elp2 (SPCC895.06)


Gene Standard Nameelp2 Characterisation Statusbiological_role_inferred
Systematic IDSPCC895.06 Feature Typeprotein coding
Synonyms Name Description
Productelongator complex subunit Elp2 (predicted) Product Size760aa, 84.95 kDa
Genomic Location Chromosome III, 1008448-1011121 (2674nt); CDS:1008473-1010876 (2404nt)

Ensembl Gene Location
GO Biological Process
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0002098tRNA wobble uridine modificationISOSGD:S000003432GO_REF:000002414
GO Cellular Component
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0033588Elongator holoenzyme complexISOSGD:S000003432GO_REF:00000246
GO:0005829cytosolIDAPMID:168233722317
GO:0005634nucleusIDAPMID:168233722730
Fission Yeast Phenotype Ontology

Population Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0002060viable vegetative cell populationMicroscopyelp2ΔNullPECO:0000005, PECO:0000137PMID:236978063755
Microscopyelp2ΔNullPMID:20473289

Cell Phenotype

Term IDTerm NameEvidenceAlleleExpressionConditionReferenceCount
FYPO:0000059abnormal mitotic cell cycleMicroscopyelp2ΔNullPECO:0000005, PECO:0000137PMID:23697806564
FYPO:0001492viable elongated vegetative cellMicroscopyelp2ΔNullPECO:0000005, PECO:0000137PMID:23697806170
penetrance FYPO_EXT:0000001
Transcript
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
110084481008589
210086691010498
310105411011121

UTRs

Region Start End Reference
three_prime_UTR10108771011121PMID:21511999
five_prime_UTR10084481008472PMID:21511999
Protein Features

Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID Database InterPro Description Start End Count
PF00400 Pfam IPR001680 WD40 repeat 182 222 104
PF00400 Pfam IPR001680 WD40 repeat 568 604 104
PF00400 Pfam IPR001680 WD40 repeat 364 397 104
PF00400 Pfam IPR001680 WD40 repeat 264 296 104
PF00400 Pfam IPR001680 WD40 repeat 619 654 104
PF00400 Pfam IPR001680 WD40 repeat 48 83 104
SM00320 SMART IPR001680 WD40 repeat 180 222 121
SM00320 SMART IPR001680 WD40 repeat 89 125 121
SM00320 SMART IPR001680 WD40 repeat 257 296 121
SM00320 SMART IPR001680 WD40 repeat 359 398 121
SM00320 SMART IPR001680 WD40 repeat 567 606 121
SM00320 SMART IPR001680 WD40 repeat 613 654 121
SM00320 SMART IPR001680 WD40 repeat 39 84 121
SM00320 SMART IPR001680 WD40 repeat 660 702 121
SM00320 SMART IPR001680 WD40 repeat 520 564 121
SM00320 SMART IPR001680 WD40 repeat 315 354 121
PS50082 Prosite Profiles IPR001680 WD40 repeat 264 296 100
PS50082 Prosite Profiles IPR001680 WD40 repeat 574 602 100
PS50082 Prosite Profiles IPR001680 WD40 repeat 187 224 100
PS50082 Prosite Profiles IPR001680 WD40 repeat 620 663 100
PS50082 Prosite Profiles IPR001680 WD40 repeat 366 397 100
PS50294 Prosite Profiles IPR017986 WD40-repeat-containing domain 574 711 104
PS50294 Prosite Profiles IPR017986 WD40-repeat-containing domain 187 397 104
PS00678 Prosite Patterns IPR019775 WD40 repeat, conserved site 209 223 65
PTHR13729:SF2 HMMPANTHER 1 759 1
PTHR13729 HMMPANTHER 1 759 1
G3DSA:2.130.10.10 Gene3D IPR015943 523 758 143
G3DSA:2.130.10.10 Gene3D IPR015943 45 167 143
G3DSA:2.130.10.10 Gene3D IPR015943 257 446 143
G3DSA:2.130.10.10 Gene3D IPR015943 168 224 143
SSF50978 SuperFamily IPR017986 41 354 135
SSF50998 SuperFamily IPR011047 529 714 7
SSF50998 SuperFamily IPR011047 263 403 7
Low complexity (SEG) seg 102 116
Low complexity (SEG) seg 202 213
Low complexity (SEG) seg 314 328
PR00320 PRINTS IPR020472 G-protein beta WD-40 repeat 641 655 43
PR00320 PRINTS IPR020472 G-protein beta WD-40 repeat 71 85 43
PR00320 PRINTS IPR020472 G-protein beta WD-40 repeat 209 223 43

View domain organization at Pfam

Manually Curated Family or Sub-families

Term IDTerm NameReferenceCount
PBO:0000190WD repeat proteinTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000190

