srp7 (SPNCRNA.98)

Gene Standard Namesrp7 ChromosomeI
Systematic IDSPNCRNA.98 Gene Start4268566
Synonymssrp Gene End4269064
Product7SL signal recognition particle component Gene Length499
Feature TypencRNA CDS Start
Name Description CDS End
Characterisation Status CDS Length

Ensembl Gene Location
  1. lcb2
  2. smd2
  3. SPATRNASER.03
  4. SPATRNAMET.03
  5. SPAC2C4.04c
  6. SPAC2C4.05
  7. srp7
  8. SPAC2C4.06c
  9. dis32
  10. SPAC2C4.08
  11. SPAC2C4.09
GO Biological Process

Ontology Graph

Contact Curators
Term IDTerm NameEvidenceWith/FromReference
GO:0006614SRP-dependent cotranslational protein targeting to membraneTASPMID:8041618
GO Cellular Component

Ontology Graph

Contact Curators
Term IDTerm NameEvidenceWith/FromReference
GO:0005786signal recognition particle, endoplasmic reticulum targetingIDAPMID:8041618
IMPPMID:1315954
Transcript
Contact Curators
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
142685664269064
Sequence
Contact Curators
Gene Expression
DescriptionEvidenceDuringConditionRangeAverage per CellReference
protein levelexperimental evidencesingle-celled organism vegetative growth phasePECO:0000005,
PECO:0000014		population_widePMID:23101633
experimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127		population_widePMID:23101633
RNA levelexperimental evidencesingle-celled organism vegetative growth phasePECO:0000014,
PECO:0000005		population_wide1300PMID:23101633
experimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000127,
PECO:0000014,
PECO:0000005		population_wide280PMID:23101633
Contact Curators
Physical Interactions

Source: BioGRID

Gene Product Evidence Reference
smn1SMN family protein Smn1 Affinity Capture-RNAPMID:23221635
Contact Curators
External References
Database Identifier Description
NBRP SPNCRNA.98 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPNCRNA.98 Retrieval of eukaryotic orthologs
BioGrid SPNCRNA.98 BioGRID Interaction Datasets
Bähler Lab SPNCRNA.98 Cell Cycle Expression Profile
Bähler Lab SPNCRNA.98 Meiosis/Sporulation Expression Profies
Bähler Lab SPNCRNA.98 Pheromone response/mating expression profiles
Bähler Lab SPNCRNA.98 Environmental stress expression profiles
Bähler Lab SPNCRNA.98 Bähler Lab Transcriptome Viewer
Cyclebase SPNCRNA.98 Cell Cycle Data
PInt SPNCRNA.98 Bähler Lab Protein-Protein Interaction Predictor
Entrez Gene SPNCRNA.98 Entrez Gene
RfamRF00017Rfam hosted at the Wellcome Trust Sanger Institute
European Nucleotide ArchiveX15220ENA EMBL mapping

Literature for srp7
Contact Curators

Search: UK PMC or PubMed

Release Version: PomBase:18_35 - 11 May 2013