SPCC1259.02c

Synonyms ChromosomeIII
ProductEndoplasmic Reticulum metallopeptidase 1 (predicted) Gene Start1037848
Feature Typeprotein coding Gene End1034065
Name Description CDS Start1036880
Characterisation Statusconserved_unknown CDS End1034412

Ensembl Gene Location
psy1 naa40 SPNCRNA.1168 SPCC825.05c rps1802 > SPCC1259.02c < SPNCRNA.1169 rpa12 iec3 cox9
Transcript
Contact Curators | Back to Top
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
110378481037648
210375961037294
310370701034065

Protein Feature Information
Contact Curators | Back to Top

Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF04389 Pfam Peptidase M28 154 320 105.9 3
53187 Superfamily 39 340 141.3 9
TMHMM tmhmm Double transmembrane domain 15 35 0.9983 1312
TMHMM tmhmm Double transmembrane domain 348 363 0.67405 1312
TMHMM tmhmm Double transmembrane domain 365 385 0.773 1312
TMHMM tmhmm Double transmembrane domain 391 415 0.96151 1312
TMHMM tmhmm Double transmembrane domain 432 452 0.99416 1312
TMHMM tmhmm Double transmembrane domain 465 494 0.84362 1312
TMHMM tmhmm Double transmembrane domain 508 528 0.87778 1312
TMHMM tmhmm Double transmembrane domain 544 564 0.91539 1312
TMHMM tmhmm Double transmembrane domain 576 596 0.99455 1312
SIGNALP_EUK Signalp 1 29 0 456

Sequence Feature

Term IDDescriptionSourceAll Genes
SO:0000073protein transmembrane helicesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000073
SO:0000065protein N-terminal signal sequenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000065

Protein Properties

Ave. residue weight 111.73 Da
Charge -15.00
Isoelectric point 5.13
Molecular weight 91.84 kDa
Number of residues 822
Sequence
Contact Curators | Back to Top

Fission Yeast Phenotype

 Contact Curators | Back to Top
Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

 Contact Curators | Back to Top
Cellular Component
Contact Curators | Back to Top
GO IDTermEvidenceWith/FromSourceAll Genes
GO:0030176integral to endoplasmic reticulum membraneISS UniProtKB:Q7Z2K6GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0030176

Molecular Function
Contact Curators | Back to Top
GO IDTermEvidenceWith/FromSourceAll Genes
GO:0008233peptidase activityISS PFAM:PF04389GO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0008233

Species Distribution

 Contact Curators | Back to Top
DescriptionSourceAll Genes
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095

Manually Curated Orthologs

 Contact Curators | Back to Top
SpeciesGeneDescription


External References

 Contact Curators | Back to Top
Database Identifier Description
NBRP SPCC1259.02c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPCC1259.02c Retrieval of eukaryotic orthologs
BioGrid SPCC1259.02c BioGRID Interaction Datasets
Bähler Lab SPCC1259.02c Cell Cycle Expression Profile
Bähler Lab SPCC1259.02c Meiosis/Sporulation Expression Profies
Bähler Lab SPCC1259.02c Pheromone response/mating expression profiles
Bähler Lab SPCC1259.02c Environmental stress expression profiles
Bähler Lab SPCC1259.02c Bähler Lab Transcriptome Viewer
Cyclebase SPCC1259.02c Cell Cycle Data
Entrez Gene SPCC1259.02c Link to Entrez Gene
SPD / RIKEN28/28H05Orfeome Localization Data
UniProtKB/SwissProtO94702Uncharacterized zinc metalloprotease C1259.02c
ArrayExpressO94702Link to ArrayExpress
RefSeq PeptideNP_588058peptidase (predicted)
RefSeq mRNANM_001023050972h- peptidase (predicted) (SPCC1259.02c), mRNA
European Nucleotide ArchiveCU329672ENA EMBL mapping
European Nucleotide ArchiveCAA22540ENA Protein Mapping
UniParcUPI000006A41AUniProt Archive

Literature for SPCC1259.02c

 Contact Curators | Back to Top
Search: UK PMC or PubMed