sif2 (SPCC16C4.01)

SynonymsSPCC5E4.09 ChromosomeIII
ProductSad1 interacting factor 2 (predicted) Gene Start658752
Feature Typeprotein coding Gene End660714
Name Description CDS Start658832
Characterisation Statusbiological_role_inferred CDS End660321

Ensembl Gene Location
SPCC5E4.10c SPNCRNA.1150 smc6 rpl2802 SPCC16C4.19 SPNCRNA.1151 > sif2 < SPCC16C4.20c SPCC16C4.02c pin1 SPCC16C4.04
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
1658752659139
2659223659488
3659567659628
4659709660197
5660298660714

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF02582 Pfam Protein of unknown function DUF155 157 331 177.3 2
47954 Superfamily 196 309 56.8 14
TMHMM tmhmm Double transmembrane domain 357 376 0.99937 1312

Sequence Feature

Term IDDescriptionSourceAll Genes
SO:0000073protein transmembrane helicesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000073

Protein Properties

Ave. residue weight 116.86 Da
Charge -10.50
Isoelectric point 4.89
Molecular weight 44.64 kDa
Number of residues 382
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Biological Process
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0007127meiosis IISS UniProtKB:Q03441GO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0007127

Species Distribution

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DescriptionSourceAll Genes
conserved in BacteriaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000086
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094

Manually Curated Orthologs

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SpeciesGeneDescription

Interactions

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Physical Interactions from BioGRID

Gene Feature Evidence Source
sad1spindle pole body protein Sad1 Two-hybrid

External References

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Database Identifier Description
NBRP SPCC16C4.01 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPCC16C4.01 Retrieval of eukaryotic orthologs
BioGrid SPCC16C4.01 BioGRID Interaction Datasets
Bähler Lab SPCC16C4.01 Cell Cycle Expression Profile
Bähler Lab SPCC16C4.01 Meiosis/Sporulation Expression Profies
Bähler Lab SPCC16C4.01 Pheromone response/mating expression profiles
Bähler Lab SPCC16C4.01 Environmental stress expression profiles
Bähler Lab SPCC16C4.01 Bähler Lab Transcriptome Viewer
Cyclebase SPCC16C4.01 Cell Cycle Data
Entrez Gene SPCC16C4.01 Link to Entrez Gene
SPD / RIKEN45/45C03Orfeome Localization Data
UniProtKB/SwissProtO74446Sad1-interacting factor 2
ArrayExpressO74446Link to ArrayExpress
RefSeq PeptideNP_587910Sad1 interacting factor 2
RefSeq mRNANM_001022901972h- Sad1 interacting factor 2 (sif2), mRNA
European Nucleotide ArchiveCU329672ENA EMBL mapping
European Nucleotide ArchiveCAA21964ENA Protein Mapping
UniParcUPI0001B06263UniProt Archive

Literature for sif2

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Search: UK PMC or PubMed