Protein Properties

Ave. residue weight 111.78 Da
Charge -1.50
Isoelectric point 6.38
Molecular weight 84.95 kDa
Number of residues 760
Sequence
Gene Expression

Quantitative Gene Expression

Protein Level

Molecules/Cell (average)DuringConditionScaleEvidenceReference
NDduring cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127
population_wideexperimental evidencePMID:23101633
9649.2during GO:0072690PECO:0000005,
PECO:0000014
population_wideexperimental evidencePMID:23101633

RNA Level

Molecules/Cell (average)DuringConditionScaleEvidenceReference
3.7during GO:0072690PECO:0000005,
PECO:0000014
population_wideexperimental evidencePMID:23101633
1during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127
population_wideexperimental evidencePMID:23101633
Species Distribution
DescriptionQualifierReferenceCount
predominantly single copy (one to one)3080
conserved in fungi4564
conserved in eukaryotes4482
conserved in metazoa3419
conserved in vertebrates3394
conserved in eukaryotes only2485
Orthologs

Manually curated orthologous groups

SpeciesGeneDescriptionLinksCount

Orthologs in Compara


Genetic Interactions

Source: BioGRID

Gene Product Evidence Reference
SPAC27E2.02IMPACT homolog, translational regulator (predicted) Negative GeneticPMID:22681890
pnk1DNA kinase/phosphatase Pnk1 Negative GeneticPMID:18818364
hob3BAR adaptor protein Hob3 Negative GeneticPMID:22681890
rps110240S ribosomal protein S11 (predicted) Positive GeneticPMID:22681890
SPAC5H10.09c3-methyl-2-oxobutanoatehydroxymethyltransferase (predicted) Negative GeneticPMID:22681890
rpp20160S acidic ribosomal protein A2 Positive GeneticPMID:22681890
SPBC3B8.08Sjogren's syndrome/scleroderma autoantigen 1 family (predicted) Negative GeneticPMID:22681890
SPBC3B8.05diphthamide biosynthesis protein Dph1 (predicted) Positive GeneticPMID:22681890
rps180140S ribosomal protein S18 (predicted) Positive GeneticPMID:22681890
sgo2inner centromere protein, shugoshin Sgo2 Negative GeneticPMID:18818364
trm1tRNA (guanine-N2-)-methyltransferase Negative GeneticPMID:22681890
SPAC3G9.11cpyruvate decarboxylase (predicted) Positive GeneticPMID:22681890
SPBC3E7.07cDUF757 family protein Negative GeneticPMID:22681890
SPAC9.07cGTPase Rbg1 (predicted) Negative GeneticPMID:22681890
mga2IPT/TIG ankyrin repeat containing transcription regulator of fatty acid biosynthesis (predicted) Positive GeneticPMID:22681890
SPAC29A4.02ctranslation elongation factor EF-1 gamma subunit Negative GeneticPMID:22681890
mug80cyclin Clg1 (predicted) Positive GeneticPMID:22681890
SPBC1652.01ribosomal RNA processing element (RRPE)-binding protein (predicted) Positive GeneticPMID:22681890
SPAC56F8.02AMP binding enzyme (predicted) Negative GeneticPMID:22681890
msy2MS ion channel protein 2 (predicted) Positive GeneticPMID:22681890
SPAC23A1.17WIP family cytoskeletal protein (predicted) Negative GeneticPMID:22681890
rpt419S proteasome regulatory subunit Rpt4 (predicted) Negative GeneticPMID:22681890
swd1Set1C complex subunit Swd1 Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
not3CCR4-Not complex subunit Not3/5 (predicted) Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
SPCC663.09cshort chain dehydrogenase (predicted) Negative GeneticPMID:22681890
dbr1RNA lariat debranching enzyme Dbr1 Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
SPAPB21F2.02Dopey family protein (predicted) Positive GeneticPMID:22681890
lys2homoaconitate hydratase Lys2 Negative GeneticPMID:22681890
SPCC663.15cconserved fungal protein Negative GeneticPMID:22681890
rds1conserved fungal protein Positive GeneticPMID:22681890
SPAC29E6.09sequence orphan Negative GeneticPMID:22681890
snf5SWI/SNF complex subunit Snf5 Negative GeneticPMID:18818364
SPBC1604.12sequence orphan Negative GeneticPMID:22681890
SPBC1921.04cdubious Positive GeneticPMID:22681890
gyp1GTPase activating protein Gyp1 (predicted) Negative GeneticPMID:22681890
mug176BRCT domain protein Negative GeneticPMID:22681890
SPBC25B2.08sequence orphan Positive GeneticPMID:22681890
rpl370260S ribosomal protein L37 (predicted) Positive GeneticPMID:22681890
sgf73SAGA complex subunit Sgf73 Positive GeneticPMID:22681890
dph6diphthamide synthetase Dph6 (predicted) Positive GeneticPMID:22681890
SPAC2G11.10cthiosulfate sulfurtransferase, URM1 activating enzyme (predicted) Positive GeneticPMID:22681890
msa1RNA-binding protein Msa1 Positive GeneticPMID:22681890
dad2DASH complex subunit Dad2 Positive GeneticPMID:18818364
