SPCC4G3.17

Synonyms ChromosomeIII
ProductHD domain metal dependent phosphohydrolase (predicted) Gene Start439928
Feature Typeprotein coding Gene End438715
Name Description CDS Start439660
Characterisation Statusconserved_unknown CDS End439064

Ensembl Gene Location
SPCC306.11 alp16 SPNCRNA.1138 SPCC4G3.18 > SPCC4G3.17 < SPCC4G3.16 not2 mdj1 SPCC4G3.13c
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
1439928438715

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF01966 Pfam HD domain 40 143 27.1 1
109604 Superfamily 6 192 135.7 1
SM00471 Smart HD/PDEase domain 34 153 34.7 1

Protein Properties

Ave. residue weight 115.81 Da
Charge -2.00
Isoelectric point 5.96
Molecular weight 22.93 kDa
Number of residues 198
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634
GO:0005829cytosolIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005829

Species Distribution

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DescriptionSourceAll Genes
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095

Manually Curated Orthologs

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SpeciesGeneDescription


External References

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Database Identifier Description
NBRP SPCC4G3.17 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPCC4G3.17 Retrieval of eukaryotic orthologs
BioGrid SPCC4G3.17 BioGRID Interaction Datasets
Bähler Lab SPCC4G3.17 Cell Cycle Expression Profile
Bähler Lab SPCC4G3.17 Meiosis/Sporulation Expression Profies
Bähler Lab SPCC4G3.17 Pheromone response/mating expression profiles
Bähler Lab SPCC4G3.17 Environmental stress expression profiles
Bähler Lab SPCC4G3.17 Bähler Lab Transcriptome Viewer
Cyclebase SPCC4G3.17 Cell Cycle Data
Entrez Gene SPCC4G3.17 Link to Entrez Gene
SPD / RIKEN06/06E12Orfeome Localization Data
UniProtKB/SwissProtP87242HD domain-containing protein C4G3.17
ArrayExpressP87242Link to ArrayExpress
RefSeq PeptideNP_587821metal dependent phosphohydrolase (predicted)
RefSeq mRNANM_001022814972h- metal dependent phosphohydrolase (predicted) (SPCC4G3.17), mRNA
European Nucleotide ArchiveCU329672ENA EMBL mapping
European Nucleotide ArchiveCAB09764ENA Protein Mapping
UniParcUPI000006C76DUniProt Archive

Literature for SPCC4G3.17

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Search: UK PMC or PubMed