mug170 (SPCP1E11.03)

Gene Standard Namemug170 ChromosomeIII
Systematic IDSPCP1E11.03 Gene Start2394675
Synonyms Gene End2396196
Productarrestin Gene Length1522
Feature Typeprotein coding CDS Start2394675
Name Description CDS End2396096
Characterisation Statussequence_orphan CDS Length1422

Ensembl Gene Location
  1. SPNCRNA.1294
  2. SPCC1827.07c
  3. prl40
  4. ppk38
  5. mug170
  6. pal1
  7. are2
  8. apl4
Fission Yeast Phenotype Ontology

Ontology Graph

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Term IDTerm NameEvidenceAlleleAllele TypeExpressionConditionReference
FYPO:0002060viable vegetative cell populationMicroscopymug170delta (deletion)deletionPMID:20473289
GO Molecular Function

Ontology Graph

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Term IDTerm NameEvidenceWith/FromReference
GO:0005509calcium ion bindingISMIPR011022GO_REF:0000001
GO Cellular Component

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Term IDTerm NameEvidenceWith/FromReference
GO:0005634nucleusIDAPMID:16823372
GO:0005737cytoplasmIDAPMID:16823372
GO:0032153cell division siteIDAPMID:16823372
GO:0051286cell tipIDAPMID:16823372
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
123946752395324
223953632395612
323956712396002
423960482396196

References

Region Start End Reference
three_prime_UTR23960972396196PMID:18641648
three_prime_UTR23960972396196PMID:18641648
three_prime_UTR23960972396196PMID:20118936
three_prime_UTR23960972396196PMID:20118936
Protein Features
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Graphical View

Ensembl protein image with mapped locations of structural domains

Protein Families and Domains

Feature ID InterPro Database Description Start End All Genes
PF02752 IPR011022 Pfam Arrestin C-terminal-like domain 268 425 7
SM01017 IPR011022 SMART Arrestin C-terminal-like domain 266 426 7
SSF81296 IPR014756 SuperFamily 271 423 14

View domain organization at Pfam

Manually Curated Family or Sub-families

Term IDTerm NameReferenceAll Genes
PBO:0000342arrestin familyTemporary processing gif - replaced by AJAX with count of genes annotated with the term PBO:0000342

Protein Properties

Ave. residue weight 113.57 Da
Charge 16.00
Isoelectric point 8.66
Molecular weight 48.38 kDa
Number of residues 426
Sequence
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Gene Expression
DescriptionEvidenceDuringConditionRangeAverage per CellReference
protein levelexperimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127		population_widePMID:23101633
experimental evidencesingle-celled organism vegetative growth phasePECO:0000005,
PECO:0000014		population_widePMID:23101633
RNA levelexperimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000127,
PECO:0000014,
PECO:0000005		population_wide0.35PMID:23101633
experimental evidencesingle-celled organism vegetative growth phasePECO:0000014,
PECO:0000005		population_wide0.71PMID:23101633
Species Distribution
DescriptionQualifierReference
sequence orphan
sequence orphan, uncharacterised
conserved in Schizosaccharomyces only
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Genetic Interactions

Source: BioGRID

Gene Product Evidence Reference
dsc2Golgi Dsc E3 ligase complex subunit Dsc2 Negative GeneticPMID:21504829
SPBC4B4.04translation initiation factor eIF2A (predicted) Negative GeneticPMID:22681890
cph2Clr6 histone deacetylase associated PHD protein-2 Cph2 Negative GeneticPMID:22681890
sfp1transcription factor Sfp1 (predicted) Negative GeneticPMID:22681890
dsc3Golgi Dsc E3 ligase complex subunit Dsc3 Negative GeneticPMID:21504829
Negative GeneticPMID:22681890
set1histone lysine methyltransferase Set1 Negative GeneticPMID:22681890
dsc1Golgi Dsc E3 ligase complex subunit Dsc1 Negative GeneticPMID:21504829
srb10cyclin-dependent protein Srb mediator subunit kinase Srb10 Negative GeneticPMID:22681890
vps5retromer complex subunit Vps5 Negative GeneticPMID:22681890
top1DNA topoisomerase I Negative GeneticPMID:22681890
ccr4CCR4-Not complex subunit Ccr4 (predicted) Negative GeneticPMID:22681890
dsc4Golgi Dsc E3 ligase complex subunit Dsc3 Negative GeneticPMID:21504829
pef1Pho85/PhoA-like cyclin-dependent kinase Pef1 Negative GeneticPMID:22681890
agn1glucan endo-1,3-alpha-glucosidase Agn1 Positive GeneticPMID:22681890
spf1Set1C PHD Finger protein Spf1 Negative GeneticPMID:22681890
arp42SWI/SNF and RSC complex subunit Arp42 Negative GeneticPMID:22681890
hip4histone promoter control protein Hip4 Negative GeneticPMID:22681890
tas3RITS complex subunit 3 Negative GeneticPMID:22681890
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External References
Database Identifier Description
NBRP SPCP1E11.03 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPCP1E11.03 Retrieval of eukaryotic orthologs
BioGrid SPCP1E11.03 BioGRID Interaction Datasets
Bähler Lab SPCP1E11.03 Cell Cycle Expression Profile
Bähler Lab SPCP1E11.03 Meiosis/Sporulation Expression Profies
Bähler Lab SPCP1E11.03 Pheromone response/mating expression profiles
Bähler Lab SPCP1E11.03 Environmental stress expression profiles
Bähler Lab SPCP1E11.03 Bähler Lab Transcriptome Viewer
Cyclebase SPCP1E11.03 Cell Cycle Data
PInt SPCP1E11.03 Bähler Lab Protein-Protein Interaction Predictor
Entrez Gene SPCP1E11.03 Entrez Gene
WikiGene2539600arrestin
Uniprot_genenameMUG170
EntrezGene2539600arrestin
SPD / RIKEN23/23B05Orfeome Localization Data
UniProtKB/SwissProtQ9UU84Meiotically up-regulated gene 170 protein
ModBaseQ9UU84Database of comparative protein structure models
Pfam Protein DomainsQ9UU84Pfam Domain Arrangement
RefSeq PeptideNP_588556arrestin
RefSeq mRNANM_001023543972h- arrestin (mug170), mRNA
European Nucleotide ArchiveCAB54862ENA Protein Mapping
UniParcUPI000006B5EFUniProt Archive

Literature for mug170
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Search: UK PMC or PubMed

Release Version: PomBase:18_35 - 11 May 2013