SPRRNA.15

Gene Standard NameUnassigned ChromosomeI
Systematic IDSPRRNA.15 Gene Start3548049
Synonyms Gene End3547889
Product5S rRNA Gene Length161
Feature TyperRNA CDS Start
Name Description CDS End
Characterisation Status CDS Length

Ensembl Gene Location
  1. SPAC1B1.02c
  2. kap95
  3. SPNCRNA.915
  4. SPAC1B1.04c
  5. SPRRNA.15
  6. bsu1
  7. SPAC17A2.02c
  8. SPNCRNA.916
  9. vma6
GO Molecular Function

Ontology Graph

Contact Curators
Term IDTerm NameEvidenceWith/FromReference
GO:0003735structural constituent of ribosomeRCAGO_REF:0000001
GO Biological Process

Ontology Graph

Contact Curators
Term IDTerm NameEvidenceWith/FromReference
GO:0002181cytoplasmic translationNASGO_REF:0000051
GO Cellular Component

Ontology Graph

Contact Curators
Term IDTerm NameEvidenceWith/FromReference
GO:0022626cytosolic ribosomeRCAGO_REF:0000001
Transcript
Contact Curators
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
135480493547889
Sequence
Contact Curators
Gene Expression
DescriptionEvidenceDuringConditionRangeAverage per CellReference
protein levelexperimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127		population_widePMID:23101633
experimental evidencesingle-celled organism vegetative growth phasePECO:0000005,
PECO:0000014		population_widePMID:23101633
RNA levelexperimental evidencesingle-celled organism vegetative growth phasePECO:0000014,
PECO:0000005		population_wide1100PMID:23101633
experimental evidencecell quiescence following G1 arrest due to nitrogen limitationPECO:0000127,
PECO:0000014,
PECO:0000005		population_wide180PMID:23101633
Contact Curators
External References
Database Identifier Description
NBRP SPRRNA.15 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPRRNA.15 Retrieval of eukaryotic orthologs
BioGrid SPRRNA.15 BioGRID Interaction Datasets
Bähler Lab SPRRNA.15 Cell Cycle Expression Profile
Bähler Lab SPRRNA.15 Meiosis/Sporulation Expression Profies
Bähler Lab SPRRNA.15 Pheromone response/mating expression profiles
Bähler Lab SPRRNA.15 Environmental stress expression profiles
Bähler Lab SPRRNA.15 Bähler Lab Transcriptome Viewer
Cyclebase SPRRNA.15 Cell Cycle Data
PInt SPRRNA.15 Bähler Lab Protein-Protein Interaction Predictor
Entrez Gene SPRRNA.15 Entrez Gene

Literature for SPRRNA.15
Contact Curators

Search: UK PMC or PubMed

Release Version: PomBase:18_35 - 11 May 2013