SPCC1442.13c

Synonyms ChromosomeIII
ProductRNA-binding protein, G-patch type Gene Start1792123
Feature Typeprotein coding Gene End1790811
Name Description CDS Start1791909
Characterisation Statusconserved_unknown CDS End1791346

Ensembl Gene Location
rpb3 trp3 SPCC1442.19 SPNCRNA.503 SPCC1442.11c SPCTRNAPRO.09 pps1 > SPCC1442.13c < SPNCRNA.1229 SPCC1442.14c cox18 zta1 SPNCRNA.1230 ist1 SPCC285.03
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
117921231790811

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF01585 Pfam G-patch domain 146 186 43.9 7
SM00443 Smart G-patch domain 143 187 46 7
PS50174 PROSITE G-patch domain 145 187 14.476 7

Protein Properties

Ave. residue weight 112.43 Da
Charge 12.50
Isoelectric point 10.39
Molecular weight 21.03 kDa
Number of residues 187
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Biological Process
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0007126meiosisIMPTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0007126

Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634
GO:0005816spindle pole bodyIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005816
GO:0005819spindleIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005819

Warning

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DescriptionSourceAll Genes
gene structure updatedTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000070

Protein Family

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DescriptionSourceAll Genes
G-patch domainTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000605

Species Distribution

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DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094
orthologs cannot be distinguishedTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000110


External References

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Database Identifier Description
NBRP SPCC1442.13c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPCC1442.13c Retrieval of eukaryotic orthologs
BioGrid SPCC1442.13c BioGRID Interaction Datasets
Bähler Lab SPCC1442.13c Cell Cycle Expression Profile
Bähler Lab SPCC1442.13c Meiosis/Sporulation Expression Profies
Bähler Lab SPCC1442.13c Pheromone response/mating expression profiles
Bähler Lab SPCC1442.13c Environmental stress expression profiles
Bähler Lab SPCC1442.13c Bähler Lab Transcriptome Viewer
Cyclebase SPCC1442.13c Cell Cycle Data
Entrez Gene SPCC1442.13c Link to Entrez Gene
SPD / RIKEN05/05H11Orfeome Localization Data
UniProtKB/SwissProtO94585Meiotically up-regulated protein C1442.13c
ArrayExpressO94585Link to ArrayExpress
RefSeq PeptideNP_588327RNA-binding protein, G-patch type
RefSeq mRNANM_001023318972h- RNA-binding protein, G-patch type (SPCC1442.13c), mRNA
European Nucleotide ArchiveCU329672ENA EMBL mapping
European Nucleotide ArchiveCAA21447ENA Protein Mapping
UniParcUPI0000161F2EUniProt Archive

Literature for SPCC1442.13c

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Search: UK PMC or PubMed