SPRRNA.26


Gene Standard NameUnassigned Characterisation Status
Systematic IDSPRRNA.26 Feature TyperRNA
Synonyms Name Description
Product5S rRNA Product Size187nt
Genomic Location Chromosome III, 926108-926294, 187nt

Ensembl Gene Location
GO Molecular Function
Term NameCount
structural constituent of ribosome255
Annotation ExtensionEvidenceWith/FromReference
GO Biological Process
Term NameCount
cytoplasmic translation459
Annotation ExtensionEvidenceWith/FromReference
GO Cellular Component
Term NameCount
cytosolic ribosome200
Annotation ExtensionEvidenceWith/FromReference
Transcript
Ensembl transcript structure with UTRs, exons and introns

Transcript Structure

Region Coordinates Reference
Exons926108..926294
CDS926108..926294
Sequence
Gene Expression

Quantitative Gene Expression

RNA Level

Molecules/Cell (average)ExtensionConditionScaleEvidenceReference
5500during GO:0072690PECO:0000005,
PECO:0000014
population wideexperimental evidencePMID:23101633
730during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000005,
PECO:0000014,
PECO:0000127
population wideexperimental evidencePMID:23101633
External References
Database Identifier Description
NBRP SPRRNA.26 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPRRNA.26 Retrieval of eukaryotic orthologs (Bähler Lab)
BioGrid SPRRNA.26 BioGRID Interaction Datasets
Expression Viewer SPRRNA.26 Cell Cycle Expression Profile (Bähler Lab)
Expression Viewer SPRRNA.26 Meiosis/Sporulation Expression Profies (Bähler Lab)
Expression Viewer SPRRNA.26 Pheromone response/mating expression profiles (Bähler Lab)
Expression Viewer SPRRNA.26 Environmental stress expression profiles (Bähler Lab)
Pomb(A) SPRRNA.26 Polyadenylation Viewer (Gullerova lab)
pombeTV SPRRNA.26 Transcriptome Viewer (Bähler Lab)
GEO SPRRNA.26 GEO profiles
PInt SPRRNA.26 Protein-Protein Interaction Predictor (Bähler Lab)
PeptideAtlas SPRRNA.26 Peptides identified in tandem mass spectrometry proteomics experiments
SYSGRO SPRRNA.26 Fission yeast phenotypic data & analysis
Cyclebase SPRRNA.26.1 Cell Cycle Data

Literature for SPRRNA.26

Search: Europe PMC or PubMed

Release Version: PomBase:26_51 - 07 Apr 2015