

Cell Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0002177viable vegetative cell with normal cell morphologyMicroscopySPCC1183.02ΔNullPECO:0000005, PECO:0000137PMID:236978063078
penetrance FYPO_EXT:0000001
Ensembl transcript structure with UTRs, exons and introns


Exon Start End


Region Start End Reference
Protein Features

Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID Database InterPro Description Start End Count
PF00043 Pfam IPR004046 Glutathione S-transferase, C-terminal 125 200 6
PF13417 Pfam IPR004045 Glutathione S-transferase, N-terminal 17 76 1
PS50404 Prosite Profiles IPR004045 Glutathione S-transferase, N-terminal 2 81 5
PS50405 Prosite Profiles IPR010987 Glutathione S-transferase, C-terminal-like 89 216 7
PTHR11260 HMMPANTHER 4 207 6
PTHR11260:SF7 HMMPANTHER 4 207 3
G3DSA: Gene3D IPR012336 1 79 36
G3DSA:1.20.1050.10 Gene3D IPR010987 82 208 10
SSF47616 SuperFamily IPR010987 80 208 12
SSF52833 SuperFamily IPR012336 1 76 38

View domain organization at Pfam

Manually Curated Family or Sub-families

Term IDTerm NameReferenceCount
PBO:0000261thioredoxin familyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000261

Protein Properties

Ave. residue weight 115.93 Da
Charge 1.00
Isoelectric point 6.95
Molecular weight 25.50 kDa
Number of residues 220
Gene Expression

Quantitative Gene Expression

Protein Level

Molecules/Cell (average)DuringConditionScaleEvidenceReference
42479.74during GO:0072690PECO:0000005,
population_wideexperimental evidencePMID:23101633
14170.9during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
population_wideexperimental evidencePMID:23101633

RNA Level

Molecules/Cell (average)DuringConditionScaleEvidenceReference
6.6during GO:0072690PECO:0000005,
population_wideexperimental evidencePMID:23101633
1during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
population_wideexperimental evidencePMID:23101633
Species Distribution
faster evolving duplicate23
conserved in fungi4564
conserved in eukaryotes4482
conserved in metazoa3419
conserved in vertebrates3394
conserved in eukaryotes only2485

Manually curated orthologous groups


Orthologs in Compara

Genetic Interactions

Source: BioGRID

Gene Product Evidence Reference
ddb1damaged DNA binding protein Ddb1 Negative GeneticPMID:22681890
eso1sister chromatid cohesion protein/DNA polymerase eta Eso1 fusion protein Negative GeneticPMID:23050226
Physical Interactions

Source: BioGRID

Gene Product Evidence Reference
hhp1serine/threonine protein kinase Hhp1 Affinity Capture-MSPMID:24055157
paa1protein phosphatase regulatory subunit Paa1 Affinity Capture-MSPMID:22119525
External References
Database Identifier Description
NBRP SPCC1183.02 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPCC1183.02 Retrieval of eukaryotic orthologs (Bähler Lab)
BioGrid SPCC1183.02 BioGRID Interaction Datasets
Expression Viewer SPCC1183.02 Cell Cycle Expression Profile (Bähler Lab)
Expression Viewer SPCC1183.02 Meiosis/Sporulation Expression Profies (Bähler Lab)
Expression Viewer SPCC1183.02 Pheromone response/mating expression profiles (Bähler Lab)
Expression Viewer SPCC1183.02 Environmental stress expression profiles (Bähler Lab)
Pomb(A) SPCC1183.02 Polyadenylation Viewer (Gullerova lab)
pombeTV SPCC1183.02 Transcriptome Viewer (Bähler Lab)
Cyclebase SPCC1183.02 Cell Cycle Data
GEO SPCC1183.02 GEO profiles
PInt SPCC1183.02 Protein-Protein Interaction Predictor (Bähler Lab)
EntrezGene2539015glutathione S-transferase (predicted)
WikiGene2539015glutathione S-transferase (predicted)
SPD / RIKEN13/13C03Orfeome Localization Data
UniProtKB/SwissProtO74830Putative glutathione S-transferase C1183.02
ModBaseO74830Database of comparative protein structure models
StringO74830Network display of known and predicted interactions and functional associations
RefSeq PeptideNP_587885glutathione S-transferase (predicted)
RefSeq mRNANM_001022877972h- glutathione S-transferase (predicted) (SPCC1183.02), mRNA
European Nucleotide ArchiveCAA21082ENA Protein Mapping
UniParcUPI000006A908UniProt Archive

Literature for SPCC1183.02

Search: Europe PMC or PubMed

Release Version: PomBase:21_41 - 24 Feb 2014