rap1telomere binding protein Rap1 Negative GeneticPMID:18818364
tma23ribosome biogenesis protein Tma23 (predicted) Positive GeneticPMID:22681890
rrp16rRNA processing protein Rrp16 (predicted) Positive GeneticPMID:22681890
rpl250260S ribosomal protein L25 (predicted) Positive GeneticPMID:22681890
idp1isocitrate dehydrogenase Idp1 (predicted) Negative GeneticPMID:22681890
SPBC2A9.02NAD dependent epimerase/dehydratase family protein Positive GeneticPMID:22681890
SPAC977.02S. pombe specific 5Tm protein family Positive GeneticPMID:22681890
SPBC28E12.04sequence orphan Negative GeneticPMID:22681890
pop2F-box/WD repeat protein Pop2 Negative GeneticPMID:22681890
rtf2replication termination factor Rtf2 Negative GeneticPMID:22681890
SPBP8B7.10cU3 snoRNP-associated protein Utp16 (predicted) Positive GeneticPMID:22681890
swc2Swr1 complex complex subunit Swc2 Positive GeneticPMID:22681890
SPAC9G1.05actin cortical patch component Aip1 (predicted) Negative GeneticPMID:22681890
SPBP16F5.05cribosome biogenesis protein Nop8 (predicted) Positive GeneticPMID:22681890
nab3poly(A) binding protein Nab3 (predicted) Positive GeneticPMID:22681890
SPBC8D2.17alpha-1,2-galactosyltransferase (predicted) Positive GeneticPMID:22681890
vps38phophatidylinositol 3-kinase complex subunit Vps38 Positive GeneticPMID:22681890
nse6Smc5-6 complex non-SMC subunit Nse6 Positive GeneticPMID:22681890
SPCC1840.09NAD dependent epimerase/dehydratase family protein Negative GeneticPMID:22681890
emc1ER membrane protein complex subunit Emc1 (predicted) Positive GeneticPMID:22681890
fkbp39FKBP-type peptidyl-prolyl cis-trans isomerase (predicted) Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
rpl410160S ribosomal protein L41 Positive GeneticPMID:22681890
pmt1tRNA methyltransferase Positive GeneticPMID:22681890
swi6HP1 family chromodomain protein Swi6 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
rpl170260S ribosomal protein L17 (predicted) Positive GeneticPMID:22681890
eme1Holliday junction resolvase subunit Eme1 Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
leo1RNA polymerase II associated Paf1 complex (predicted) Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
nap1nucleosome assembly protein Nap1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
prz1calcineurin responsive transcription factor Prz1 Positive GeneticPMID:22681890
SPBC4B4.04translation initiation factor eIF2A (predicted) Positive GeneticPMID:22681890
rps00140S ribosomal protein S0A (p40) Positive GeneticPMID:22681890
SPCC1827.03cacetyl-CoA ligase (predicted) Negative GeneticPMID:22681890
SPBC18H10.07WW domain-binding protein 4 (predicted) Negative GeneticPMID:22681890
nup124nucleoporin Nup124 Positive GeneticPMID:22681890
pht1histone H2A variant H2A.Z, Pht1 Negative GeneticPMID:18818364
SPBC16A3.16mitochondrial inner membrane protein involved in cytochrome c oxidase assembly Pet191 (predicted) Positive GeneticPMID:22681890
SPAC3H8.04chromosome segregation protein (predicted) Positive GeneticPMID:22681890
SPAC824.09cGTPase activating protein (predicted) Negative GeneticPMID:22681890
SPBC14C8.15triglyceride lipase-cholesterol esterase (predicted) Negative GeneticPMID:22681890
sec63ER protein translocation subcomplex subunit Sec63 (predicted) Negative GeneticPMID:22681890
SPCC584.11cSvf1 family protein Svf1 Positive GeneticPMID:22681890
exo70exocyst complex subunit Exo70 Negative GeneticPMID:22681890
rpl160160S ribosomal protein L13/L16 (predicted) Positive GeneticPMID:22681890
mug14adducin Negative GeneticPMID:22681890
gpa2heterotrimeric G protein alpha-2 subunit Gpa2 Positive GeneticPMID:22681890
caf1CCR4-Not complex CAF1 family ribonuclease subunit Caf1 Positive GeneticPMID:18818364
pit1serine/threonine protein kinase, meiotic Pit1 Negative GeneticPMID:22681890
SPAC1F3.03Lgl family protein (predicted) Negative GeneticPMID:22681890
SPAC11H11.03cSMR and DUF1771 domain protein (predicted) Negative GeneticPMID:22681890
SPAC1F5.05cconserved fungal protein Negative GeneticPMID:22681890
SPBC1198.08dipeptidase Dug1 (predicted) Negative GeneticPMID:22681890
SPAC10F6.04RCC domain protein Ats1 (predicted) Positive GeneticPMID:22681890
SPAC22H10.09sequence orphan Negative GeneticPMID:22681890
rps170140S ribosomal protein S17 (predicted) Positive GeneticPMID:22681890
SPCC1840.05cphosphoglucomutase (predicted) Negative GeneticPMID:22681890
SPAC139.01cnuclease, XP-G family (predicted) Positive GeneticPMID:22681890
