spo13 (SPCC1183.12)

Synonyms SPNGAF60, SPNCRNA.546 ChromosomeIII
Productsporulation specific protein Spo13 Gene Start604961
Feature Typeprotein coding Gene End604366
Name Description CDS Start604872
Characterisation Statuspublished CDS End604405

Ensembl Gene Location
SPCC1183.03c pet127 lig4 ung1 > spo13 < SPCC1183.07 rpl101
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
1604961604857
2604805604366

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF06428 Pfam GDPGTP exchange factor Sec2p 47 119 34 2

Protein Properties

Ave. residue weight 114.94 Da
Charge 2.00
Isoelectric point 8.91
Molecular weight 15.86 kDa
Number of residues 138
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124
FYPO:0000121abnormal sporulationTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000121

Gene Ontology Annotations

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Biological Process
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0030437ascospore formationIMPTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0030437
GO:0031322ascospore-type prospore-specific spindle pole body remodelingIMPTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0031322
GO:0032120ascospore-type prospore membrane assemblyIMPTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0032120

Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005816spindle pole bodyIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005816
GO:0005824outer plaque of spindle pole bodyIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005824

Molecular Function
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005824outer plaque of spindle pole bodyIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005824
GO:0005515protein bindingIPI spo2Temporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005515

Gene Expression

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DescriptionSourceAll Genes
expressed during meiosis, specifically Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0004909

Warning

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DescriptionSourceAll Genes
previously annotated as ncRNATemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000406

Species Distribution

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DescriptionSourceAll Genes
orthologs cannot be distinguishedTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000110

Manually Curated Orthologs

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SpeciesGeneDescription

Interactions

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Physical Interactions from BioGRID

Gene Feature Evidence Source
cam1calmodulin Cam1 Co-localization

External References

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Database Identifier Description
NBRP SPCC1183.12 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPCC1183.12 Retrieval of eukaryotic orthologs
BioGrid SPCC1183.12 BioGRID Interaction Datasets
Bähler Lab SPCC1183.12 Cell Cycle Expression Profile
Bähler Lab SPCC1183.12 Meiosis/Sporulation Expression Profies
Bähler Lab SPCC1183.12 Pheromone response/mating expression profiles
Bähler Lab SPCC1183.12 Environmental stress expression profiles
Bähler Lab SPCC1183.12 Bähler Lab Transcriptome Viewer
Cyclebase SPCC1183.12 Cell Cycle Data
Entrez Gene SPCC1183.12 Link to Entrez Gene
UniProtKB/SwissProtC6Y4C9Sporulation-specific protein 13
ArrayExpressC6Y4C9Link to ArrayExpress
RefSeq_mRNA_predictedXM_002788902972h- sporulation specific protein Spo13 (spo13), mRNA
RefSeq_peptide_predictedXP_002788948sporulation specific protein Spo13
European Nucleotide ArchiveCU329672ENA EMBL mapping
European Nucleotide ArchiveCBA11516ENA Protein Mapping
UniParcUPI0001B0625AUniProt Archive

Literature for spo13

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Search: UK PMC or PubMed