sec59 (SPCC63.10c)

Synonyms ChromosomeIII
Productdolichol kinase Sec59 (predicted) Gene Start856452
Feature Typeprotein coding Gene End854405
Name Description CDS Start856222
Characterisation Statusbiological_role_inferred CDS End854651

Ensembl Gene Location
SPCC63.07 atg1 SPRRNA.55 > sec59 < prp28 pup3 SPCC63.13 SPCC63.14
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
1856452855984
2855926854405

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF01148 Pfam Phosphatidate cytidylyltransferase 383 481 40.9 3
TMHMM tmhmm Double transmembrane domain 58 78 0.9764 1312
TMHMM tmhmm Double transmembrane domain 85 104 0.64239 1312
TMHMM tmhmm Double transmembrane domain 158 180 0.95175 1312
TMHMM tmhmm Double transmembrane domain 186 207 0.97922 1312
TMHMM tmhmm Double transmembrane domain 216 237 0.99085 1312
TMHMM tmhmm Double transmembrane domain 269 287 0.99987 1312
TMHMM tmhmm Double transmembrane domain 311 329 0.73478 1312
TMHMM tmhmm Double transmembrane domain 334 352 0.9573 1312
TMHMM tmhmm Double transmembrane domain 375 394 0.99948 1312
TMHMM tmhmm Double transmembrane domain 401 421 0.99388 1312
TMHMM tmhmm Double transmembrane domain 442 462 0.95704 1312

Protein Properties

Ave. residue weight 113.94 Da
Charge 10.00
Isoelectric point 7.83
Molecular weight 57.42 kDa
Number of residues 504
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000049inviableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000049

Gene Ontology Annotations

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Biological Process
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0006487protein N-linked glycosylationISS SGD:S000004615GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0006487

Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005783endoplasmic reticulumIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005783
GO:0005789endoplasmic reticulum membraneISS SGD:S000004615GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005789

Molecular Function
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0004168dolichol kinase activityISS SGD:S000004615GO_REF:0000001Temporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0004168

Warning

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DescriptionSourceAll Genes
gene structure updated Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with the citation reference [author (year)]Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000070

Species Distribution

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DescriptionSourceAll Genes
predominantly uniformly single copy (one to one)Temporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000104
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096

Manually Curated Orthologs

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SpeciesGeneDescription


External References

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Database Identifier Description
NBRP SPCC63.10c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPCC63.10c Retrieval of eukaryotic orthologs
BioGrid SPCC63.10c BioGRID Interaction Datasets
Bähler Lab SPCC63.10c Cell Cycle Expression Profile
Bähler Lab SPCC63.10c Meiosis/Sporulation Expression Profies
Bähler Lab SPCC63.10c Pheromone response/mating expression profiles
Bähler Lab SPCC63.10c Environmental stress expression profiles
Bähler Lab SPCC63.10c Bähler Lab Transcriptome Viewer
Cyclebase SPCC63.10c Cell Cycle Data
Entrez Gene SPCC63.10c Link to Entrez Gene
SPD / RIKEN25/25C01Orfeome Localization Data
UniProtKB/SwissProtQ9Y7T6Uncharacterized membrane protein C63.10c
ArrayExpressQ9Y7T6Link to ArrayExpress
RefSeq PeptideNP_587983dolichol kinase (predicted)
RefSeq mRNANM_001022974972h- dolichol kinase (predicted) (SPCC63.10c), mRNA
European Nucleotide ArchiveCU329672ENA EMBL mapping
European Nucleotide ArchiveCAB40014ENA Protein Mapping
UniParcUPI000228F3C9UniProt Archive

Literature for sec59

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Search: UK PMC or PubMed