SPAC30C2.04cofactor for methionyl-and glutamyl-tRNA synthetases (predicted) Positive GeneticPMID:22681890
ath1ataxin-2 homolog Positive GeneticPMID:22681890
leu32-isopropylmalate synthase Leu3 Positive GeneticPMID:22681890
zds1zds family protein phosphatase type A regulator Zds1 (predicted) Negative GeneticPMID:18818364
SPAC227.05prefoldin subunit 4 (predicted) Positive GeneticPMID:22681890
SPAC227.06Rab GTPase binding (predicted) Negative GeneticPMID:22681890
SPBC16C6.03cribosome assembly protein (predicted) Positive GeneticPMID:22681890
trx2mitochondrial thioredoxin Trx2 Negative GeneticPMID:22681890
pgt1glutathione transporter Pgt1 Positive GeneticPMID:22681890
SPAC3A12.13ctranslation initiation factor eIF3j (p35) Positive GeneticPMID:22681890
raf2Rik1-associated factor Raf2 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
SPBC17A3.06phosphoprotein phosphatase (predicted) Positive GeneticPMID:22681890
elp1elongator subunit Elp1 (predicted) Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
SPAC637.06alpha-1,2-galactosyltransferase (predicted) Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
gar2nucleolar protein required for rRNA processing Positive GeneticPMID:22681890
myo51myosin type V Negative GeneticPMID:22681890
upf1ATP-dependent RNA helicase Upf1 Positive GeneticPMID:22681890
tma20RNA-binding protein Tma20 (predicted) Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
rav2RAVE complex subunit Rav2 Negative GeneticPMID:22681890
elp6elongator complex subunit Elp6 (predicted) Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
mgr2mitochondrial membrane protein Mgr2 (predicted) Negative GeneticPMID:22681890
pli1SUMO E3 ligase Pli1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
SPBC1683.03cmembrane transporter (predicted) Positive GeneticPMID:22681890
cph1Clr6 histone deacetylase associated PHD protein-1 Cph1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
SPBC1604.03cconserved fungal protein Negative GeneticPMID:22681890
pom2DYRK family protein kinase Pom2 Negative GeneticPMID:22681890
spo20sec14 cytosolic factor family Sec14 Negative GeneticPMID:22681890
SPBC31F10.10czf-MYND type zinc finger protein Negative GeneticPMID:18818364
elp3elongator complex, histone acetyltransferase subunit Elp3 (predicted) Positive GeneticPMID:18818364
clr1cryptic loci regulator Clr1 Negative GeneticPMID:22681890
SPAC30D11.11Haemolysin-III family protein (predicted) Positive GeneticPMID:22681890
cgs2cAMP-specific phosphodiesterase Cgs2 Positive GeneticPMID:22681890
atp11F1-ATPase chaperone Atp11 (predicted) Negative GeneticPMID:22681890
ubp8SAGA complex ubiquitin C-terminal hydrolase Ubp8 Positive GeneticPMID:18818364
pfl3cell surface glycoprotein (predicted), DIPSY family Positive GeneticPMID:22681890
fft3SMARCAD1 family ATP-dependent DNA helicase Fft3 Negative GeneticPMID:18818364
rox3mediator complex subunit Med19/Rox3 Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
sif3Sad1 interacting factor Sif3 (predicted) Positive GeneticPMID:22681890
bdf2BET family double bromodomain protein Bdf2 Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
mak10NatC N-acetyltransferase complex subunit Mak10 (predicted) Positive GeneticPMID:22681890
pub3HECT-type ubiquitin-protein ligase Pub3 (predicted) Positive GeneticPMID:18818364
sck2serine/threonine protein kinase Sck2 Negative GeneticPMID:22681890
rps280240S ribosomal protein S28, Rps2802 Positive GeneticPMID:22681890
rps250240S ribosomal protein S25 (predicted) Positive GeneticPMID:22681890
cid1poly(A) polymerase Cid1 Positive GeneticPMID:22681890
SPAC1399.02membrane transporter (predicted) Negative GeneticPMID:22681890
SPAC644.13cRab GTPase binding (predicted) Negative GeneticPMID:22681890
fma1methionine aminopeptidase Fma1 (predicted) Positive GeneticPMID:22681890
ser2phosphoserine phosphatase Ser2 (predicted) Negative GeneticPMID:18818364
SPAC6G9.15csequence orphan Negative GeneticPMID:22681890
SPAC6G9.14RNA-binding protein (predicted) Positive GeneticPMID:22681890
fis1mitochondrial fission protein Fis1 (predicted) Negative GeneticPMID:22681890
SPAC24C9.12cglycine hydroxymethyltransferase (predicted) Positive GeneticPMID:22681890
rpl240160S ribosomal protein L24 (predicted) Positive GeneticPMID:22681890
saf5splicing factor Negative GeneticPMID:22681890
SPAC12G12.07cconserved fungal protein Negative GeneticPMID:22681890
trp663TRP-like ion channel (predicted) Positive GeneticPMID:22681890
