prl53 (SPNCRNA.53)


Gene Standard Nameprl53 Characterisation Status
Systematic IDSPNCRNA.53 Feature TypencRNA
Synonymsprl49, prl63, SPNCRNA.49, SPNCRNA.63 Name Description
Productnon-coding RNA, poly(A)-bearing (predicted) Product Size1852nt
Genomic Location Chromosome I, 4009905-4008054, 1852nt

Ensembl Gene Location
Transcript
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
140099054008054

UTRs

Region Coordinates Reference
exon4009905..4008054PMID:12597277
ncRNA4009905..4008054PMID:12597277
Sequence
Gene Expression

Quantitative Gene Expression

RNA Level

Molecules/Cell (average)DuringConditionScaleEvidenceReference
200during GO:0072690PECO:0000014,
PECO:0000005
experimental evidencePMID:23101633
32during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000014,
PECO:0000127,
PECO:0000005
experimental evidencePMID:23101633
Warning
DescriptionQualifierReferenceCount
no detectable long open reading frameInferred from Sequence or Structural Similarity PMID:12597277393
Orthologs

Orthologs in Compara


External References
Database Identifier Description
NBRP SPNCRNA.53 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPNCRNA.53 Retrieval of eukaryotic orthologs (Bähler Lab)
BioGrid SPNCRNA.53 BioGRID Interaction Datasets
Expression Viewer SPNCRNA.53 Cell Cycle Expression Profile (Bähler Lab)
Expression Viewer SPNCRNA.53 Meiosis/Sporulation Expression Profies (Bähler Lab)
Expression Viewer SPNCRNA.53 Pheromone response/mating expression profiles (Bähler Lab)
Expression Viewer SPNCRNA.53 Environmental stress expression profiles (Bähler Lab)
Pomb(A) SPNCRNA.53 Polyadenylation Viewer (Gullerova lab)
pombeTV SPNCRNA.53 Transcriptome Viewer (Bähler Lab)
Cyclebase SPNCRNA.53 Cell Cycle Data
GEO SPNCRNA.53 GEO profiles
PInt SPNCRNA.53 Protein-Protein Interaction Predictor (Bähler Lab)
PUBMED12597277
European Nucleotide ArchiveAB084861ENA EMBL mapping
European Nucleotide ArchiveAB084865ENA EMBL mapping
European Nucleotide ArchiveAB084875ENA EMBL mapping

Literature for prl53

Search: Europe PMC or PubMed

Release Version: PomBase:22_44 - 08 Jul 2014