SPCC16C4.22

Synonyms SPNG2185, SPNCRNA.470 ChromosomeIII
Producthistone-like transcription factor family (CBF/NF-Y) Gene Start684656
Feature Typeprotein coding Gene End685496
Name Description CDS Start684828
Characterisation Statusconserved_unknown CDS End685192

Ensembl Gene Location
SPNCRNA.469 sts5 > SPCC16C4.22 < SPCC16C4.10 pef1 naa20 SPNCRNA.471 rpl1201 sfc4
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
1684656684947
2685049685496

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF00808 Pfam Transcription factor CBF/NF-Y/archaeal histone 10 71 54 7
47113 Superfamily 7 87 61.8 26

Protein Properties

Ave. residue weight 116.24 Da
Charge 1.50
Isoelectric point 8.45
Molecular weight 10.11 kDa
Number of residues 87
Sequence
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Gene Ontology Annotations

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Biological Process
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0006351transcription, DNA-dependentISS PFAM:PF00808GO_REF:0000024Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0006351

Warning

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DescriptionSourceAll Genes
previously annotated as ncRNATemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000406

Protein Family

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DescriptionSourceAll Genes
histone foldTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000297

Species Distribution

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DescriptionSourceAll Genes
conserved in ArchaeaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000130
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
orthologs cannot be distinguishedTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000110


External References

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Database Identifier Description
NBRP SPCC16C4.22 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPCC16C4.22 Retrieval of eukaryotic orthologs
BioGrid SPCC16C4.22 BioGRID Interaction Datasets
Bähler Lab SPCC16C4.22 Cell Cycle Expression Profile
Bähler Lab SPCC16C4.22 Meiosis/Sporulation Expression Profies
Bähler Lab SPCC16C4.22 Pheromone response/mating expression profiles
Bähler Lab SPCC16C4.22 Environmental stress expression profiles
Bähler Lab SPCC16C4.22 Bähler Lab Transcriptome Viewer
Cyclebase SPCC16C4.22 Cell Cycle Data
Entrez Gene SPCC16C4.22 Link to Entrez Gene
UniProtKB/SwissProtC6Y4D0Putative transcription factor C16C4.22
ArrayExpressC6Y4D0Link to ArrayExpress
RefSeq_mRNA_predictedXM_002788903972h- histone-like transcription factor family (CBF/NF-Y) (SPCC16C4.22), mRNA
RefSeq_peptide_predictedXP_002788949histone-like transcription factor family (CBF/NF-Y)
European Nucleotide ArchiveCU329672ENA EMBL mapping
European Nucleotide ArchiveCBA11517ENA Protein Mapping
UniParcUPI0001B0626DUniProt Archive

Literature for SPCC16C4.22

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Search: UK PMC or PubMed