lag1sphingosine N-acyltransferase Lag1 Positive GeneticPMID:22681890
SPAC3H5.08cWD repeat protein, human WDR44 family Negative GeneticPMID:22681890
SPAC13G6.09SSU-rRNA maturation protein Tsr4 homolog 2 (predicted) Positive GeneticPMID:22681890
rqc1ribosome quality control complex (RQC) complex subunit Rqc1 (predicted) Negative GeneticPMID:22681890
SPAC25B8.05tRNA-pseudouridine synthase (predicted) Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
SPAC977.05cconserved fungal family Positive GeneticPMID:22681890
SPAC1A6.01chuman thyroid receptor interacting protein homolog, transcription coactivator (predicted) Negative GeneticPMID:22681890
pac10prefoldin subunit 3 Pac10 (predicted) Positive GeneticPMID:22681890
SPBC83.17transcriptional coactivator, multiprotein bridging factor Mbf1 (predicted) Positive GeneticPMID:22681890
SPAC977.11CRCB domain protein Negative GeneticPMID:22681890
ryh1GTPase Ryh1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
wos2p23 homolog, predicted co-chaperone Wos2 Negative GeneticPMID:22681890
sdh4TIM22 inner membrane protein import complex anchor subunit Tim18 Positive GeneticPMID:18818364
SPBC83.05mitochondrial RNA-binding protein (predicted) Negative GeneticPMID:22681890
SPBC1861.07elongin C (predicted) Negative GeneticPMID:18818364
dcd1deoxycytidylate deaminase (predicted) Positive GeneticPMID:22681890
tef101translation elongation factor EF-1 alpha Ef1a-a Negative GeneticPMID:22681890
dph2diphthamide biosynthesis protein (predicted) Positive GeneticPMID:22681890
wtf21wtf element Wtf21 Positive GeneticPMID:22681890
arp8actin-like protein, Ino80 complex subunit Arp8 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
pzh1serine/threonine protein phosphatase Pzh1 Negative GeneticPMID:22681890
snz1pyridoxine biosynthesis protein Positive GeneticPMID:22681890
SPAC1B3.08COP9 signalosome complex subunit 12 (predicted) Positive GeneticPMID:22681890
clr4histone H3 lysine methyltransferase Clr4 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
SPCC594.04csteroid oxidoreductase superfamily protein (predicted) Negative GeneticPMID:22681890
SPAC18B11.09cserine O-acetyltransferase activity (predicted) Negative GeneticPMID:22681890
rpl300160S ribosomal protein L30 (predicted) Positive GeneticPMID:22681890
ftp105Ubp5 interacting protein Ftp105 Negative GeneticPMID:22681890
fmt1methionyl-tRNA formyltransferase Fmt1 (predicted) Positive GeneticPMID:22681890
pmr1P-type ATPase, calcium transporting Pmr1 Positive GeneticPMID:22681890
SPAC222.14cGTP binding protein Sey1 (predicted) Positive GeneticPMID:22681890
vps1dynamin family protein Vps1 Positive GeneticPMID:22681890
pmt3SUMO Negative GeneticPMID:22681890
meu23S. pombe specific protein Negative GeneticPMID:22681890
acp2F-actin capping protein beta subunit Acp2 Negative GeneticPMID:22681890
SPAC4F10.16cP-type ATPase (predicted) Positive GeneticPMID:22681890
seh1Seh1-associated complex subunity Seh1 Negative GeneticPMID:22681890
SPAC9.02cpolyamine N-acetyltransferase (predicted) Positive GeneticPMID:22681890
ste20Rictor homolog, Ste20 Negative GeneticPMID:22681890
arg11N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase Negative GeneticPMID:22681890
akr1palmitoyltransferase Akr1 (predicted) Negative GeneticPMID:22681890
nup60nucleoporin Nup60 Negative GeneticPMID:18818364
hri2eIF2 alpha kinase Hri2 Negative GeneticPMID:22681890
SPBC725.01aspartate aminotransferase (predicted) Negative GeneticPMID:22681890
rpl70260S ribosomal protein L7 Positive GeneticPMID:22681890
SPAC9G1.07sequence orphan Negative GeneticPMID:22681890
ubp16ubiquitin C-terminal hydrolase Ubp16 Positive GeneticPMID:22681890
SPAPB8E5.04cNiemann-Pick disease type C2 protein hE1 homolog (predicted) Positive GeneticPMID:22681890
SPCC4F11.03csequence orphan Negative GeneticPMID:22681890
gcn5SAGA complex histone acetyltransferase catalytic subunit Gcn5 Positive GeneticPMID:18818364
rps10140S ribosomal protein S3a Positive GeneticPMID:22681890
not2CCR4-Not complex subunit Not2 (predicted) Positive GeneticPMID:18818364
ppr5mitochondrial PPR repeat protein Ppr5 Positive GeneticPMID:22681890
alg10dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase Alg10 (predicted) Positive GeneticPMID:22681890
sat1Golgi membrane exchange factor subunit Sat1 (predicted) Negative GeneticPMID:22681890
hos2histone deacetylase (class I) Hos2 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
pmc2mediator complex subunit Pmc2/Med1 Positive GeneticPMID:18818364
