SPCC1393.09c

Synonyms ChromosomeIII
ProductRWD domain protein, implicated in translation Gene Start816595
Feature Typeprotein coding Gene End815087
Name Description CDS Start816457
Characterisation Statusconserved_unknown CDS End815442

Ensembl Gene Location
mug4 SPCC1393.08 > SPCC1393.09c < SPNCRNA.1160 SPCTRNAILE.09 ctr4 ten1 SPCTRNAGLY.11 SPCC1393.11
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
1816595816394
2816247816179
3816106815970
4815819815087

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF05773 Pfam RWD domain 5 110 72.7 5
54495 Superfamily 3 122 63.3 19
SM00591 Smart RWD domain 7 114 87.8 6
PS50908 PROSITE RWD domain 7 114 20.252 6

Protein Properties

Ave. residue weight 114.83 Da
Charge -20.50
Isoelectric point 4.24
Molecular weight 24.69 kDa
Number of residues 215
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634
GO:0005737cytoplasmISS SGD:S000002559GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005737
GO:0005829cytosolIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005829

Species Distribution

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DescriptionSourceAll Genes
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096

Manually Curated Orthologs

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SpeciesGeneDescription


External References

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Database Identifier Description
NBRP SPCC1393.09c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPCC1393.09c Retrieval of eukaryotic orthologs
BioGrid SPCC1393.09c BioGRID Interaction Datasets
Bähler Lab SPCC1393.09c Cell Cycle Expression Profile
Bähler Lab SPCC1393.09c Meiosis/Sporulation Expression Profies
Bähler Lab SPCC1393.09c Pheromone response/mating expression profiles
Bähler Lab SPCC1393.09c Environmental stress expression profiles
Bähler Lab SPCC1393.09c Bähler Lab Transcriptome Viewer
Cyclebase SPCC1393.09c Cell Cycle Data
Entrez Gene SPCC1393.09c Link to Entrez Gene
SPD / RIKEN15/15B01Orfeome Localization Data
UniProtKB/SwissProtO94721RWD domain-containing protein C1393.09c
ArrayExpressO94721Link to ArrayExpress
RefSeq PeptideNP_587967RWD domain-containing protein
RefSeq mRNANM_001022958972h- RWD domain-containing protein (SPCC1393.09c), mRNA
European Nucleotide ArchiveCU329672ENA EMBL mapping
European Nucleotide ArchiveCAB39357ENA Protein Mapping
UniParcUPI000006C09CUniProt Archive

Literature for SPCC1393.09c

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Search: UK PMC or PubMed