prl40 (SPNCRNA.40)

Gene Standard Nameprl40 ChromosomeIII
Systematic IDSPNCRNA.40 Gene Start2391631
Synonyms Gene End2391821
Productnon-coding RNA, poly(A)-bearing (predicted) Gene Length191
Feature TypencRNA CDS Start
Name Description CDS End
Characterisation Status CDS Length

Ensembl Gene Location
  1. SPCC1827.04
  2. SPCC1827.05c
  3. SPCC1827.06c
  4. SPNCRNA.1294
  5. SPCC1827.07c
  6. prl40
  7. ppk38
  8. mug170
  9. pal1
  10. are2
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
123916312391821

References

Region Start End Reference
ncRNA23916312391821PMID:12597277
exon23916312391821PMID:12597277
ncRNA23916312391821PMID:12597277
exon23916312391821PMID:12597277
Sequence
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Gene Expression
DescriptionEvidenceDuringConditionRangeAverage per CellReference
protein levelexperimental evidencePECO:0000005,
PECO:0000014		population_widePMID:23101633
experimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127		population_widePMID:23101633
RNA levelexperimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000127,
PECO:0000014,
PECO:0000005		population_wide0.085PMID:23101633
experimental evidencePECO:0000005,
PECO:0000014		population_widePMID:23101633
Warning
DescriptionQualifierReference
no detectable long open reading frameInferred from Sequence or Structural Similarity PMID:12597277
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External References
Database Identifier Description
NBRP SPNCRNA.40 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPNCRNA.40 Retrieval of eukaryotic orthologs
BioGrid SPNCRNA.40 BioGRID Interaction Datasets
Bähler Lab SPNCRNA.40 Cell Cycle Expression Profile
Bähler Lab SPNCRNA.40 Meiosis/Sporulation Expression Profies
Bähler Lab SPNCRNA.40 Pheromone response/mating expression profiles
Bähler Lab SPNCRNA.40 Environmental stress expression profiles
Bähler Lab SPNCRNA.40 Bähler Lab Transcriptome Viewer
Cyclebase SPNCRNA.40 Cell Cycle Data
PInt SPNCRNA.40 Bähler Lab Protein-Protein Interaction Predictor
Entrez Gene SPNCRNA.40 Entrez Gene
European Nucleotide ArchiveAB084852ENA EMBL mapping

Literature for prl40
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Search: UK PMC or PubMed

Release Version: PomBase:18_35 - 11 May 2013