ssr3SWI/SNF and RSC complex subunit Ssr3 Positive GeneticPMID:22681890
SPBC31F10.02acyl-CoA hydrolase (predicted) Negative GeneticPMID:22681890
bis1stress response protein Bis1 Negative GeneticPMID:22681890
erg5C-22 sterol desaturase Erg5 Negative GeneticPMID:22681890
SPAC1952.10cconserved fungal protein Negative GeneticPMID:22681890
rpl240260S ribosomal protein L24 (predicted) Positive GeneticPMID:22681890
arp42SWI/SNF and RSC complex subunit Arp42 Negative GeneticPMID:18818364
ymr1phosphatidylinositol-3-phosphatase, myotubularin family (predicted) Positive GeneticPMID:18818364
rsc1RSC complex subunit Rsc1 Negative GeneticPMID:18818364
rad1checkpoint clamp complex protein Rad1 Positive GeneticPMID:22681890
rpl280160S ribosomal protein L27/L28 Positive GeneticPMID:22681890
SPBC25H2.15SSU-rRNA maturation protein Tsr4 homolog 1 (predicted) Positive GeneticPMID:22681890
ppr8mitochondrial PPR repeat protein Ppr8 Negative GeneticPMID:22681890
erp2COPII-coated vesicle component Erp2/3/4 (predicted) Positive GeneticPMID:22681890
omh6alpha-1,2-mannosyltransferase Omh6 (predicted) Negative GeneticPMID:22681890
rps100140S ribosomal protein S10 (predicted) Positive GeneticPMID:22681890
SPBC365.16conserved protein Negative GeneticPMID:22681890
tos4FHA domain protein Tos4 (predicted) Negative GeneticPMID:22681890
apm3AP-3 adaptor complex subunit Apm3 (predicted) Negative GeneticPMID:22681890
reb1RNA polymerase I transcription termination factor Reb1 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
SPCC320.03transcription factor (predicted) Negative GeneticPMID:22681890
rpl90160S ribosomal protein L9 Positive GeneticPMID:22681890
SPBC1734.07cTRAPP complex subunit Trs85 (predicted) Negative GeneticPMID:18818364
sds23PP2A-type phosphatase inhibitor Sds23/Moc1 Negative GeneticPMID:22681890
gal1galactokinase Gal1 Positive GeneticPMID:22681890
yox1MBF complex corepressor Yox1 Negative GeneticPMID:22681890
sgf29SAGA complex subunit Sgf29 Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
SPAC1805.16cpurine nucleoside phosphorylase (predicted) Negative GeneticPMID:22681890
snr13-hydroxyisobutyryl-CoA hydrolase snr1 Negative GeneticPMID:22681890
SPAC3A11.13prefoldin subunit 6 (predicted) Positive GeneticPMID:18818364
rad13DNA repair nuclease Rad13 Negative GeneticPMID:22681890
pub1HECT-type ubiquitin-protein ligase E3 Pub1 Negative GeneticPMID:22681890
pho24-nitrophenylphosphatase Negative GeneticPMID:22681890
hhp2serine/threonine protein kinase Hhp2 Negative GeneticPMID:22681890
SPAC222.08cglutamine aminotransferase subunit (predicted) Positive GeneticPMID:22681890
ell1RNA polymerase II transcription elongation factor SpELL Negative GeneticPMID:22681890
vps20ESCRT III complex subunit Vps20 Positive GeneticPMID:22681890
SPAC2F7.17mitochondrial peptide chain release factor (predicted) Negative GeneticPMID:22681890
cbp1CENP-B homolog Positive GeneticPMID:18818364
scs7sphingosine hydroxylase Scs7 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
shk2PAK-related kinase Shk2 Negative GeneticPMID:18818364
nup37WD repeat protein, nucleoporin Nup37 Positive GeneticPMID:18818364
rps2340S ribosomal protein S23 (predicted) Positive GeneticPMID:22681890
SPAC7D4.12cDUF1212 family protein Negative GeneticPMID:22681890
msn5karyopherin (predicted) Negative GeneticPMID:18818364
cyp4cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp4 (predicted) Positive GeneticPMID:22681890
set3histone lysine methyltransferase Set3 Negative GeneticPMID:22681890
spo12Spo12 family protein Positive GeneticPMID:22681890
ubp3ubiquitin C-terminal hydrolase Ubp3 Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
SPAC2F3.11exopolyphosphatase (predicted) Negative GeneticPMID:22681890
mad1mitotic spindle checkpoint protein Mad1 Positive GeneticPMID:22681890
nop52nucleolar protein Nop52 family (predicted) Positive GeneticPMID:22681890
hrp1ATP-dependent DNA helicase Hrp1 Negative GeneticPMID:18818364
gls2glucosidase II Gls2 Positive GeneticPMID:22681890
rpl230160S ribosomal protein L23 Positive GeneticPMID:22681890
hat1histone acetyltransferase Hat1 Negative GeneticPMID:22681890
are2acyl-coA-sterol acyltransferase Are2 (predicted) Negative GeneticPMID:22681890
rps40340S ribosomal protein S4 (predicted) Positive GeneticPMID:22681890
arf6ADP-ribosylation factor, Arf family Arf6 Negative GeneticPMID:22681890
erd1Erd1 homolog (predicted) Positive GeneticPMID:22681890
ght1hexose transporter Ght1 Positive GeneticPMID:22681890
