prl54 (SPNCRNA.54)

Gene Standard Nameprl54 ChromosomeI
Systematic IDSPNCRNA.54 Gene Start4820804
Synonyms Gene End4821352
Productnon-coding RNA, poly(A)-bearing (predicted) Gene Length549
Feature TypencRNA CDS Start
Name Description CDS End
Characterisation Status CDS Length

Ensembl Gene Location
  1. fus1
  2. SPNCRNA.1026
  3. hri1
  4. prl54
  5. hus1
  6. SPNCRNA.1027
  7. SPAC20G4.05c
  8. adf1
  9. SPAC20G4.09
  10. sts1
Transcript
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Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
148208044821352

References

Region Start End Reference
ncRNA48208044821352PMID:12597277
exon48208044821352PMID:12597277
Sequence
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Gene Expression
DescriptionEvidenceDuringConditionRangeAverage per CellReference
protein levelexperimental evidencevegetative growth of a single-celled organismPECO:0000005,
PECO:0000014		population_widePMID:23101633
experimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127		population_widePMID:23101633
RNA levelexperimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000127,
PECO:0000014,
PECO:0000005		population_wide0.095PMID:23101633
experimental evidencevegetative growth of a single-celled organismPECO:0000014,
PECO:0000005		population_wide0.16PMID:23101633
Warning
DescriptionQualifierReference
no detectable long open reading frameInferred from Sequence or Structural Similarity PMID:12597277
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External References
Database Identifier Description
NBRP SPNCRNA.54 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPNCRNA.54 Retrieval of eukaryotic orthologs
BioGrid SPNCRNA.54 BioGRID Interaction Datasets
Bähler Lab SPNCRNA.54 Cell Cycle Expression Profile
Bähler Lab SPNCRNA.54 Meiosis/Sporulation Expression Profies
Bähler Lab SPNCRNA.54 Pheromone response/mating expression profiles
Bähler Lab SPNCRNA.54 Environmental stress expression profiles
Bähler Lab SPNCRNA.54 Bähler Lab Transcriptome Viewer
Cyclebase SPNCRNA.54 Cell Cycle Data
PInt SPNCRNA.54 Bähler Lab Protein-Protein Interaction Predictor
Entrez Gene SPNCRNA.54 Entrez Gene
European Nucleotide ArchiveAB084866ENA EMBL mapping

Literature for prl54
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Search: UK PMC or PubMed

Release Version: PomBase:18.34 - 04 Apr 2013