prl1 (SPNCRNA.01)


Gene Standard Nameprl1 Characterisation Status
Systematic IDSPNCRNA.01 Feature TypencRNA
Synonymsprl01 Name Description
Productnon-coding RNA, poly(A)-bearing (predicted) Product Size1101nt
Genomic Location Chromosome I, 3003816-3004916, 1101nt

Ensembl Gene Location
Transcript
Ensembl transcript structure with UTRs, exons and introns

Transcript Structure

Region Coordinates Reference
Exons3003816..3004916
CDS3003816..3004916PMID:12597277
CDS3003816..3004916AB084813
Sequence
Gene Expression

Quantitative Gene Expression

RNA Level

Molecules/Cell (average)ExtensionConditionScaleEvidenceReference
0.8during GO:0072690PECO:0000005,
PECO:0000014
population wideexperimental evidencePMID:23101633
0.37during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127
population wideexperimental evidencePMID:23101633
Warning
DescriptionQualifierReferenceCount
no detectable long open reading frameInferred from Sequence or Structural Similarity PMID:12597277388
External References
Database Identifier Description
NBRP SPNCRNA.01 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPNCRNA.01 Retrieval of eukaryotic orthologs (Bähler Lab)
BioGrid SPNCRNA.01 BioGRID Interaction Datasets
Expression Viewer SPNCRNA.01 Cell Cycle Expression Profile (Bähler Lab)
Expression Viewer SPNCRNA.01 Meiosis/Sporulation Expression Profies (Bähler Lab)
Expression Viewer SPNCRNA.01 Pheromone response/mating expression profiles (Bähler Lab)
Expression Viewer SPNCRNA.01 Environmental stress expression profiles (Bähler Lab)
Pomb(A) SPNCRNA.01 Polyadenylation Viewer (Gullerova lab)
pombeTV SPNCRNA.01 Transcriptome Viewer (Bähler Lab)
GEO SPNCRNA.01 GEO profiles
PInt SPNCRNA.01 Protein-Protein Interaction Predictor (Bähler Lab)
PeptideAtlas SPNCRNA.01 Peptides identified in tandem mass spectrometry proteomics experiments
SYSGRO SPNCRNA.01 Fission yeast phenotypic data & analysis
Cyclebase SPNCRNA.01.1 Cell Cycle Data

Literature for prl1

Search: Europe PMC or PubMed

Release Version: PomBase:26_52 - 11 May 2015