rsc4RSC complex subunit Rsc4 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
SPBC947.15cmitochondrial NADH dehydrogenase (predicted) Positive GeneticPMID:22681890
nem1Nem1-Spo7 phosphatase complex catalytic subunit Nem1 (predicted) Negative GeneticPMID:22681890
clr3histone deacetylase (class II) Clr3 Negative GeneticPMID:18818364
Negative GeneticPMID:22681890
vph2endoplasmic reticulum membrane protein involved in assembly of the V-ATPase (predicted) Negative GeneticPMID:18818364
SPBC947.06cspermidine family transporter (predicted) Positive GeneticPMID:22681890
SPAC3F10.091-(5-phosphoribosyl)-5-Negative GeneticPMID:22681890
mug154conserved fungal protein Negative GeneticPMID:22681890
mis4adherin, cohesin loading factor Mis4 Negative GeneticPMID:23050226
SPCC1442.11csequence orphan Positive GeneticPMID:22681890
SPAPB8E5.10conserved fungal protein, with meiosis specific splicing Positive GeneticPMID:22681890
swr1SNF2 family helicase Swr1 Positive GeneticPMID:18818364
mto1MT organizer Mto1 Negative GeneticPMID:22681890
nto1histone acetyltransferase complex subunit Nto1 (predicted) Positive GeneticPMID:18818364
raf1Rik1-associated factor Raf1 Negative GeneticPMID:22681890
rps40140S ribosomal protein S4 (predicted) Positive GeneticPMID:22681890
gpd3glyceraldehyde 3-phosphate dehydrogenase Gpd3 Positive GeneticPMID:22681890
acp1F-actin capping protein alpha subunit Negative GeneticPMID:22681890
dsk1SR protein-specific kinase Dsk1 Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
SPAP27G11.02TPR repeat protein, involved in mitochondrial protein turnover (predicted) Negative GeneticPMID:22681890
atp10F1-F0 ATPase assembly protein (predicted) Negative GeneticPMID:22681890
SPBC29A3.09cAAA family ATPase Gcn20 (predicted) Positive GeneticPMID:18818364
rsv2transcription factor Rsv2 Positive GeneticPMID:18818364
tom70mitochondrial TOM complex subunit Tom70 (predicted) Positive GeneticPMID:22681890
mug129sequence orphan Negative GeneticPMID:22681890
SPAC8E11.01cbeta-fructofuranosidase (predicted) Negative GeneticPMID:22681890
SPCC1494.08cconserved fungal protein Negative GeneticPMID:22681890
SPCC1919.05Ski complex TPR repeat subunit Ski3 (predicted) Positive GeneticPMID:18818364
Positive GeneticPMID:22681890
ngg1SAGA complex subunit Ngg1 Positive GeneticPMID:18818364
rpl190260S ribosomal protein L19 Positive GeneticPMID:22681890
SPBC365.07cTATA element modulatory factor homolog (predicted) Negative GeneticPMID:22681890
atp12F1-ATPase chaperone Atp12 (predicted) Negative GeneticPMID:22681890
rps190240S ribosomal protein S19 (predicted) Positive GeneticPMID:22681890
SPAC694.02DEAD/DEAH box helicase Positive GeneticPMID:22681890
rps40240S ribosomal protein S4 (predicted) Positive GeneticPMID:22681890
dph3diphthamide biosynthesis protein Dph3 (predicted) Positive GeneticPMID:22681890
trm112protein and tRNA methyltransferase regulatory subunit Trm112 (predicted) Positive GeneticPMID:22681890
hmt2sulfide-quinone oxidoreductase Negative GeneticPMID:22681890
mre11Mre11 nuclease Positive GeneticPMID:18818364
rpl210260S ribosomal protein L21 (predicted) Positive GeneticPMID:22681890
pfa3palmitoyltransferase Pfa3 (predicted) Positive GeneticPMID:22681890
rps120240S ribosomal protein S12 (predicted) Positive GeneticPMID:22681890
alg5dolichyl-phosphate beta-glucosyltransferase Alg5 (predicted) Positive GeneticPMID:22681890
SPBP35G2.14RNA-binding protein Positive GeneticPMID:22681890
rps160240S ribosomal protein S16 (predicted) Positive GeneticPMID:22681890
arg7argininosuccinate lyase Negative GeneticPMID:22681890
dsc4Golgi Dsc E3 ligase complex subunit Dsc3 Positive GeneticPMID:22681890
ely5nuclear pore protein Ely5 Positive GeneticPMID:22681890
nsk1Clp1-interacting protein Nsk1 Positive GeneticPMID:22681890
ies4Ino80 complex subunit Ies4 Negative GeneticPMID:22681890
psk1serine/threonine protein kinase Psk1 Negative GeneticPMID:22681890
SPBC29A10.16ccytochrome b5 (predicted) Negative GeneticPMID:22681890
alg6glucosyltransferase Alg6 Positive GeneticPMID:22681890
SPAC10F6.13caspartate aminotransferase (predicted) Positive GeneticPMID:22681890
nfs1mitochondrial cysteine desulfurase Nfs1 (predicted) Negative GeneticPMID:22681890
ckb2CK2 family regulatory subunit (predicted) Positive GeneticPMID:22681890
rex3exonuclease Rex3 (predicted) Positive GeneticPMID:22681890
SPBC19F8.02nuclear distribution protein NUDC homolog Negative GeneticPMID:22681890
Physical Interactions

