SPCC16C4.16c

Synonyms ChromosomeIII
Productconserved fungal protein Gene Start698599
Feature Typeprotein coding Gene End697422
Name Description CDS Start698399
Characterisation Statusconserved_unknown CDS End697605

Ensembl Gene Location
SPNCRNA.471 rpl1201 sfc4 rml2 > SPCC16C4.16c < mug123 taf6 SPNCRNA.1152 vps5 SPCPJ732.02c
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
1698599698180
2698127697875
3697752697422

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF10309 Pfam Protein of unknown function DUF2414 32 91 78.9 1

Protein Properties

Ave. residue weight 115.80 Da
Charge 1.50
Isoelectric point 7.05
Molecular weight 23.85 kDa
Number of residues 206
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634
GO:0005829cytosolIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005829

Species Distribution

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DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
no apparent S. cerevisiae orthologTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000055
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094

Manually Curated Orthologs

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SpeciesGeneDescription

Interactions

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Physical Interactions from BioGRID

Gene Feature Evidence Source
mlo3RNA binding protein Mlo3 Affinity Capture-MS

External References

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Database Identifier Description
NBRP SPCC16C4.16c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPCC16C4.16c Retrieval of eukaryotic orthologs
BioGrid SPCC16C4.16c BioGRID Interaction Datasets
Bähler Lab SPCC16C4.16c Cell Cycle Expression Profile
Bähler Lab SPCC16C4.16c Meiosis/Sporulation Expression Profies
Bähler Lab SPCC16C4.16c Pheromone response/mating expression profiles
Bähler Lab SPCC16C4.16c Environmental stress expression profiles
Bähler Lab SPCC16C4.16c Bähler Lab Transcriptome Viewer
Cyclebase SPCC16C4.16c Cell Cycle Data
Entrez Gene SPCC16C4.16c Link to Entrez Gene
SPD / RIKEN05/05D11Orfeome Localization Data
UniProtKB/SwissProtO74460Uncharacterized protein C16C4.16c
ArrayExpressO74460Link to ArrayExpress
RefSeq PeptideNP_587926conserved fungal protein
RefSeq mRNANM_001022917972h- conserved fungal protein (SPCC16C4.16c), mRNA
European Nucleotide ArchiveCU329672ENA EMBL mapping
European Nucleotide ArchiveCAA20754ENA Protein Mapping
UniParcUPI0001B0626EUniProt Archive

Literature for SPCC16C4.16c

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Search: UK PMC or PubMed