Sequencing Status

Note: Many older S. pombe sequence submissions to the DNA databases (International Nucleotide Sequence Database Collaboration databases, i.e. ENA, GenBank, DDBJ) contain one or more errors, and we do not have the resources to maintain past sequences or flag every error in PomBase.

Chromosome 1

Contig Name Region Size
  unsequenced to chr1 left telomere 10 kb ± 2 kb*
c212 sub-telomeric left arm 29,663 bp
  Gap <5kb*
c977 left arm and right arm 5,549,370 bp
  unsequenced to chr1 left telomere 18kb ± 3kb*

 

Chromosome 2

Contig Name Region Size
  unsequenced to chr2 left telomere 25kb ± 5kb*
c1348 sub-telomeric left arm 80,201bp
  Gap 22kb ± 5kb*
pB10D8 left arm to centromeric gap 1,536,269 bp
  Gap ~6kb
pJ5566 right arm from centromeric gap to telomeric repeats 2,923,134 bp

 

Chromosome 3

Contig Name Region Size
p20C8 left arm from centromeric gap 1,083,348 bp
  Gap 25.3kb ± 6kb**
c1676 right arm from centromeric gap 1,369,435 bp

* pers comm. Randy Hyppa and Gerry Smith.
** pers comm. Chad Ellermeier and Gerry Smith.

Centromere clone information

Telomere clone information

Mating type region information

Ribosomal DNA information (FAQ)