Source: BioGRID

Gene Product Evidence Reference
hhp1serine/threonine protein kinase Hhp1 Affinity Capture-MSPMID:24055157
ekc1protein phosphatase regulatory subunit Ekc1 (predicted) Affinity Capture-MSPMID:19371376
External References
Database Identifier Description
NBRP SPCC895.06 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPCC895.06 Retrieval of eukaryotic orthologs (Bähler Lab)
BioGrid SPCC895.06 BioGRID Interaction Datasets
Expression Viewer SPCC895.06 Cell Cycle Expression Profile (Bähler Lab)
Expression Viewer SPCC895.06 Meiosis/Sporulation Expression Profies (Bähler Lab)
Expression Viewer SPCC895.06 Pheromone response/mating expression profiles (Bähler Lab)
Expression Viewer SPCC895.06 Environmental stress expression profiles (Bähler Lab)
Pomb(A) SPCC895.06 Polyadenylation Viewer (Gullerova lab)
pombeTV SPCC895.06 Transcriptome Viewer (Bähler Lab)
Cyclebase SPCC895.06 Cell Cycle Data
GEO SPCC895.06 GEO profiles
PInt SPCC895.06 Protein-Protein Interaction Predictor (Bähler Lab)
SPD / RIKEN28/28F05Orfeome Localization Data
EntrezGene2538986elongator complex subunit Elp2 (predicted)
WikiGene2538986elongator complex subunit Elp2 (predicted)
UniProtKB/SwissProtO94533Elongator complex protein 2
ModBaseO94533Database of comparative protein structure models
StringO94533Network display of known and predicted interactions and functional associations
RefSeq PeptideNP_588047elongator complex subunit Elp2 (predicted)
RefSeq mRNANM_001023039972h- elongator complex subunit Elp2 (predicted) (SPCC895.06), mRNA
European Nucleotide ArchiveCAA22842ENA Protein Mapping
UniParcUPI000006C1EFUniProt Archive

Literature for elp2

Search: Europe PMC or PubMed

Release Version: PomBase:21_41 - 24 Feb 2014