SPCC285.05

Gene Standard NameUnassigned ChromosomeIII
Systematic IDSPCC285.05 Gene Start1802086
Synonyms Gene End1804181
Productpurine nucleoside transmembrane transporter (predicted) Gene Length2096
Feature Typeprotein coding CDS Start1802662
Name Description CDS End1803708
Characterisation Statusbiological_role_inferred CDS Length1047

Ensembl Gene Location
  1. zta1
  2. SPNCRNA.1230
  3. ist1
  4. SPCC285.03
  5. SPNCRNA.1231
  6. SPCC285.04
  7. SPCC285.05
  8. SPNCRNA.1232
  9. wtf17
  10. wtf18
  11. ret2
  12. cgs2
Fission Yeast Phenotype Ontology

Ontology Graph

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Term IDTerm NameEvidenceAlleleAllele TypeExpressionConditionReference
FYPO:0002060viable vegetative cell populationMicroscopySPCC285.05delta (deletion)deletionPMID:20473289
GO Molecular Function

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Term IDTerm NameEvidenceWith/FromReference
GO:0015211purine nucleoside transmembrane transporter activityISMPFAM:PF06516GO_REF:0000001
GO Biological Process

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Term IDTerm NameEvidenceWith/FromReference
GO:0015860purine nucleoside transmembrane transportISMPFAM:PF06516GO_REF:0000024
GO Cellular Component

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Term IDTerm NameEvidenceWith/FromReference
GO:0005783endoplasmic reticulumIDAPMID:16823372
GO:0016021integral to membraneICGO:0015211GO_REF:0000001
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
118020861804181

References

Region Start End Reference
three_prime_UTR18037091804181PMID:21511999
three_prime_UTR18037091804181PMID:21511999
five_prime_UTR18020861802661PMID:21511999
Protein Features
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Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID InterPro Database Description Start End All Genes
PF06516 IPR009486 Pfam Purine nucleoside permease 31 347 1
TMhelix TMHMM 2 24 955
PIRSF013171 IPR009486 PIRSF Purine nucleoside permease 1 348 1
SignalP-noTM signalp 1 21 212

View domain organization at Pfam

Sequence Ontology

Term IDTerm NameReference
SO:0000418signal_peptide

Protein Properties

Ave. residue weight 109.60 Da
Charge -10.00
Isoelectric point 4.56
Molecular weight 38.14 kDa
Number of residues 348
Sequence
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Gene Expression
DescriptionEvidenceDuringConditionRangeAverage per CellReference
protein levelexperimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000127,
PECO:0000014,
PECO:0000005		population_wide56473.28PMID:23101633
experimental evidencesingle-celled organism vegetative growth phasePECO:0000014,
PECO:0000005		population_wide9513.25PMID:23101633
RNA levelexperimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000127,
PECO:0000014,
PECO:0000005		population_wide4.2PMID:23101633
experimental evidencesingle-celled organism vegetative growth phasePECO:0000014,
PECO:0000005		population_wide5.5PMID:23101633
Species Distribution
DescriptionQualifierReference
no apparent S. cerevisiae ortholog
conserved in fungi only
conserved in fungi
conserved in eukaryotes
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Genetic Interactions

Source: BioGRID

Gene Product Evidence Reference
tip41TIP41-like type 2a phosphatase regulator Tip41 Negative GeneticPMID:22681890
clr1cryptic loci regulator Clr1 Negative GeneticPMID:22681890
pek1MAP kinase kinase Pek1 Negative GeneticPMID:22681890
usp102U1 snRNP-associated protein Usp102 Negative GeneticPMID:22681890
dsc3Golgi Dsc E3 ligase complex subunit Dsc3 Negative GeneticPMID:21504829
sap114U2 snRNP subunit Sap114 Negative GeneticPMID:22681890
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External References
Database Identifier Description
NBRP SPCC285.05 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPCC285.05 Retrieval of eukaryotic orthologs
BioGrid SPCC285.05 BioGRID Interaction Datasets
Bähler Lab SPCC285.05 Cell Cycle Expression Profile
Bähler Lab SPCC285.05 Meiosis/Sporulation Expression Profies
Bähler Lab SPCC285.05 Pheromone response/mating expression profiles
Bähler Lab SPCC285.05 Environmental stress expression profiles
Bähler Lab SPCC285.05 Bähler Lab Transcriptome Viewer
Cyclebase SPCC285.05 Cell Cycle Data
PInt SPCC285.05 Bähler Lab Protein-Protein Interaction Predictor
Entrez Gene SPCC285.05 Entrez Gene
EntrezGene2539334purine nucleoside transporter (predicted)
WikiGene2539334purine nucleoside transporter (predicted)
SPD / RIKEN16/16A02Orfeome Localization Data
UniProtKB/SwissProtO74493Uncharacterized protein C285.05
ModBaseO74493Database of comparative protein structure models
Pfam Protein DomainsO74493Pfam Domain Arrangement
RefSeq PeptideNP_588334purine nucleoside transporter (predicted)
RefSeq mRNANM_001023325972h- purine nucleoside transporter (predicted) (SPCC285.05), mRNA
European Nucleotide ArchiveCAA20844ENA Protein Mapping
UniParcUPI0000069C5EUniProt Archive

Literature for SPCC285.05
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Search: UK PMC or PubMed

Release Version: PomBase:18_35 - 11 May 2013