SPRRNA.26


Gene Standard NameUnassigned Characterisation Status
Systematic IDSPRRNA.26 Feature TyperRNA
Synonyms Name Description
Product5S rRNA Product Size187nt
Genomic Location Chromosome III, 926108-926294, 187nt

Ensembl Gene Location
GO Molecular Function
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0003735structural constituent of ribosomeRCAGO_REF:0000001255
GO Biological Process
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0002181cytoplasmic translationNASGO_REF:0000051445
GO Cellular Component
Term IDTerm NameEvidenceWith/FromReferenceCount
GO:0022626cytosolic ribosomeRCAGO_REF:0000001199
Transcript
Ensembl transcript structure with UTRs, exons and introns

Exons

Exon Start End
1926108926294
Sequence
Gene Expression

Quantitative Gene Expression

RNA Level

Molecules/Cell (average)DuringConditionScaleEvidenceReference
5500during GO:0072690PECO:0000014,
PECO:0000005
experimental evidencePMID:23101633
730during cell quiescence following G1 arrest due to nitrogen limitationPECO:0000014,
PECO:0000127,
PECO:0000005
experimental evidencePMID:23101633
Orthologs

Orthologs in Compara


External References
Database Identifier Description
NBRP SPRRNA.26 Fission yeast strain database, National BioResource Project (Japan)
YOGY SPRRNA.26 Retrieval of eukaryotic orthologs (Bähler Lab)
BioGrid SPRRNA.26 BioGRID Interaction Datasets
Expression Viewer SPRRNA.26 Cell Cycle Expression Profile (Bähler Lab)
Expression Viewer SPRRNA.26 Meiosis/Sporulation Expression Profies (Bähler Lab)
Expression Viewer SPRRNA.26 Pheromone response/mating expression profiles (Bähler Lab)
Expression Viewer SPRRNA.26 Environmental stress expression profiles (Bähler Lab)
Pomb(A) SPRRNA.26 Polyadenylation Viewer (Gullerova lab)
pombeTV SPRRNA.26 Transcriptome Viewer (Bähler Lab)
Cyclebase SPRRNA.26 Cell Cycle Data
GEO SPRRNA.26 GEO profiles
PInt SPRRNA.26 Protein-Protein Interaction Predictor (Bähler Lab)

Literature for SPRRNA.26

Search: Europe PMC or PubMed

Release Version: PomBase:22_44 - 08 Jul 2014