mmi1 (SPCC736.12c)

Synonyms ChromosomeIII
ProductYTH family RNA binding protein Mmi1 Gene Start340150
Feature Typeprotein coding Gene End337088
Name DescriptionMeiotic mRNA Interception CDS Start339567
Characterisation Statuspublished CDS End337829

Ensembl Gene Location
SPCTRNAPHE.04 mrps8 SPNCRNA.1131 SPNCRNA.463 SPNCRNA.464 ago1 > mmi1 < SPCC736.13 dis1 SPNCRNA.1132 SPNCRNA.578
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
1340150339483
2339354338395
3338347338232
4338178338030
5337985337088

Protein Feature Information
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Protein Features

Ensembl protein image with mapped locations of structural domains
Feature ID Database Description Start End Score All Genes
PF04146 Pfam YTH domain 350 477 61.4 1
PS50882 PROSITE YTH domain 350 476 13.842 1


Protein Modifications

Term IDDescriptionSourceAll Genes
MOD:00696phosphorylated residueTemporary processing gif - replaced by AJAX with count of genes annotated with the term MOD:00696

Protein Properties

Ave. residue weight 111.76 Da
Charge 19.50
Isoelectric point 9.40
Molecular weight 54.54 kDa
Number of residues 488
Sequence
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Fission Yeast Phenotype

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Term IDDescriptionSourceAll Genes
FYPO:0000049inviableTemporary processing gif - replaced by AJAX with count of genes annotated with the term FYPO:0000049

Gene Ontology Annotations

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Biological Process
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0033621nuclear-transcribed mRNA catabolic process, meiosis-specific transcriptsIMPTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0033621
GO:0045835negative regulation of meiosisIMPTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0045835

Cellular Component
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0005634nucleusIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0005634
GO:0033620Mei2 nuclear dotIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0033620

Molecular Function
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GO IDTermEvidenceWith/FromSourceAll Genes
GO:0003723RNA bindingIPI sme2Temporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0003723
GO:0003729mRNA bindingIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0003729
GO:0003729mRNA bindingIDATemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - PubMed ID replaced by AJAX with the autor year referenceTemporary processing gif - replaced by AJAX with count of genes annotated with the term GO:0003729

Species Distribution

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DescriptionSourceAll Genes
conserved in FungiTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000057
conserved in Eukaryotes onlyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000096
conserved in VertebratesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000095
conserved in EukaryotesTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000058
conserved in MetazoaTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000094

Manually Curated Orthologs

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SpeciesGeneDescription

Interactions

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Genetic Interactions from BioGRID

Gene Feature Evidence Source
rrp6exosome 3'-5' exoribonuclease subunit Rrp6 (predicted) Phenotypic Enhancement
pab2poly(A) binding protein Pab2 Phenotypic Enhancement

Physical Interactions from BioGRID

Gene Feature Evidence Source
pla1poly(A) polymerase Pla1 Affinity Capture-Western
cid14poly(A) polymerase Cid14 Affinity Capture-MS
pab2poly(A) binding protein Pab2 PCA
Affinity Capture-Western
red1RNA elimination defective protein Red1 Affinity Capture-Western
Affinity Capture-Western

External References

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Database Identifier Description
NBRP SPCC736.12c Fission yeast strain database, National BioResource Project (Japan)
YOGY SPCC736.12c Retrieval of eukaryotic orthologs
BioGrid SPCC736.12c BioGRID Interaction Datasets
Bähler Lab SPCC736.12c Cell Cycle Expression Profile
Bähler Lab SPCC736.12c Meiosis/Sporulation Expression Profies
Bähler Lab SPCC736.12c Pheromone response/mating expression profiles
Bähler Lab SPCC736.12c Environmental stress expression profiles
Bähler Lab SPCC736.12c Bähler Lab Transcriptome Viewer
Cyclebase SPCC736.12c Cell Cycle Data
Entrez Gene SPCC736.12c Link to Entrez Gene
SPD / RIKEN44/44H11Orfeome Localization Data
UniProtKB/SwissProtO74958YTH domain-containing protein mmi1
ArrayExpressO74958Link to ArrayExpress
RefSeq PeptideNP_587783YTH family protein Mmi1
RefSeq mRNANM_001022776972h- YTH family protein Mmi1 (mmi1), mRNA
European Nucleotide ArchiveCU329672ENA EMBL mapping
European Nucleotide ArchiveCAA19276ENA Protein Mapping
UniParcUPI0001B062C2UniProt Archive

Literature for mmi1

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Search: UK PMC or PubMed