SPNCRNA.277


Gene Standard NameUnassigned Characterisation Status
Systematic IDSPNCRNA.277 Feature TypencRNA
SynonymsSPNG1054 Name Description
Productnon-coding RNA (predicted) Product Size697nt
Genomic Location Chromosome I, 5478402-5479098, 697nt

Ensembl Gene Location
Transcript
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
154784025479098

UTRs

Region Coordinates Reference
exon5478402..5479098PMID:18488015
ncRNA5478402..5479098PMID:18488015
Sequence
Gene Expression

Quantitative Gene Expression

RNA Level

Molecules/Cell (average)DuringConditionScaleEvidenceReference
0.098during GO:0072690PECO:0000014,
PECO:0000005
experimental evidencePMID:23101633
0.029during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000014,
PECO:0000127,
PECO:0000005
experimental evidencePMID:23101633
Warning
DescriptionQualifierReferenceCount
no detectable long open reading frame393
this transcript could be on either strand262
Orthologs

Orthologs in Compara


External References
Database Identifier Description
NBRP SPNCRNA.277 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPNCRNA.277 Retrieval of eukaryotic orthologs (Bähler Lab)
BioGrid SPNCRNA.277 BioGRID Interaction Datasets
Expression Viewer SPNCRNA.277 Cell Cycle Expression Profile (Bähler Lab)
Expression Viewer SPNCRNA.277 Meiosis/Sporulation Expression Profies (Bähler Lab)
Expression Viewer SPNCRNA.277 Pheromone response/mating expression profiles (Bähler Lab)
Expression Viewer SPNCRNA.277 Environmental stress expression profiles (Bähler Lab)
Pomb(A) SPNCRNA.277 Polyadenylation Viewer (Gullerova lab)
pombeTV SPNCRNA.277 Transcriptome Viewer (Bähler Lab)
Cyclebase SPNCRNA.277 Cell Cycle Data
GEO SPNCRNA.277 GEO profiles
PInt SPNCRNA.277 Protein-Protein Interaction Predictor (Bähler Lab)
PeptideAtlas SPNCRNA.277 Peptides identified in tandem mass spectrometry proteomics experiments
PUBMED18488015

Literature for SPNCRNA.277

Search: Europe PMC or PubMed

Release Version: PomBase:22_45 - 08 Aug 2014