SPCC1442.19

Synonyms ChromosomeIII
Productmitochondrial ribosomal protein Mrp49 (predicted) Gene Start1787161
Feature Typeprotein coding Gene End1788596
Name Description CDS Start1787290
Characterisation Statusbiological_role_inferred CDS End1787878

Ensembl Gene Location
pre8 SPCC1442.07c cox12 SPNCRNA.1228 SPNCRNA.502 rpb3 trp3 > SPCC1442.19 < SPNCRNA.503 SPCC1442.11c SPCTRNAPRO.09 pps1 SPCC1442.13c SPNCRNA.1229 SPCC1442.14c cox18 zta1
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
117871611787429
217876111788596

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF05047 Pfam Ribosomal protein/NADH dehydrogenase domain 46 97 24.6 2
SM00916 Smart Ribosomal protein/NADH dehydrogenase domain 38 113 16.7 2

Protein Properties

Ave. residue weight 113.40 Da
Charge 9.50
Isoelectric point 9.87
Molecular weight 15.31 kDa
Number of residues 135
Sequence
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Gene Ontology Annotations

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Biological Process
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0032543mitochondrial translationISS SGD:S000001650GO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0032543

Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005762mitochondrial large ribosomal subunitISS SGD:S000001650GO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005762

Warning

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DescriptionSourceAll Genes
new gene Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000082

Species Distribution

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DescriptionSourceAll Genes
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096

Manually Curated Orthologs

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SpeciesGeneDescription


External References

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Database Identifier Description
NBRP SPCC1442.19 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPCC1442.19 Retrieval of eukaryotic orthologs
BioGrid SPCC1442.19 BioGRID Interaction Datasets
Bähler Lab SPCC1442.19 Cell Cycle Expression Profile
Bähler Lab SPCC1442.19 Meiosis/Sporulation Expression Profies
Bähler Lab SPCC1442.19 Pheromone response/mating expression profiles
Bähler Lab SPCC1442.19 Environmental stress expression profiles
Bähler Lab SPCC1442.19 Bähler Lab Transcriptome Viewer
Cyclebase SPCC1442.19 Cell Cycle Data
Entrez Gene SPCC1442.19 Link to Entrez Gene
UniProtKB/SwissProtC6Y4D2Probable 60S ribosomal protein MRP49, mitochondrial
ArrayExpressC6Y4D2Link to ArrayExpress
RefSeq mRNANM_001023316972h- sequence orphan (SPCC1442.11c), mRNA
RefSeq_mRNA_predictedXM_002788905972h- mitochondrial ribosomal protein Mrp49 (SPCC1442.19), mRNA
RefSeq_peptide_predictedXP_002788951mitochondrial ribosomal protein Mrp49
European Nucleotide ArchiveCU329672ENA EMBL mapping
European Nucleotide ArchiveCBA11519ENA Protein Mapping
UniParcUPI0001B06267UniProt Archive

Literature for SPCC1442.19

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Search: UK PMC or PubMed