prl13 (SPNCRNA.13)


Gene Standard Nameprl13 Characterisation Status
Systematic IDSPNCRNA.13 Feature TypencRNA
Synonyms Name Description
Productnon-coding RNA, poly(A)-bearing (predicted) Product Size425nt
Genomic Location Chromosome I, 4259795-4259371, 425nt

Ensembl Gene Location
Transcript
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
142597954259371

UTRs

Region Start End Reference
ncRNA42597954259371PMID:12597277
exon42597954259371PMID:12597277
Sequence
Gene Expression

Quantitative Gene Expression

RNA Level

Molecules/Cell (average)DuringConditionScaleEvidenceReference
0.014during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127
population_wideexperimental evidencePMID:23101633
0.069during GO:0072690PECO:0000005,
PECO:0000014
population_wideexperimental evidencePMID:23101633
Warning
DescriptionQualifierReferenceCount
no detectable long open reading frameInferred from Sequence or Structural Similarity PMID:12597277393
Orthologs

Orthologs in Compara


External References
Database Identifier Description
NBRP SPNCRNA.13 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPNCRNA.13 Retrieval of eukaryotic orthologs (Bähler Lab)
BioGrid SPNCRNA.13 BioGRID Interaction Datasets
Expression Viewer SPNCRNA.13 Cell Cycle Expression Profile (Bähler Lab)
Expression Viewer SPNCRNA.13 Meiosis/Sporulation Expression Profies (Bähler Lab)
Expression Viewer SPNCRNA.13 Pheromone response/mating expression profiles (Bähler Lab)
Expression Viewer SPNCRNA.13 Environmental stress expression profiles (Bähler Lab)
Pomb(A) SPNCRNA.13 Polyadenylation Viewer (Gullerova lab)
pombeTV SPNCRNA.13 Transcriptome Viewer (Bähler Lab)
Cyclebase SPNCRNA.13 Cell Cycle Data
GEO SPNCRNA.13 GEO profiles
PInt SPNCRNA.13 Protein-Protein Interaction Predictor (Bähler Lab)
European Nucleotide ArchiveAB084825ENA EMBL mapping

Literature for prl13

Search: Europe PMC or PubMed

Release Version: PomBase:21_41 - 24 Feb 2014