SPCC5E4.10c

Synonyms ChromosomeIII
Producthuman leukocyte receptor 1 ortholog Gene Start652710
Feature Typeprotein coding Gene End650897
Name Description CDS Start652455
Characterisation Statusconserved_unknown CDS End651622

Ensembl Gene Location
cut1 SPCC5E4.05c SPNCRNA.1149 > SPCC5E4.10c < SPNCRNA.1150 smc6 rpl2802 SPCC16C4.19 SPNCRNA.1151 sif2
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
1652710652419
2652371652280
3652225652115
4652045651973
5651905650897

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes

Protein Properties

Ave. residue weight 120.78 Da
Charge 16.50
Isoelectric point 10.40
Molecular weight 23.91 kDa
Number of residues 198
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000124viableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000124

Gene Ontology Annotations

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Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634
GO:0005730nucleolusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005730

Warning

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DescriptionSourceAll Genes
gene structure updatedTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000070

Species Distribution

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DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
no apparent S. cerevisiae orthologTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000055
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094

Manually Curated Orthologs

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SpeciesGeneDescription

Interactions

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Physical Interactions from BioGRID

Gene Feature Evidence Source
prp19ubiquitin-protein ligase E4 Affinity Capture-MS
cwf2RNA-binding protein Cwf2 Affinity Capture-MS
prp17splicing factor Prp17 Affinity Capture-MS

External References

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Database Identifier Description
NBRP SPCC5E4.10c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPCC5E4.10c Retrieval of eukaryotic orthologs
BioGrid SPCC5E4.10c BioGRID Interaction Datasets
Bähler Lab SPCC5E4.10c Cell Cycle Expression Profile
Bähler Lab SPCC5E4.10c Meiosis/Sporulation Expression Profies
Bähler Lab SPCC5E4.10c Pheromone response/mating expression profiles
Bähler Lab SPCC5E4.10c Environmental stress expression profiles
Bähler Lab SPCC5E4.10c Bähler Lab Transcriptome Viewer
Cyclebase SPCC5E4.10c Cell Cycle Data
Entrez Gene SPCC5E4.10c Link to Entrez Gene
SPD / RIKEN02/02F05Orfeome Localization Data
UniProtKB/SwissProtQ9P7Z6Uncharacterized protein C5E4.10c
ArrayExpressQ9P7Z6Link to ArrayExpress
RefSeq PeptideNP_587905sequence orphan
RefSeq mRNANM_001022897972h- sequence orphan (SPCC5E4.10c), mRNA
European Nucleotide ArchiveCU329672ENA EMBL mapping
European Nucleotide ArchiveCAB71863ENA Protein Mapping
UniParcUPI000228F4B2UniProt Archive

Literature for SPCC5E4.10c

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Search: UK PMC or PubMed